Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A505:A506
Extra
PDB:
ATOM 1 O3' G A 504 -98.341 35.256 -46.189 1.00 25.18 O
ATOM 2 P C A 505 -97.492 35.550 -47.514 1.00 25.08 P
ATOM 3 OP1 C A 505 -97.322 37.019 -47.606 1.00 25.08 O
ATOM 4 OP2 C A 505 -98.159 34.835 -48.616 1.00 25.08 O
ATOM 5 O5' C A 505 -96.092 34.886 -47.206 1.00 25.08 O
ATOM 6 C5' C A 505 -95.088 35.620 -46.540 1.00 25.08 C
ATOM 7 C4' C A 505 -93.977 34.725 -46.088 1.00 25.08 C
ATOM 8 O4' C A 505 -94.528 33.559 -45.415 1.00 25.08 O
ATOM 9 C3' C A 505 -93.114 34.133 -47.185 1.00 25.08 C
ATOM 10 O3' C A 505 -92.160 35.049 -47.697 1.00 25.08 O
ATOM 11 C2' C A 505 -92.505 32.917 -46.488 1.00 25.08 C
ATOM 12 O2' C A 505 -91.442 33.291 -45.612 1.00 25.08 O
ATOM 13 C1' C A 505 -93.693 32.439 -45.647 1.00 25.08 C
ATOM 14 N1 C A 505 -94.478 31.406 -46.349 1.00 25.47 N
ATOM 15 C2 C A 505 -94.150 30.058 -46.169 1.00 25.47 C
ATOM 16 O2 C A 505 -93.216 29.746 -45.407 1.00 25.47 O
ATOM 17 N3 C A 505 -94.858 29.118 -46.823 1.00 25.47 N
ATOM 18 C4 C A 505 -95.852 29.487 -47.623 1.00 25.47 C
ATOM 19 N4 C A 505 -96.531 28.524 -48.251 1.00 25.47 N
ATOM 20 C5 C A 505 -96.197 30.845 -47.832 1.00 25.47 C
ATOM 21 C6 C A 505 -95.490 31.763 -47.179 1.00 25.47 C
ATOM 22 P U A 506 -91.974 35.230 -49.291 1.00 29.79 P
ATOM 23 OP1 U A 506 -91.059 34.164 -49.749 1.00 29.79 O
ATOM 24 OP2 U A 506 -91.591 36.646 -49.534 1.00 29.79 O
ATOM 25 O5' U A 506 -93.442 34.961 -49.853 1.00 29.79 O
TER
ATOM 1 O3' C B 505 -92.160 35.049 -47.697 1.00 25.08 O
ATOM 2 P U B 506 -91.974 35.230 -49.291 1.00 29.79 P
ATOM 3 OP1 U B 506 -91.059 34.164 -49.749 1.00 29.79 O
ATOM 4 OP2 U B 506 -91.591 36.646 -49.534 1.00 29.79 O
ATOM 5 O5' U B 506 -93.442 34.961 -49.853 1.00 29.79 O
ATOM 6 C5' U B 506 -93.946 35.713 -50.948 1.00 29.79 C
ATOM 7 C4' U B 506 -95.046 34.985 -51.665 1.00 29.79 C
ATOM 8 O4' U B 506 -94.607 33.637 -51.954 1.00 29.79 O
ATOM 9 C3' U B 506 -96.361 34.859 -50.893 1.00 29.79 C
ATOM 10 O3' U B 506 -97.455 35.072 -51.778 1.00 29.79 O
ATOM 11 C2' U B 506 -96.363 33.411 -50.417 1.00 29.79 C
ATOM 12 O2' U B 506 -97.647 32.843 -50.259 1.00 29.79 O
ATOM 13 C1' U B 506 -95.593 32.719 -51.531 1.00 29.79 C
ATOM 14 N1 U B 506 -94.936 31.458 -51.106 1.00 29.85 N
ATOM 15 C2 U B 506 -95.493 30.289 -51.574 1.00 29.85 C
ATOM 16 O2 U B 506 -96.448 30.298 -52.319 1.00 29.85 O
ATOM 17 N3 U B 506 -94.891 29.128 -51.155 1.00 29.85 N
ATOM 18 C4 U B 506 -93.807 29.026 -50.306 1.00 29.85 C
ATOM 19 O4 U B 506 -93.360 27.917 -49.999 1.00 29.85 O
ATOM 20 C5 U B 506 -93.291 30.281 -49.847 1.00 29.85 C
