Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DLC:Y57:Y56
Extra
PDB:
ATOM 1 O3' C A 56 12.361 -1.633 129.569 1.00 31.88 O
ATOM 2 P U A 57 13.191 -2.966 129.269 1.00 32.10 P
ATOM 3 OP1 U A 57 14.406 -2.939 130.118 1.00 31.99 O
ATOM 4 OP2 U A 57 13.347 -3.123 127.811 1.00 32.45 O
ATOM 5 O5' U A 57 12.215 -4.151 129.720 1.00 32.28 O
ATOM 6 C5' U A 57 11.973 -4.462 131.085 1.00 32.21 C
ATOM 7 C4' U A 57 10.875 -5.509 131.168 1.00 32.50 C
ATOM 8 O4' U A 57 9.780 -5.167 130.279 1.00 32.64 O
ATOM 9 C3' U A 57 11.324 -6.914 130.778 1.00 32.62 C
ATOM 10 O3' U A 57 10.850 -7.843 131.740 1.00 32.31 O
ATOM 11 C2' U A 57 10.712 -7.151 129.400 1.00 32.73 C
ATOM 12 O2' U A 57 10.333 -8.496 129.184 1.00 33.28 O
ATOM 13 C1' U A 57 9.472 -6.266 129.442 1.00 32.87 C
ATOM 14 N1 U A 57 9.047 -5.782 128.087 1.00 32.73 N
ATOM 15 C2 U A 57 7.852 -6.234 127.545 1.00 32.77 C
ATOM 16 O2 U A 57 7.101 -7.013 128.109 1.00 32.57 O
ATOM 17 N3 U A 57 7.559 -5.729 126.297 1.00 32.87 N
ATOM 18 C4 U A 57 8.325 -4.843 125.553 1.00 32.75 C
ATOM 19 O4 U A 57 7.932 -4.475 124.450 1.00 33.09 O
ATOM 20 C5 U A 57 9.552 -4.419 126.180 1.00 32.63 C
ATOM 21 C6 U A 57 9.860 -4.895 127.395 1.00 32.74 C
ATOM 22 P C A 58 11.844 -8.389 132.864 1.00 32.09 P
ATOM 23 OP1 C A 58 11.076 -9.378 133.658 1.00 32.29 O
ATOM 24 OP2 C A 58 12.481 -7.224 133.526 1.00 32.02 O
ATOM 25 O5' C A 58 12.990 -9.146 132.038 1.00 32.48 O
TER
ATOM 1 P C B 56 11.676 0.028 125.071 1.00 33.62 P
ATOM 2 OP1 C B 56 10.736 0.262 123.950 1.00 33.75 O
ATOM 3 OP2 C B 56 12.958 0.773 125.128 1.00 33.65 O
ATOM 4 O5' C B 56 10.839 0.239 126.422 1.00 33.18 O
ATOM 5 C5' C B 56 11.473 0.719 127.605 1.00 33.00 C
ATOM 6 C4' C B 56 10.870 0.096 128.851 1.00 32.69 C
ATOM 7 O4' C B 56 9.430 0.255 128.848 1.00 32.71 O
ATOM 8 C3' C B 56 11.090 -1.400 128.982 1.00 32.45 C
ATOM 9 O3' C B 56 12.361 -1.633 129.569 1.00 31.88 O
ATOM 10 C2' C B 56 9.931 -1.805 129.890 1.00 32.42 C
ATOM 11 O2' C B 56 10.192 -1.579 131.261 1.00 32.26 O
ATOM 12 C1' C B 56 8.811 -0.885 129.420 1.00 32.62 C
ATOM 13 N1 C B 56 7.843 -1.512 128.435 1.00 32.98 N
ATOM 14 C2 C B 56 6.825 -2.377 128.889 1.00 32.89 C
ATOM 15 O2 C B 56 6.719 -2.638 130.096 1.00 32.82 O
ATOM 16 N3 C B 56 5.969 -2.920 127.980 1.00 32.86 N
ATOM 17 C4 C B 56 6.091 -2.633 126.680 1.00 32.81 C
ATOM 18 N4 C B 56 5.225 -3.194 125.830 1.00 32.73 N
ATOM 19 C5 C B 56 7.111 -1.758 126.197 1.00 32.86 C
ATOM 20 C6 C B 56 7.952 -1.231 127.096 1.00 32.77 C
