Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02078:02079
Extra
PDB:
ATOM 1 O3' G A2077 107.051 105.471 33.435 1.00 56.13 O
ATOM 2 P C A2078 108.465 105.925 32.809 1.00 57.13 P
ATOM 3 OP1 C A2078 108.314 105.829 31.334 1.00 56.54 O
ATOM 4 OP2 C A2078 109.534 105.152 33.494 1.00 55.70 O
ATOM 5 O5' C A2078 108.596 107.467 33.199 1.00 56.29 O
ATOM 6 C5' C A2078 107.693 108.440 32.627 1.00 56.44 C
ATOM 7 C4' C A2078 107.882 109.797 33.264 1.00 55.32 C
ATOM 8 O4' C A2078 107.608 109.726 34.684 1.00 55.08 O
ATOM 9 C3' C A2078 109.273 110.396 33.190 1.00 55.62 C
ATOM 10 O3' C A2078 109.463 110.994 31.918 1.00 57.81 O
ATOM 11 C2' C A2078 109.238 111.421 34.318 1.00 54.48 C
ATOM 12 O2' C A2078 108.552 112.603 33.963 1.00 53.61 O
ATOM 13 C1' C A2078 108.403 110.681 35.366 1.00 53.95 C
ATOM 14 N1 C A2078 109.178 109.989 36.413 1.00 53.91 N
ATOM 15 C2 C A2078 109.520 110.697 37.582 1.00 54.65 C
ATOM 16 O2 C A2078 109.194 111.900 37.685 1.00 56.14 O
ATOM 17 N3 C A2078 110.194 110.057 38.566 1.00 54.20 N
ATOM 18 C4 C A2078 110.534 108.775 38.418 1.00 53.57 C
ATOM 19 N4 C A2078 111.188 108.186 39.423 1.00 54.24 N
ATOM 20 C5 C A2078 110.218 108.039 37.236 1.00 52.27 C
ATOM 21 C6 C A2078 109.547 108.677 36.270 1.00 52.32 C
ATOM 22 P U A2079 110.938 111.113 31.291 1.00 59.34 P
ATOM 23 OP1 U A2079 111.630 112.245 31.958 1.00 59.10 O
ATOM 24 OP2 U A2079 110.802 111.098 29.806 1.00 57.80 O
ATOM 25 O5' U A2079 111.687 109.782 31.718 1.00 58.19 O
TER
ATOM 1 O3' C B2078 109.463 110.994 31.918 1.00 57.81 O
ATOM 2 P U B2079 110.938 111.113 31.291 1.00 59.34 P
ATOM 3 OP1 U B2079 111.630 112.245 31.958 1.00 59.10 O
ATOM 4 OP2 U B2079 110.802 111.098 29.806 1.00 57.80 O
ATOM 5 O5' U B2079 111.687 109.782 31.718 1.00 58.19 O
ATOM 6 C5' U B2079 112.924 109.427 31.091 1.00 60.46 C
ATOM 7 C4' U B2079 113.508 108.222 31.760 1.00 61.65 C
ATOM 8 O4' U B2079 114.060 108.596 33.048 1.00 61.09 O
ATOM 9 C3' U B2079 112.499 107.118 32.032 1.00 63.24 C
ATOM 10 O3' U B2079 113.168 105.869 31.953 1.00 67.40 O
ATOM 11 C2' U B2079 112.092 107.412 33.473 1.00 62.60 C
ATOM 12 O2' U B2079 111.605 106.284 34.163 1.00 64.35 O
ATOM 13 C1' U B2079 113.429 107.848 34.059 1.00 60.87 C
ATOM 14 N1 U B2079 113.371 108.660 35.281 1.00 59.74 N
ATOM 15 C2 U B2079 113.782 108.057 36.453 1.00 60.30 C
ATOM 16 O2 U B2079 114.119 106.882 36.513 1.00 61.66 O
ATOM 17 N3 U B2079 113.782 108.871 37.556 1.00 60.16 N
ATOM 18 C4 U B2079 113.408 110.192 37.612 1.00 60.24 C
ATOM 19 O4 U B2079 113.533 110.807 38.675 1.00 61.50 O
ATOM 20 C5 U B2079 112.955 110.738 36.365 1.00 59.04 C
ATOM 21 C6 U B2079 112.952 109.972 35.270 1.00 58.86 C
