Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01828:01829
Extra
PDB:
ATOM 1 O3' A A1827 105.255 136.260 58.305 1.00 45.46 O
ATOM 2 P C A1828 106.703 136.952 58.273 1.00 43.75 P
ATOM 3 OP1 C A1828 106.545 138.314 58.825 1.00 44.55 O
ATOM 4 OP2 C A1828 107.276 136.776 56.923 1.00 43.69 O
ATOM 5 O5' C A1828 107.567 136.101 59.303 1.00 44.39 O
ATOM 6 C5' C A1828 107.236 136.079 60.704 1.00 44.47 C
ATOM 7 C4' C A1828 107.992 134.973 61.401 1.00 45.52 C
ATOM 8 O4' C A1828 107.669 133.705 60.773 1.00 46.36 O
ATOM 9 C3' C A1828 109.507 135.042 61.299 1.00 46.54 C
ATOM 10 O3' C A1828 110.038 135.942 62.268 1.00 48.81 O
ATOM 11 C2' C A1828 109.913 133.591 61.540 1.00 45.26 C
ATOM 12 O2' C A1828 109.829 133.179 62.888 1.00 45.74 O
ATOM 13 C1' C A1828 108.807 132.855 60.795 1.00 43.59 C
ATOM 14 N1 C A1828 109.156 132.481 59.415 1.00 40.97 N
ATOM 15 C2 C A1828 109.904 131.331 59.214 1.00 39.80 C
ATOM 16 O2 C A1828 110.359 130.729 60.200 1.00 40.25 O
ATOM 17 N3 C A1828 110.132 130.906 57.954 1.00 39.29 N
ATOM 18 C4 C A1828 109.680 131.610 56.920 1.00 38.38 C
ATOM 19 N4 C A1828 109.906 131.132 55.695 1.00 38.92 N
ATOM 20 C5 C A1828 108.972 132.828 57.095 1.00 39.63 C
ATOM 21 C6 C A1828 108.731 133.223 58.348 1.00 40.77 C
ATOM 22 P U A1829 111.334 136.822 61.916 1.00 46.56 P
ATOM 23 OP1 U A1829 112.526 135.941 62.065 1.00 44.00 O
ATOM 24 OP2 U A1829 111.226 138.062 62.712 1.00 40.86 O
ATOM 25 O5' U A1829 111.157 137.185 60.376 1.00 45.71 O
TER
ATOM 1 O3' C B1828 110.038 135.942 62.268 1.00 48.81 O
ATOM 2 P U B1829 111.334 136.822 61.916 1.00 46.56 P
ATOM 3 OP1 U B1829 112.526 135.941 62.065 1.00 44.00 O
ATOM 4 OP2 U B1829 111.226 138.062 62.712 1.00 40.86 O
ATOM 5 O5' U B1829 111.157 137.185 60.376 1.00 45.71 O
ATOM 6 C5' U B1829 111.844 138.316 59.816 1.00 47.45 C
ATOM 7 C4' U B1829 112.000 138.160 58.327 1.00 45.94 C
ATOM 8 O4' U B1829 112.819 136.988 58.061 1.00 45.33 O
ATOM 9 C3' U B1829 110.703 137.965 57.544 1.00 47.48 C
ATOM 10 O3' U B1829 110.836 138.541 56.249 1.00 49.24 O
ATOM 11 C2' U B1829 110.657 136.448 57.373 1.00 47.76 C
ATOM 12 O2' U B1829 109.888 136.024 56.263 1.00 46.75 O
ATOM 13 C1' U B1829 112.138 136.149 57.151 1.00 46.42 C
ATOM 14 N1 U B1829 112.540 134.751 57.368 1.00 45.28 N
ATOM 15 C2 U B1829 112.716 133.968 56.249 1.00 44.67 C
ATOM 16 O2 U B1829 112.572 134.396 55.114 1.00 46.84 O
ATOM 17 N3 U B1829 113.070 132.665 56.501 1.00 42.24 N
ATOM 18 C4 U B1829 113.267 132.078 57.730 1.00 41.91 C
ATOM 19 O4 U B1829 113.584 130.889 57.791 1.00 41.62 O
ATOM 20 C5 U B1829 113.075 132.950 58.841 1.00 43.49 C
ATOM 21 C6 U B1829 112.727 134.229 58.629 1.00 46.55 C
