Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02334:02333
Extra
PDB:
ATOM 1 O3' U A2333 58.444 99.558 116.065 1.00 35.55 O
ATOM 2 P C A2334 58.290 99.715 117.659 1.00 36.16 P
ATOM 3 OP1 C A2334 57.727 98.433 118.161 1.00 33.20 O
ATOM 4 OP2 C A2334 57.597 100.996 117.966 1.00 34.43 O
ATOM 5 O5' C A2334 59.792 99.825 118.168 1.00 34.94 O
ATOM 6 C5' C A2334 60.779 98.882 117.737 1.00 33.54 C
ATOM 7 C4' C A2334 62.151 99.425 118.011 1.00 35.44 C
ATOM 8 O4' C A2334 62.362 100.616 117.191 1.00 37.24 O
ATOM 9 C3' C A2334 62.382 99.873 119.457 1.00 36.18 C
ATOM 10 O3' C A2334 63.737 99.603 119.794 1.00 37.71 O
ATOM 11 C2' C A2334 62.223 101.388 119.349 1.00 36.05 C
ATOM 12 O2' C A2334 62.857 102.148 120.356 1.00 35.47 O
ATOM 13 C1' C A2334 62.905 101.622 118.008 1.00 36.18 C
ATOM 14 N1 C A2334 62.727 102.953 117.401 1.00 36.60 N
ATOM 15 C2 C A2334 61.461 103.575 117.420 1.00 38.45 C
ATOM 16 O2 C A2334 60.465 102.925 117.800 1.00 38.75 O
ATOM 17 N3 C A2334 61.360 104.867 117.015 1.00 37.80 N
ATOM 18 C4 C A2334 62.444 105.517 116.580 1.00 35.70 C
ATOM 19 N4 C A2334 62.314 106.809 116.267 1.00 35.18 N
ATOM 20 C5 C A2334 63.712 104.877 116.463 1.00 35.49 C
ATOM 21 C6 C A2334 63.806 103.608 116.877 1.00 35.47 C
ATOM 22 P G A2335 64.118 98.272 120.599 1.00 37.59 P
ATOM 23 OP1 G A2335 63.201 97.185 120.175 1.00 37.07 O
ATOM 24 OP2 G A2335 64.226 98.621 122.038 1.00 36.80 O
ATOM 25 O5' G A2335 65.573 97.936 120.048 1.00 37.71 O
TER
ATOM 1 O3' G B2332 54.718 103.589 113.519 1.00 32.50 O
ATOM 2 P U B2333 55.347 103.545 114.998 1.00 32.60 P
ATOM 3 OP1 U B2333 54.348 102.873 115.860 1.00 33.47 O
ATOM 4 OP2 U B2333 55.825 104.900 115.364 1.00 33.20 O
ATOM 5 O5' U B2333 56.617 102.604 114.831 1.00 30.61 O
ATOM 6 C5' U B2333 56.489 101.295 114.263 1.00 31.73 C
ATOM 7 C4' U B2333 57.851 100.699 114.041 1.00 33.21 C
ATOM 8 O4' U B2333 58.570 101.496 113.071 1.00 34.93 O
ATOM 9 C3' U B2333 58.745 100.694 115.263 1.00 33.48 C
ATOM 10 O3' U B2333 58.444 99.558 116.065 1.00 35.55 O
ATOM 11 C2' U B2333 60.140 100.655 114.646 1.00 34.03 C
ATOM 12 O2' U B2333 60.524 99.370 114.200 1.00 32.11 O
ATOM 13 C1' U B2333 59.945 101.535 113.410 1.00 34.92 C
ATOM 14 N1 U B2333 60.349 102.946 113.534 1.00 36.15 N
ATOM 15 C2 U B2333 61.683 103.275 113.297 1.00 36.16 C
ATOM 16 O2 U B2333 62.554 102.446 113.091 1.00 35.14 O
ATOM 17 N3 U B2333 61.959 104.618 113.321 1.00 36.07 N
ATOM 18 C4 U B2333 61.076 105.646 113.574 1.00 37.06 C
ATOM 19 O4 U B2333 61.450 106.814 113.423 1.00 38.00 O
ATOM 20 C5 U B2333 59.738 105.222 113.869 1.00 37.33 C
ATOM 21 C6 U B2333 59.429 103.923 113.840 1.00 36.08 C