ATOM 22 P G B2080 113.575 105.271 30.519 1.00 69.51 P
ATOM 23 OP1 G B2080 112.592 105.786 29.524 1.00 68.04 O
ATOM 24 OP2 G B2080 113.756 103.800 30.680 1.00 69.61 O
ATOM 25 O5' G B2080 115.006 105.930 30.238 1.00 72.37 O
TER
ATOM 2 P C A2078 108.465 105.925 32.809 1.00 57.13 P
ATOM 3 OP1 C A2078 108.314 105.829 31.334 1.00 56.54 O
ATOM 4 OP2 C A2078 109.534 105.152 33.494 1.00 55.70 O
ATOM 5 O5' C A2078 108.596 107.467 33.199 1.00 56.29 O
ATOM 6 C5' C A2078 107.693 108.440 32.627 1.00 56.44 C
ATOM 7 C4' C A2078 107.882 109.797 33.264 1.00 55.32 C
ATOM 8 O4' C A2078 107.608 109.726 34.684 1.00 55.08 O
ATOM 9 C3' C A2078 109.273 110.396 33.190 1.00 55.62 C
ATOM 10 O3' C A2078 109.463 110.994 31.918 1.00 57.81 O
ATOM 11 C2' C A2078 109.238 111.421 34.318 1.00 54.48 C
ATOM 12 O2' C A2078 108.552 112.603 33.963 1.00 53.61 O
ATOM 13 C1' C A2078 108.403 110.681 35.366 1.00 53.95 C
ATOM 14 N1 C A2078 109.178 109.989 36.413 1.00 53.91 N
ATOM 15 C2 C A2078 109.520 110.697 37.582 1.00 54.65 C
ATOM 16 O2 C A2078 109.194 111.900 37.685 1.00 56.14 O
ATOM 17 N3 C A2078 110.194 110.057 38.566 1.00 54.20 N
ATOM 18 C4 C A2078 110.534 108.775 38.418 1.00 53.57 C
ATOM 19 N4 C A2078 111.188 108.186 39.423 1.00 54.24 N
ATOM 20 C5 C A2078 110.218 108.039 37.236 1.00 52.27 C
ATOM 21 C6 C A2078 109.547 108.677 36.270 1.00 52.32 C
ATOM 22 P U A2079 110.938 111.113 31.291 1.00 59.34 P
ATOM 23 OP1 U A2079 111.630 112.245 31.958 1.00 59.10 O
ATOM 24 OP2 U A2079 110.802 111.098 29.806 1.00 57.80 O
ATOM 25 O5' U A2079 111.687 109.782 31.718 1.00 58.19 O
TER
ATOM 1 O3' C B2078 109.463 110.994 31.918 1.00 57.81 O
ATOM 2 P U B2079 110.938 111.113 31.291 1.00 59.34 P
ATOM 3 OP1 U B2079 111.630 112.245 31.958 1.00 59.10 O
ATOM 4 OP2 U B2079 110.802 111.098 29.806 1.00 57.80 O
ATOM 5 O5' U B2079 111.687 109.782 31.718 1.00 58.19 O
ATOM 6 C5' U B2079 112.924 109.427 31.091 1.00 60.46 C
ATOM 7 C4' U B2079 113.508 108.222 31.760 1.00 61.65 C
ATOM 8 O4' U B2079 114.060 108.596 33.048 1.00 61.09 O
ATOM 9 C3' U B2079 112.499 107.118 32.032 1.00 63.24 C
ATOM 10 O3' U B2079 113.168 105.869 31.953 1.00 67.40 O
ATOM 11 C2' U B2079 112.092 107.412 33.473 1.00 62.60 C
ATOM 12 O2' U B2079 111.605 106.284 34.163 1.00 64.35 O
ATOM 13 C1' U B2079 113.429 107.848 34.059 1.00 60.87 C
ATOM 14 N1 U B2079 113.371 108.660 35.281 1.00 59.74 N
ATOM 15 C2 U B2079 113.782 108.057 36.453 1.00 60.30 C
ATOM 16 O2 U B2079 114.119 106.882 36.513 1.00 61.66 O
ATOM 17 N3 U B2079 113.782 108.871 37.556 1.00 60.16 N
ATOM 18 C4 U B2079 113.408 110.192 37.612 1.00 60.24 C
ATOM 19 O4 U B2079 113.533 110.807 38.675 1.00 61.50 O
ATOM 20 C5 U B2079 112.955 110.738 36.365 1.00 59.04 C
