Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:02334:02333
Extra
PDB:
ATOM 1 O3' U A2333 58.713 98.968 116.120 1.00 29.45 O
ATOM 2 P C A2334 58.584 99.075 117.720 1.00 31.86 P
ATOM 3 OP1 C A2334 58.103 97.755 118.195 1.00 28.03 O
ATOM 4 OP2 C A2334 57.833 100.313 118.080 1.00 27.61 O
ATOM 5 O5' C A2334 60.080 99.266 118.222 1.00 30.16 O
ATOM 6 C5' C A2334 61.120 98.386 117.786 1.00 28.32 C
ATOM 7 C4' C A2334 62.464 98.981 118.112 1.00 29.29 C
ATOM 8 O4' C A2334 62.686 100.155 117.274 1.00 29.74 O
ATOM 9 C3' C A2334 62.616 99.467 119.560 1.00 31.43 C
ATOM 10 O3' C A2334 63.937 99.200 120.000 1.00 32.51 O
ATOM 11 C2' C A2334 62.466 100.978 119.411 1.00 31.02 C
ATOM 12 O2' C A2334 63.054 101.773 120.423 1.00 30.62 O
ATOM 13 C1' C A2334 63.190 101.185 118.089 1.00 29.75 C
ATOM 14 N1 C A2334 62.988 102.504 117.466 1.00 30.22 N
ATOM 15 C2 C A2334 61.696 103.083 117.426 1.00 31.80 C
ATOM 16 O2 C A2334 60.700 102.398 117.753 1.00 31.24 O
ATOM 17 N3 C A2334 61.574 104.373 117.029 1.00 30.45 N
ATOM 18 C4 C A2334 62.656 105.062 116.659 1.00 28.24 C
ATOM 19 N4 C A2334 62.506 106.353 116.375 1.00 29.59 N
ATOM 20 C5 C A2334 63.946 104.464 116.589 1.00 28.88 C
ATOM 21 C6 C A2334 64.065 103.197 116.994 1.00 29.00 C
ATOM 22 P G A2335 64.284 97.788 120.672 1.00 33.86 P
ATOM 23 OP1 G A2335 63.273 96.799 120.234 1.00 33.12 O
ATOM 24 OP2 G A2335 64.490 98.039 122.127 1.00 34.37 O
ATOM 25 O5' G A2335 65.679 97.424 119.997 1.00 33.09 O
TER
ATOM 1 O3' G B2332 54.876 103.038 113.539 1.00 28.41 O
ATOM 2 P U B2333 55.424 103.007 115.052 1.00 29.80 P
ATOM 3 OP1 U B2333 54.353 102.332 115.838 1.00 29.43 O
ATOM 4 OP2 U B2333 55.891 104.353 115.464 1.00 27.67 O
ATOM 5 O5' U B2333 56.699 102.050 114.991 1.00 28.32 O
ATOM 6 C5' U B2333 56.608 100.731 114.425 1.00 28.40 C
ATOM 7 C4' U B2333 57.987 100.174 114.157 1.00 29.85 C
ATOM 8 O4' U B2333 58.666 100.996 113.170 1.00 29.97 O
ATOM 9 C3' U B2333 58.934 100.142 115.344 1.00 29.83 C
ATOM 10 O3' U B2333 58.713 98.968 116.120 1.00 29.45 O
ATOM 11 C2' U B2333 60.300 100.129 114.670 1.00 28.67 C
ATOM 12 O2' U B2333 60.651 98.844 114.192 1.00 32.62 O
ATOM 13 C1' U B2333 60.051 101.035 113.461 1.00 28.89 C
ATOM 14 N1 U B2333 60.455 102.443 113.614 1.00 28.73 N
ATOM 15 C2 U B2333 61.790 102.765 113.396 1.00 28.35 C
ATOM 16 O2 U B2333 62.654 101.930 113.170 1.00 26.69 O
ATOM 17 N3 U B2333 62.075 104.106 113.463 1.00 28.39 N
ATOM 18 C4 U B2333 61.195 105.131 113.741 1.00 28.18 C
ATOM 19 O4 U B2333 61.596 106.291 113.710 1.00 29.47 O
ATOM 20 C5 U B2333 59.853 104.715 114.001 1.00 27.62 C
ATOM 21 C6 U B2333 59.536 103.422 113.931 1.00 27.59 C