ATOM 22 P C B2334 58.290 99.715 117.659 1.00 36.16 P
ATOM 23 OP1 C B2334 57.727 98.433 118.161 1.00 33.20 O
ATOM 24 OP2 C B2334 57.597 100.996 117.966 1.00 34.43 O
ATOM 25 O5' C B2334 59.792 99.825 118.168 1.00 34.94 O
TER
ATOM 2 P C A2334 58.290 99.715 117.659 1.00 36.16 P
ATOM 3 OP1 C A2334 57.727 98.433 118.161 1.00 33.20 O
ATOM 4 OP2 C A2334 57.597 100.996 117.966 1.00 34.43 O
ATOM 5 O5' C A2334 59.792 99.825 118.168 1.00 34.94 O
ATOM 6 C5' C A2334 60.779 98.882 117.737 1.00 33.54 C
ATOM 7 C4' C A2334 62.151 99.425 118.011 1.00 35.44 C
ATOM 8 O4' C A2334 62.362 100.616 117.191 1.00 37.24 O
ATOM 9 C3' C A2334 62.382 99.873 119.457 1.00 36.18 C
ATOM 10 O3' C A2334 63.737 99.603 119.794 1.00 37.71 O
ATOM 11 C2' C A2334 62.223 101.388 119.349 1.00 36.05 C
ATOM 12 O2' C A2334 62.857 102.148 120.356 1.00 35.47 O
ATOM 13 C1' C A2334 62.905 101.622 118.008 1.00 36.18 C
ATOM 14 N1 C A2334 62.727 102.953 117.401 1.00 36.60 N
ATOM 15 C2 C A2334 61.461 103.575 117.420 1.00 38.45 C
ATOM 16 O2 C A2334 60.465 102.925 117.800 1.00 38.75 O
ATOM 17 N3 C A2334 61.360 104.867 117.015 1.00 37.80 N
ATOM 18 C4 C A2334 62.444 105.517 116.580 1.00 35.70 C
ATOM 19 N4 C A2334 62.314 106.809 116.267 1.00 35.18 N
ATOM 20 C5 C A2334 63.712 104.877 116.463 1.00 35.49 C
ATOM 21 C6 C A2334 63.806 103.608 116.877 1.00 35.47 C
ATOM 22 P G A2335 64.118 98.272 120.599 1.00 37.59 P
ATOM 23 OP1 G A2335 63.201 97.185 120.175 1.00 37.07 O
ATOM 24 OP2 G A2335 64.226 98.621 122.038 1.00 36.80 O
ATOM 25 O5' G A2335 65.573 97.936 120.048 1.00 37.71 O
TER
ATOM 1 O3' G B2332 54.718 103.589 113.519 1.00 32.50 O
ATOM 2 P U B2333 55.347 103.545 114.998 1.00 32.60 P
ATOM 3 OP1 U B2333 54.348 102.873 115.860 1.00 33.47 O
ATOM 4 OP2 U B2333 55.825 104.900 115.364 1.00 33.20 O
ATOM 5 O5' U B2333 56.617 102.604 114.831 1.00 30.61 O
ATOM 6 C5' U B2333 56.489 101.295 114.263 1.00 31.73 C
ATOM 7 C4' U B2333 57.851 100.699 114.041 1.00 33.21 C
ATOM 8 O4' U B2333 58.570 101.496 113.071 1.00 34.93 O
ATOM 9 C3' U B2333 58.745 100.694 115.263 1.00 33.48 C
ATOM 10 O3' U B2333 58.444 99.558 116.065 1.00 35.55 O
ATOM 11 C2' U B2333 60.140 100.655 114.646 1.00 34.03 C
ATOM 12 O2' U B2333 60.524 99.370 114.200 1.00 32.11 O
ATOM 13 C1' U B2333 59.945 101.535 113.410 1.00 34.92 C
ATOM 14 N1 U B2333 60.349 102.946 113.534 1.00 36.15 N
ATOM 15 C2 U B2333 61.683 103.275 113.297 1.00 36.16 C
ATOM 16 O2 U B2333 62.554 102.446 113.091 1.00 35.14 O
ATOM 17 N3 U B2333 61.959 104.618 113.321 1.00 36.07 N
ATOM 18 C4 U B2333 61.076 105.646 113.574 1.00 37.06 C
ATOM 19 O4 U B2333 61.450 106.814 113.423 1.00 38.00 O
ATOM 20 C5 U B2333 59.738 105.222 113.869 1.00 37.33 C