ATOM 21 P U B 57 13.191 -2.966 129.269 1.00 32.10 P
ATOM 22 OP1 U B 57 14.406 -2.939 130.118 1.00 31.99 O
ATOM 23 OP2 U B 57 13.347 -3.123 127.811 1.00 32.45 O
ATOM 24 O5' U B 57 12.215 -4.151 129.720 1.00 32.28 O
TER
ATOM 2 P U A 57 13.191 -2.966 129.269 1.00 32.10 P
ATOM 3 OP1 U A 57 14.406 -2.939 130.118 1.00 31.99 O
ATOM 4 OP2 U A 57 13.347 -3.123 127.811 1.00 32.45 O
ATOM 5 O5' U A 57 12.215 -4.151 129.720 1.00 32.28 O
ATOM 6 C5' U A 57 11.973 -4.462 131.085 1.00 32.21 C
ATOM 7 C4' U A 57 10.875 -5.509 131.168 1.00 32.50 C
ATOM 8 O4' U A 57 9.780 -5.167 130.279 1.00 32.64 O
ATOM 9 C3' U A 57 11.324 -6.914 130.778 1.00 32.62 C
ATOM 10 O3' U A 57 10.850 -7.843 131.740 1.00 32.31 O
ATOM 11 C2' U A 57 10.712 -7.151 129.400 1.00 32.73 C
ATOM 12 O2' U A 57 10.333 -8.496 129.184 1.00 33.28 O
ATOM 13 C1' U A 57 9.472 -6.266 129.442 1.00 32.87 C
ATOM 14 N1 U A 57 9.047 -5.782 128.087 1.00 32.73 N
ATOM 15 C2 U A 57 7.852 -6.234 127.545 1.00 32.77 C
ATOM 16 O2 U A 57 7.101 -7.013 128.109 1.00 32.57 O
ATOM 17 N3 U A 57 7.559 -5.729 126.297 1.00 32.87 N
ATOM 18 C4 U A 57 8.325 -4.843 125.553 1.00 32.75 C
ATOM 19 O4 U A 57 7.932 -4.475 124.450 1.00 33.09 O
ATOM 20 C5 U A 57 9.552 -4.419 126.180 1.00 32.63 C
ATOM 21 C6 U A 57 9.860 -4.895 127.395 1.00 32.74 C
ATOM 22 P C A 58 11.844 -8.389 132.864 1.00 32.09 P
ATOM 23 OP1 C A 58 11.076 -9.378 133.658 1.00 32.29 O
ATOM 24 OP2 C A 58 12.481 -7.224 133.526 1.00 32.02 O
ATOM 25 O5' C A 58 12.990 -9.146 132.038 1.00 32.48 O
TER
ATOM 1 P C B 56 11.676 0.028 125.071 1.00 33.62 P
ATOM 2 OP1 C B 56 10.736 0.262 123.950 1.00 33.75 O
ATOM 3 OP2 C B 56 12.958 0.773 125.128 1.00 33.65 O
ATOM 4 O5' C B 56 10.839 0.239 126.422 1.00 33.18 O
ATOM 5 C5' C B 56 11.473 0.719 127.605 1.00 33.00 C
ATOM 6 C4' C B 56 10.870 0.096 128.851 1.00 32.69 C
ATOM 7 O4' C B 56 9.430 0.255 128.848 1.00 32.71 O
ATOM 8 C3' C B 56 11.090 -1.400 128.982 1.00 32.45 C
ATOM 9 O3' C B 56 12.361 -1.633 129.569 1.00 31.88 O
ATOM 10 C2' C B 56 9.931 -1.805 129.890 1.00 32.42 C
ATOM 11 O2' C B 56 10.192 -1.579 131.261 1.00 32.26 O
ATOM 12 C1' C B 56 8.811 -0.885 129.420 1.00 32.62 C
ATOM 13 N1 C B 56 7.843 -1.512 128.435 1.00 32.98 N
ATOM 14 C2 C B 56 6.825 -2.377 128.889 1.00 32.89 C
ATOM 15 O2 C B 56 6.719 -2.638 130.096 1.00 32.82 O
ATOM 16 N3 C B 56 5.969 -2.920 127.980 1.00 32.86 N
ATOM 17 C4 C B 56 6.091 -2.633 126.680 1.00 32.81 C
ATOM 18 N4 C B 56 5.225 -3.194 125.830 1.00 32.73 N
ATOM 19 C5 C B 56 7.111 -1.758 126.197 1.00 32.86 C