ATOM 22 P C B1830 110.712 140.132 56.052 1.00 52.26 P
ATOM 23 OP1 C B1830 110.199 140.743 57.311 1.00 48.47 O
ATOM 24 OP2 C B1830 109.997 140.363 54.757 1.00 47.90 O
ATOM 25 O5' C B1830 112.221 140.617 55.895 1.00 52.86 O
TER
ATOM 2 P C A1828 106.703 136.952 58.273 1.00 43.75 P
ATOM 3 OP1 C A1828 106.545 138.314 58.825 1.00 44.55 O
ATOM 4 OP2 C A1828 107.276 136.776 56.923 1.00 43.69 O
ATOM 5 O5' C A1828 107.567 136.101 59.303 1.00 44.39 O
ATOM 6 C5' C A1828 107.236 136.079 60.704 1.00 44.47 C
ATOM 7 C4' C A1828 107.992 134.973 61.401 1.00 45.52 C
ATOM 8 O4' C A1828 107.669 133.705 60.773 1.00 46.36 O
ATOM 9 C3' C A1828 109.507 135.042 61.299 1.00 46.54 C
ATOM 10 O3' C A1828 110.038 135.942 62.268 1.00 48.81 O
ATOM 11 C2' C A1828 109.913 133.591 61.540 1.00 45.26 C
ATOM 12 O2' C A1828 109.829 133.179 62.888 1.00 45.74 O
ATOM 13 C1' C A1828 108.807 132.855 60.795 1.00 43.59 C
ATOM 14 N1 C A1828 109.156 132.481 59.415 1.00 40.97 N
ATOM 15 C2 C A1828 109.904 131.331 59.214 1.00 39.80 C
ATOM 16 O2 C A1828 110.359 130.729 60.200 1.00 40.25 O
ATOM 17 N3 C A1828 110.132 130.906 57.954 1.00 39.29 N
ATOM 18 C4 C A1828 109.680 131.610 56.920 1.00 38.38 C
ATOM 19 N4 C A1828 109.906 131.132 55.695 1.00 38.92 N
ATOM 20 C5 C A1828 108.972 132.828 57.095 1.00 39.63 C
ATOM 21 C6 C A1828 108.731 133.223 58.348 1.00 40.77 C
ATOM 22 P U A1829 111.334 136.822 61.916 1.00 46.56 P
ATOM 23 OP1 U A1829 112.526 135.941 62.065 1.00 44.00 O
ATOM 24 OP2 U A1829 111.226 138.062 62.712 1.00 40.86 O
ATOM 25 O5' U A1829 111.157 137.185 60.376 1.00 45.71 O
TER
ATOM 1 O3' C B1828 110.038 135.942 62.268 1.00 48.81 O
ATOM 2 P U B1829 111.334 136.822 61.916 1.00 46.56 P
ATOM 3 OP1 U B1829 112.526 135.941 62.065 1.00 44.00 O
ATOM 4 OP2 U B1829 111.226 138.062 62.712 1.00 40.86 O
ATOM 5 O5' U B1829 111.157 137.185 60.376 1.00 45.71 O
ATOM 6 C5' U B1829 111.844 138.316 59.816 1.00 47.45 C
ATOM 7 C4' U B1829 112.000 138.160 58.327 1.00 45.94 C
ATOM 8 O4' U B1829 112.819 136.988 58.061 1.00 45.33 O
ATOM 9 C3' U B1829 110.703 137.965 57.544 1.00 47.48 C
ATOM 10 O3' U B1829 110.836 138.541 56.249 1.00 49.24 O
ATOM 11 C2' U B1829 110.657 136.448 57.373 1.00 47.76 C
ATOM 12 O2' U B1829 109.888 136.024 56.263 1.00 46.75 O
ATOM 13 C1' U B1829 112.138 136.149 57.151 1.00 46.42 C
ATOM 14 N1 U B1829 112.540 134.751 57.368 1.00 45.28 N
ATOM 15 C2 U B1829 112.716 133.968 56.249 1.00 44.67 C
ATOM 16 O2 U B1829 112.572 134.396 55.114 1.00 46.84 O
ATOM 17 N3 U B1829 113.070 132.665 56.501 1.00 42.24 N
ATOM 18 C4 U B1829 113.267 132.078 57.730 1.00 41.91 C
ATOM 19 O4 U B1829 113.584 130.889 57.791 1.00 41.62 O
ATOM 20 C5 U B1829 113.075 132.950 58.841 1.00 43.49 C