ATOM 21 C6 U B2079 112.952 109.972 35.270 1.00 58.86 C
ATOM 22 P G B2080 113.575 105.271 30.519 1.00 69.51 P
ATOM 23 OP1 G B2080 112.592 105.786 29.524 1.00 68.04 O
ATOM 24 OP2 G B2080 113.756 103.800 30.680 1.00 69.61 O
ATOM 25 O5' G B2080 115.006 105.930 30.238 1.00 72.37 O
TER
Atoms:
C2: (109.520,110.697,37.582)
OP1: (108.314,105.829,31.334)
OP2: (109.534,105.152,33.494)
C4: (110.534,108.775,38.418)
O5': (108.596,107.467,33.199)
C3': (109.273,110.396,33.190)
C1': (108.403,110.681,35.366)
O4': (107.608,109.726,34.684)
C5': (107.693,108.440,32.627)
P: (108.465,105.925,32.809)
O2: (109.194,111.900,37.685)
C4': (107.882,109.797,33.264)
C2': (109.238,111.421,34.318)
O2': (108.552,112.603,33.963)
N1: (109.178,109.989,36.413)
N3: (110.194,110.057,38.566)
N4: (111.188,108.186,39.423)
C6: (109.547,108.677,36.270)
C5: (110.218,108.039,37.236)
O3': (109.463,110.994,31.918)
OP1: (108.314,105.829,31.334)
OP2: (109.534,105.152,33.494)
C4: (110.534,108.775,38.418)
O5': (108.596,107.467,33.199)
C3': (109.273,110.396,33.190)
C1': (108.403,110.681,35.366)
O4': (107.608,109.726,34.684)
C5': (107.693,108.440,32.627)
P: (108.465,105.925,32.809)
O2: (109.194,111.900,37.685)
C4': (107.882,109.797,33.264)
C2': (109.238,111.421,34.318)
O2': (108.552,112.603,33.963)
N1: (109.178,109.989,36.413)
N3: (110.194,110.057,38.566)
N4: (111.188,108.186,39.423)
C6: (109.547,108.677,36.270)
C5: (110.218,108.039,37.236)
O3': (109.463,110.994,31.918)
C4: (113.408,110.192,37.612)
N3: (113.782,108.871,37.556)
OP1: (111.630,112.245,31.958)
OP2: (110.802,111.098,29.806)
C2: (113.782,108.057,36.453)
C1': (113.429,107.848,34.059)
C3': (112.499,107.118,32.032)
O5': (111.687,109.782,31.718)
O4': (114.060,108.596,33.048)
C5': (112.924,109.427,31.091)
P: (110.938,111.113,31.291)
C4': (113.508,108.222,31.760)
C2': (112.092,107.412,33.473)
O2': (111.605,106.284,34.163)
N1: (113.371,108.660,35.281)
O4: (113.533,110.807,38.675)
O2: (114.119,106.882,36.513)
C6: (112.952,109.972,35.270)
C5: (112.955,110.738,36.365)
O3': (113.168,105.869,31.953)
N3: (113.782,108.871,37.556)
OP1: (111.630,112.245,31.958)
OP2: (110.802,111.098,29.806)
C2: (113.782,108.057,36.453)
C1': (113.429,107.848,34.059)
C3': (112.499,107.118,32.032)
O5': (111.687,109.782,31.718)
O4': (114.060,108.596,33.048)
C5': (112.924,109.427,31.091)
P: (110.938,111.113,31.291)
C4': (113.508,108.222,31.760)
C2': (112.092,107.412,33.473)
O2': (111.605,106.284,34.163)
N1: (113.371,108.660,35.281)
O4: (113.533,110.807,38.675)
O2: (114.119,106.882,36.513)
C6: (112.952,109.972,35.270)
C5: (112.955,110.738,36.365)
O3': (113.168,105.869,31.953)
Image (generated by PyMOL):