ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2913:2914

Extra

PDB:
ATOM 1 O3' A A 912 -58.165 -19.005 119.989 1.00 99.75 O
ATOM 2 P C A 913 -59.100 -17.785 119.491 1.00 89.44 P
ATOM 3 OP1 C A 913 -60.326 -18.380 118.902 1.00 89.92 O
ATOM 4 OP2 C A 913 -58.263 -16.906 118.647 1.00 87.77 O
ATOM 5 O5' C A 913 -59.469 -17.047 120.842 1.00 90.04 O
ATOM 6 C5' C A 913 -60.084 -17.757 121.893 1.00 91.71 C
ATOM 7 C4' C A 913 -60.074 -16.963 123.164 1.00 92.11 C
ATOM 8 O4' C A 913 -58.748 -16.970 123.729 1.00 92.13 O
ATOM 9 C3' C A 913 -60.420 -15.489 123.028 1.00 90.93 C
ATOM 10 O3' C A 913 -61.815 -15.271 122.991 1.00 91.26 O
ATOM 11 C2' C A 913 -59.735 -14.879 124.246 1.00 91.24 C
ATOM 12 O2' C A 913 -60.499 -15.109 125.421 1.00 92.74 O
ATOM 13 C1' C A 913 -58.473 -15.728 124.334 1.00 91.55 C
ATOM 14 N1 C A 913 -57.324 -15.115 123.635 1.00 90.08 N
ATOM 15 C2 C A 913 -56.463 -14.312 124.401 1.00 89.83 C
ATOM 16 O2 C A 913 -56.744 -14.147 125.616 1.00 90.86 O
ATOM 17 N3 C A 913 -55.376 -13.749 123.798 1.00 88.53 N
ATOM 18 C4 C A 913 -55.153 -13.973 122.503 1.00 87.54 C
ATOM 19 N4 C A 913 -54.082 -13.417 121.946 1.00 86.34 N
ATOM 20 C5 C A 913 -56.011 -14.793 121.705 1.00 87.78 C
ATOM 21 C6 C A 913 -57.075 -15.347 122.305 1.00 89.05 C
ATOM 22 P U A 914 -62.416 -13.921 122.399 1.00 92.46 P
ATOM 23 OP1 U A 914 -61.724 -12.798 123.071 1.00 91.89 O
ATOM 24 OP2 U A 914 -63.885 -14.017 122.514 1.00 93.24 O
ATOM 25 O5' U A 914 -61.982 -13.971 120.876 1.00 91.08 O
TER

ATOM 1 O3' C B 913 -61.815 -15.271 122.991 1.00 91.26 O
ATOM 2 P U B 914 -62.416 -13.921 122.399 1.00 92.46 P
ATOM 3 OP1 U B 914 -61.724 -12.798 123.071 1.00 91.89 O
ATOM 4 OP2 U B 914 -63.885 -14.017 122.514 1.00 93.24 O
ATOM 5 O5' U B 914 -61.982 -13.971 120.876 1.00 91.08 O
ATOM 6 C5' U B 914 -62.545 -13.057 119.942 1.00 89.87 C
ATOM 7 C4' U B 914 -61.576 -12.688 118.847 1.00 88.36 C
ATOM 8 O4' U B 914 -60.559 -11.787 119.373 1.00 87.70 O
ATOM 9 C3' U B 914 -60.825 -13.852 118.191 1.00 88.44 C
ATOM 10 O3' U B 914 -60.716 -13.600 116.787 1.00 87.17 O
ATOM 11 C2' U B 914 -59.436 -13.753 118.824 1.00 88.33 C
ATOM 12 O2' U B 914 -58.402 -14.307 118.038 1.00 87.79 O
ATOM 13 C1' U B 914 -59.297 -12.240 118.954 1.00 87.24 C
ATOM 14 N1 U B 914 -58.250 -11.749 119.910 1.00 87.25 N
ATOM 15 C2 U B 914 -57.045 -11.478 119.286 1.00 86.15 C
ATOM 16 O2 U B 914 -56.896 -11.684 118.097 1.00 85.35 O
ATOM 17 N3 U B 914 -56.018 -10.982 120.062 1.00 86.07 N
ATOM 18 C4 U B 914 -56.052 -10.699 121.415 1.00 86.95 C
ATOM 19 O4 U B 914 -55.011 -10.236 121.951 1.00 86.74 O
ATOM 20 C5 U B 914 -57.344 -11.000 122.009 1.00 88.08 C
ATOM 21 C6 U B 914 -58.372 -11.476 121.264 1.00 88.17 C
ATOM 22 P A B 915 -61.437 -14.567 115.719 1.00 93.94 P
ATOM 23 OP1 A B 915 -61.208 -15.948 116.175 1.00 95.25 O
ATOM 24 OP2 A B 915 -60.957 -14.177 114.369 1.00 92.51 O
ATOM 25 O5' A B 915 -62.969 -14.179 115.870 1.00 94.37 O
TER

Atoms:
C2: (-56.463,-14.312,124.401)
OP1: (-60.326,-18.380,118.902)
OP2: (-58.263,-16.906,118.647)
C4: (-55.153,-13.973,122.503)
O5': (-59.469,-17.047,120.842)
C3': (-60.420,-15.489,123.028)
C1': (-58.473,-15.728,124.334)
O4': (-58.748,-16.970,123.729)
C5': (-60.084,-17.757,121.893)
P: (-59.100,-17.785,119.491)
O2: (-56.744,-14.147,125.616)
C4': (-60.074,-16.963,123.164)
C2': (-59.735,-14.879,124.246)
O2': (-60.499,-15.109,125.421)
N1: (-57.324,-15.115,123.635)
N3: (-55.376,-13.749,123.798)
N4: (-54.082,-13.417,121.946)
C6: (-57.075,-15.347,122.305)
C5: (-56.011,-14.793,121.705)
O3': (-61.815,-15.271,122.991)
C4: (-56.052,-10.699,121.415)
N3: (-56.018,-10.982,120.062)
OP1: (-61.724,-12.798,123.071)
OP2: (-63.885,-14.017,122.514)
C2: (-57.045,-11.478,119.286)
C1': (-59.297,-12.240,118.954)
C3': (-60.825,-13.852,118.191)
O5': (-61.982,-13.971,120.876)
O4': (-60.559,-11.787,119.373)
C5': (-62.545,-13.057,119.942)
P: (-62.416,-13.921,122.399)
C4': (-61.576,-12.688,118.847)
C2': (-59.436,-13.753,118.824)
O2': (-58.402,-14.307,118.038)
N1: (-58.250,-11.749,119.910)
O4: (-55.011,-10.236,121.951)
O2: (-56.896,-11.684,118.097)
C6: (-58.372,-11.476,121.264)
C5: (-57.344,-11.000,122.009)
O3': (-60.716,-13.600,116.787)
Image (generated by PyMOL):
PyMOL image
show in jmol