ATOM 21 C6 U B1829 112.727 134.229 58.629 1.00 46.55 C
ATOM 22 P C B1830 110.712 140.132 56.052 1.00 52.26 P
ATOM 23 OP1 C B1830 110.199 140.743 57.311 1.00 48.47 O
ATOM 24 OP2 C B1830 109.997 140.363 54.757 1.00 47.90 O
ATOM 25 O5' C B1830 112.221 140.617 55.895 1.00 52.86 O
TER
Atoms:
C2: (109.904,131.331,59.214)
OP1: (106.545,138.314,58.825)
OP2: (107.276,136.776,56.923)
C4: (109.680,131.610,56.920)
O5': (107.567,136.101,59.303)
C3': (109.507,135.042,61.299)
C1': (108.807,132.855,60.795)
O4': (107.669,133.705,60.773)
C5': (107.236,136.079,60.704)
P: (106.703,136.952,58.273)
O2: (110.359,130.729,60.200)
C4': (107.992,134.973,61.401)
C2': (109.913,133.591,61.540)
O2': (109.829,133.179,62.888)
N1: (109.156,132.481,59.415)
N3: (110.132,130.906,57.954)
N4: (109.906,131.132,55.695)
C6: (108.731,133.223,58.348)
C5: (108.972,132.828,57.095)
O3': (110.038,135.942,62.268)
OP1: (106.545,138.314,58.825)
OP2: (107.276,136.776,56.923)
C4: (109.680,131.610,56.920)
O5': (107.567,136.101,59.303)
C3': (109.507,135.042,61.299)
C1': (108.807,132.855,60.795)
O4': (107.669,133.705,60.773)
C5': (107.236,136.079,60.704)
P: (106.703,136.952,58.273)
O2: (110.359,130.729,60.200)
C4': (107.992,134.973,61.401)
C2': (109.913,133.591,61.540)
O2': (109.829,133.179,62.888)
N1: (109.156,132.481,59.415)
N3: (110.132,130.906,57.954)
N4: (109.906,131.132,55.695)
C6: (108.731,133.223,58.348)
C5: (108.972,132.828,57.095)
O3': (110.038,135.942,62.268)
C4: (113.267,132.078,57.730)
N3: (113.070,132.665,56.501)
OP1: (112.526,135.941,62.065)
OP2: (111.226,138.062,62.712)
C2: (112.716,133.968,56.249)
C1': (112.138,136.149,57.151)
C3': (110.703,137.965,57.544)
O5': (111.157,137.185,60.376)
O4': (112.819,136.988,58.061)
C5': (111.844,138.316,59.816)
P: (111.334,136.822,61.916)
C4': (112.000,138.160,58.327)
C2': (110.657,136.448,57.373)
O2': (109.888,136.024,56.263)
N1: (112.540,134.751,57.368)
O4: (113.584,130.889,57.791)
O2: (112.572,134.396,55.114)
C6: (112.727,134.229,58.629)
C5: (113.075,132.950,58.841)
O3': (110.836,138.541,56.249)
N3: (113.070,132.665,56.501)
OP1: (112.526,135.941,62.065)
OP2: (111.226,138.062,62.712)
C2: (112.716,133.968,56.249)
C1': (112.138,136.149,57.151)
C3': (110.703,137.965,57.544)
O5': (111.157,137.185,60.376)
O4': (112.819,136.988,58.061)
C5': (111.844,138.316,59.816)
P: (111.334,136.822,61.916)
C4': (112.000,138.160,58.327)
C2': (110.657,136.448,57.373)
O2': (109.888,136.024,56.263)
N1: (112.540,134.751,57.368)
O4: (113.584,130.889,57.791)
O2: (112.572,134.396,55.114)
C6: (112.727,134.229,58.629)
C5: (113.075,132.950,58.841)
O3': (110.836,138.541,56.249)
Image (generated by PyMOL):