ATOM 22 P C B2334 58.584 99.075 117.720 1.00 31.86 P
ATOM 23 OP1 C B2334 58.103 97.755 118.195 1.00 28.03 O
ATOM 24 OP2 C B2334 57.833 100.313 118.080 1.00 27.61 O
ATOM 25 O5' C B2334 60.080 99.266 118.222 1.00 30.16 O
TER
ATOM 2 P C A2334 58.584 99.075 117.720 1.00 31.86 P
ATOM 3 OP1 C A2334 58.103 97.755 118.195 1.00 28.03 O
ATOM 4 OP2 C A2334 57.833 100.313 118.080 1.00 27.61 O
ATOM 5 O5' C A2334 60.080 99.266 118.222 1.00 30.16 O
ATOM 6 C5' C A2334 61.120 98.386 117.786 1.00 28.32 C
ATOM 7 C4' C A2334 62.464 98.981 118.112 1.00 29.29 C
ATOM 8 O4' C A2334 62.686 100.155 117.274 1.00 29.74 O
ATOM 9 C3' C A2334 62.616 99.467 119.560 1.00 31.43 C
ATOM 10 O3' C A2334 63.937 99.200 120.000 1.00 32.51 O
ATOM 11 C2' C A2334 62.466 100.978 119.411 1.00 31.02 C
ATOM 12 O2' C A2334 63.054 101.773 120.423 1.00 30.62 O
ATOM 13 C1' C A2334 63.190 101.185 118.089 1.00 29.75 C
ATOM 14 N1 C A2334 62.988 102.504 117.466 1.00 30.22 N
ATOM 15 C2 C A2334 61.696 103.083 117.426 1.00 31.80 C
ATOM 16 O2 C A2334 60.700 102.398 117.753 1.00 31.24 O
ATOM 17 N3 C A2334 61.574 104.373 117.029 1.00 30.45 N
ATOM 18 C4 C A2334 62.656 105.062 116.659 1.00 28.24 C
ATOM 19 N4 C A2334 62.506 106.353 116.375 1.00 29.59 N
ATOM 20 C5 C A2334 63.946 104.464 116.589 1.00 28.88 C
ATOM 21 C6 C A2334 64.065 103.197 116.994 1.00 29.00 C
ATOM 22 P G A2335 64.284 97.788 120.672 1.00 33.86 P
ATOM 23 OP1 G A2335 63.273 96.799 120.234 1.00 33.12 O
ATOM 24 OP2 G A2335 64.490 98.039 122.127 1.00 34.37 O
ATOM 25 O5' G A2335 65.679 97.424 119.997 1.00 33.09 O
TER
ATOM 1 O3' G B2332 54.876 103.038 113.539 1.00 28.41 O
ATOM 2 P U B2333 55.424 103.007 115.052 1.00 29.80 P
ATOM 3 OP1 U B2333 54.353 102.332 115.838 1.00 29.43 O
ATOM 4 OP2 U B2333 55.891 104.353 115.464 1.00 27.67 O
ATOM 5 O5' U B2333 56.699 102.050 114.991 1.00 28.32 O
ATOM 6 C5' U B2333 56.608 100.731 114.425 1.00 28.40 C
ATOM 7 C4' U B2333 57.987 100.174 114.157 1.00 29.85 C
ATOM 8 O4' U B2333 58.666 100.996 113.170 1.00 29.97 O
ATOM 9 C3' U B2333 58.934 100.142 115.344 1.00 29.83 C
ATOM 10 O3' U B2333 58.713 98.968 116.120 1.00 29.45 O
ATOM 11 C2' U B2333 60.300 100.129 114.670 1.00 28.67 C
ATOM 12 O2' U B2333 60.651 98.844 114.192 1.00 32.62 O
ATOM 13 C1' U B2333 60.051 101.035 113.461 1.00 28.89 C
ATOM 14 N1 U B2333 60.455 102.443 113.614 1.00 28.73 N
ATOM 15 C2 U B2333 61.790 102.765 113.396 1.00 28.35 C
ATOM 16 O2 U B2333 62.654 101.930 113.170 1.00 26.69 O
ATOM 17 N3 U B2333 62.075 104.106 113.463 1.00 28.39 N
ATOM 18 C4 U B2333 61.195 105.131 113.741 1.00 28.18 C
ATOM 19 O4 U B2333 61.596 106.291 113.710 1.00 29.47 O
ATOM 20 C5 U B2333 59.853 104.715 114.001 1.00 27.62 C