ATOM 21 C6 U B2333 59.429 103.923 113.840 1.00 36.08 C
ATOM 22 P C B2334 58.290 99.715 117.659 1.00 36.16 P
ATOM 23 OP1 C B2334 57.727 98.433 118.161 1.00 33.20 O
ATOM 24 OP2 C B2334 57.597 100.996 117.966 1.00 34.43 O
ATOM 25 O5' C B2334 59.792 99.825 118.168 1.00 34.94 O
TER
Atoms:
C2: (61.461,103.575,117.420)
OP1: (57.727,98.433,118.161)
OP2: (57.597,100.996,117.966)
C4: (62.444,105.517,116.580)
O5': (59.792,99.825,118.168)
C3': (62.382,99.873,119.457)
C1': (62.905,101.622,118.008)
O4': (62.362,100.616,117.191)
C5': (60.779,98.882,117.737)
P: (58.290,99.715,117.659)
O2: (60.465,102.925,117.800)
C4': (62.151,99.425,118.011)
C2': (62.223,101.388,119.349)
O2': (62.857,102.148,120.356)
N1: (62.727,102.953,117.401)
N3: (61.360,104.867,117.015)
N4: (62.314,106.809,116.267)
C6: (63.806,103.608,116.877)
C5: (63.712,104.877,116.463)
O3': (63.737,99.603,119.794)
OP1: (57.727,98.433,118.161)
OP2: (57.597,100.996,117.966)
C4: (62.444,105.517,116.580)
O5': (59.792,99.825,118.168)
C3': (62.382,99.873,119.457)
C1': (62.905,101.622,118.008)
O4': (62.362,100.616,117.191)
C5': (60.779,98.882,117.737)
P: (58.290,99.715,117.659)
O2: (60.465,102.925,117.800)
C4': (62.151,99.425,118.011)
C2': (62.223,101.388,119.349)
O2': (62.857,102.148,120.356)
N1: (62.727,102.953,117.401)
N3: (61.360,104.867,117.015)
N4: (62.314,106.809,116.267)
C6: (63.806,103.608,116.877)
C5: (63.712,104.877,116.463)
O3': (63.737,99.603,119.794)
C4: (61.076,105.646,113.574)
N3: (61.959,104.618,113.321)
OP1: (54.348,102.873,115.860)
OP2: (55.825,104.900,115.364)
C2: (61.683,103.275,113.297)
C1': (59.945,101.535,113.410)
C3': (58.745,100.694,115.263)
O5': (56.617,102.604,114.831)
O4': (58.570,101.496,113.071)
C5': (56.489,101.295,114.263)
P: (55.347,103.545,114.998)
C4': (57.851,100.699,114.041)
C2': (60.140,100.655,114.646)
O2': (60.524,99.370,114.200)
N1: (60.349,102.946,113.534)
O4: (61.450,106.814,113.423)
O2: (62.554,102.446,113.091)
C6: (59.429,103.923,113.840)
C5: (59.738,105.222,113.869)
O3': (58.444,99.558,116.065)
N3: (61.959,104.618,113.321)
OP1: (54.348,102.873,115.860)
OP2: (55.825,104.900,115.364)
C2: (61.683,103.275,113.297)
C1': (59.945,101.535,113.410)
C3': (58.745,100.694,115.263)
O5': (56.617,102.604,114.831)
O4': (58.570,101.496,113.071)
C5': (56.489,101.295,114.263)
P: (55.347,103.545,114.998)
C4': (57.851,100.699,114.041)
C2': (60.140,100.655,114.646)
O2': (60.524,99.370,114.200)
N1: (60.349,102.946,113.534)
O4: (61.450,106.814,113.423)
O2: (62.554,102.446,113.091)
C6: (59.429,103.923,113.840)
C5: (59.738,105.222,113.869)
O3': (58.444,99.558,116.065)
Image (generated by PyMOL):