ATOM 20 C6 C B 56 7.952 -1.231 127.096 1.00 32.77 C
ATOM 21 P U B 57 13.191 -2.966 129.269 1.00 32.10 P
ATOM 22 OP1 U B 57 14.406 -2.939 130.118 1.00 31.99 O
ATOM 23 OP2 U B 57 13.347 -3.123 127.811 1.00 32.45 O
ATOM 24 O5' U B 57 12.215 -4.151 129.720 1.00 32.28 O
TER
Atoms:
C4: (8.325,-4.843,125.553)
N3: (7.559,-5.729,126.297)
OP1: (14.406,-2.939,130.118)
OP2: (13.347,-3.123,127.811)
C2: (7.852,-6.234,127.545)
C1': (9.472,-6.266,129.442)
C3': (11.324,-6.914,130.778)
O5': (12.215,-4.151,129.720)
O4': (9.780,-5.167,130.279)
C5': (11.973,-4.462,131.085)
P: (13.191,-2.966,129.269)
C4': (10.875,-5.509,131.168)
C2': (10.712,-7.151,129.400)
O2': (10.333,-8.496,129.184)
N1: (9.047,-5.782,128.087)
O4: (7.932,-4.475,124.450)
O2: (7.101,-7.013,128.109)
C6: (9.860,-4.895,127.395)
C5: (9.552,-4.419,126.180)
O3': (10.850,-7.843,131.740)
N3: (7.559,-5.729,126.297)
OP1: (14.406,-2.939,130.118)
OP2: (13.347,-3.123,127.811)
C2: (7.852,-6.234,127.545)
C1': (9.472,-6.266,129.442)
C3': (11.324,-6.914,130.778)
O5': (12.215,-4.151,129.720)
O4': (9.780,-5.167,130.279)
C5': (11.973,-4.462,131.085)
P: (13.191,-2.966,129.269)
C4': (10.875,-5.509,131.168)
C2': (10.712,-7.151,129.400)
O2': (10.333,-8.496,129.184)
N1: (9.047,-5.782,128.087)
O4: (7.932,-4.475,124.450)
O2: (7.101,-7.013,128.109)
C6: (9.860,-4.895,127.395)
C5: (9.552,-4.419,126.180)
O3': (10.850,-7.843,131.740)
C2: (6.825,-2.377,128.889)
OP1: (10.736,0.262,123.950)
OP2: (12.958,0.773,125.128)
C4: (6.091,-2.633,126.680)
O5': (10.839,0.239,126.422)
C3': (11.090,-1.400,128.982)
C1': (8.811,-0.885,129.420)
O4': (9.430,0.255,128.848)
C5': (11.473,0.719,127.605)
P: (11.676,0.028,125.071)
O2: (6.719,-2.638,130.096)
C4': (10.870,0.096,128.851)
C2': (9.931,-1.805,129.890)
O2': (10.192,-1.579,131.261)
N1: (7.843,-1.512,128.435)
N3: (5.969,-2.920,127.980)
N4: (5.225,-3.194,125.830)
C6: (7.952,-1.231,127.096)
C5: (7.111,-1.758,126.197)
O3': (12.361,-1.633,129.569)
OP1: (10.736,0.262,123.950)
OP2: (12.958,0.773,125.128)
C4: (6.091,-2.633,126.680)
O5': (10.839,0.239,126.422)
C3': (11.090,-1.400,128.982)
C1': (8.811,-0.885,129.420)
O4': (9.430,0.255,128.848)
C5': (11.473,0.719,127.605)
P: (11.676,0.028,125.071)
O2: (6.719,-2.638,130.096)
C4': (10.870,0.096,128.851)
C2': (9.931,-1.805,129.890)
O2': (10.192,-1.579,131.261)
N1: (7.843,-1.512,128.435)
N3: (5.969,-2.920,127.980)
N4: (5.225,-3.194,125.830)
C6: (7.952,-1.231,127.096)
C5: (7.111,-1.758,126.197)
O3': (12.361,-1.633,129.569)
Image (generated by PyMOL):