ATOM 21 C6 U B2333 59.536 103.422 113.931 1.00 27.59 C
ATOM 22 P C B2334 58.584 99.075 117.720 1.00 31.86 P
ATOM 23 OP1 C B2334 58.103 97.755 118.195 1.00 28.03 O
ATOM 24 OP2 C B2334 57.833 100.313 118.080 1.00 27.61 O
ATOM 25 O5' C B2334 60.080 99.266 118.222 1.00 30.16 O
TER
Atoms:
C2: (61.696,103.083,117.426)
OP1: (58.103,97.755,118.195)
OP2: (57.833,100.313,118.080)
C4: (62.656,105.062,116.659)
O5': (60.080,99.266,118.222)
C3': (62.616,99.467,119.560)
C1': (63.190,101.185,118.089)
O4': (62.686,100.155,117.274)
C5': (61.120,98.386,117.786)
P: (58.584,99.075,117.720)
O2: (60.700,102.398,117.753)
C4': (62.464,98.981,118.112)
C2': (62.466,100.978,119.411)
O2': (63.054,101.773,120.423)
N1: (62.988,102.504,117.466)
N3: (61.574,104.373,117.029)
N4: (62.506,106.353,116.375)
C6: (64.065,103.197,116.994)
C5: (63.946,104.464,116.589)
O3': (63.937,99.200,120.000)
OP1: (58.103,97.755,118.195)
OP2: (57.833,100.313,118.080)
C4: (62.656,105.062,116.659)
O5': (60.080,99.266,118.222)
C3': (62.616,99.467,119.560)
C1': (63.190,101.185,118.089)
O4': (62.686,100.155,117.274)
C5': (61.120,98.386,117.786)
P: (58.584,99.075,117.720)
O2: (60.700,102.398,117.753)
C4': (62.464,98.981,118.112)
C2': (62.466,100.978,119.411)
O2': (63.054,101.773,120.423)
N1: (62.988,102.504,117.466)
N3: (61.574,104.373,117.029)
N4: (62.506,106.353,116.375)
C6: (64.065,103.197,116.994)
C5: (63.946,104.464,116.589)
O3': (63.937,99.200,120.000)
C4: (61.195,105.131,113.741)
N3: (62.075,104.106,113.463)
OP1: (54.353,102.332,115.838)
OP2: (55.891,104.353,115.464)
C2: (61.790,102.765,113.396)
C1': (60.051,101.035,113.461)
C3': (58.934,100.142,115.344)
O5': (56.699,102.050,114.991)
O4': (58.666,100.996,113.170)
C5': (56.608,100.731,114.425)
P: (55.424,103.007,115.052)
C4': (57.987,100.174,114.157)
C2': (60.300,100.129,114.670)
O2': (60.651,98.844,114.192)
N1: (60.455,102.443,113.614)
O4: (61.596,106.291,113.710)
O2: (62.654,101.930,113.170)
C6: (59.536,103.422,113.931)
C5: (59.853,104.715,114.001)
O3': (58.713,98.968,116.120)
N3: (62.075,104.106,113.463)
OP1: (54.353,102.332,115.838)
OP2: (55.891,104.353,115.464)
C2: (61.790,102.765,113.396)
C1': (60.051,101.035,113.461)
C3': (58.934,100.142,115.344)
O5': (56.699,102.050,114.991)
O4': (58.666,100.996,113.170)
C5': (56.608,100.731,114.425)
P: (55.424,103.007,115.052)
C4': (57.987,100.174,114.157)
C2': (60.300,100.129,114.670)
O2': (60.651,98.844,114.192)
N1: (60.455,102.443,113.614)
O4: (61.596,106.291,113.710)
O2: (62.654,101.930,113.170)
C6: (59.536,103.422,113.931)
C5: (59.853,104.715,114.001)
O3': (58.713,98.968,116.120)
Image (generated by PyMOL):