ATOM 21 C6 U B 506 -93.866 31.425 -50.248 1.00 29.85 C
ATOM 22 P A B 507 -97.646 36.500 -52.476 1.00 23.12 P
ATOM 23 OP1 A B 507 -96.432 37.298 -52.166 1.00 23.12 O
ATOM 24 OP2 A B 507 -98.969 37.025 -52.063 1.00 23.12 O
ATOM 25 O5' A B 507 -97.666 36.137 -54.013 1.00 23.12 O
TER
ATOM 2 P C A 505 -97.492 35.550 -47.514 1.00 25.08 P
ATOM 3 OP1 C A 505 -97.322 37.019 -47.606 1.00 25.08 O
ATOM 4 OP2 C A 505 -98.159 34.835 -48.616 1.00 25.08 O
ATOM 5 O5' C A 505 -96.092 34.886 -47.206 1.00 25.08 O
ATOM 6 C5' C A 505 -95.088 35.620 -46.540 1.00 25.08 C
ATOM 7 C4' C A 505 -93.977 34.725 -46.088 1.00 25.08 C
ATOM 8 O4' C A 505 -94.528 33.559 -45.415 1.00 25.08 O
ATOM 9 C3' C A 505 -93.114 34.133 -47.185 1.00 25.08 C
ATOM 10 O3' C A 505 -92.160 35.049 -47.697 1.00 25.08 O
ATOM 11 C2' C A 505 -92.505 32.917 -46.488 1.00 25.08 C
ATOM 12 O2' C A 505 -91.442 33.291 -45.612 1.00 25.08 O
ATOM 13 C1' C A 505 -93.693 32.439 -45.647 1.00 25.08 C
ATOM 14 N1 C A 505 -94.478 31.406 -46.349 1.00 25.47 N
ATOM 15 C2 C A 505 -94.150 30.058 -46.169 1.00 25.47 C
ATOM 16 O2 C A 505 -93.216 29.746 -45.407 1.00 25.47 O
ATOM 17 N3 C A 505 -94.858 29.118 -46.823 1.00 25.47 N
ATOM 18 C4 C A 505 -95.852 29.487 -47.623 1.00 25.47 C
ATOM 19 N4 C A 505 -96.531 28.524 -48.251 1.00 25.47 N
ATOM 20 C5 C A 505 -96.197 30.845 -47.832 1.00 25.47 C
ATOM 21 C6 C A 505 -95.490 31.763 -47.179 1.00 25.47 C
ATOM 22 P U A 506 -91.974 35.230 -49.291 1.00 29.79 P
ATOM 23 OP1 U A 506 -91.059 34.164 -49.749 1.00 29.79 O
ATOM 24 OP2 U A 506 -91.591 36.646 -49.534 1.00 29.79 O
ATOM 25 O5' U A 506 -93.442 34.961 -49.853 1.00 29.79 O
TER
ATOM 1 O3' C B 505 -92.160 35.049 -47.697 1.00 25.08 O
ATOM 2 P U B 506 -91.974 35.230 -49.291 1.00 29.79 P
ATOM 3 OP1 U B 506 -91.059 34.164 -49.749 1.00 29.79 O
ATOM 4 OP2 U B 506 -91.591 36.646 -49.534 1.00 29.79 O
ATOM 5 O5' U B 506 -93.442 34.961 -49.853 1.00 29.79 O
ATOM 6 C5' U B 506 -93.946 35.713 -50.948 1.00 29.79 C
ATOM 7 C4' U B 506 -95.046 34.985 -51.665 1.00 29.79 C
ATOM 8 O4' U B 506 -94.607 33.637 -51.954 1.00 29.79 O
ATOM 9 C3' U B 506 -96.361 34.859 -50.893 1.00 29.79 C
ATOM 10 O3' U B 506 -97.455 35.072 -51.778 1.00 29.79 O
ATOM 11 C2' U B 506 -96.363 33.411 -50.417 1.00 29.79 C
ATOM 12 O2' U B 506 -97.647 32.843 -50.259 1.00 29.79 O
ATOM 13 C1' U B 506 -95.593 32.719 -51.531 1.00 29.79 C
ATOM 14 N1 U B 506 -94.936 31.458 -51.106 1.00 29.85 N
ATOM 15 C2 U B 506 -95.493 30.289 -51.574 1.00 29.85 C
ATOM 16 O2 U B 506 -96.448 30.298 -52.319 1.00 29.85 O
ATOM 17 N3 U B 506 -94.891 29.128 -51.155 1.00 29.85 N
ATOM 18 C4 U B 506 -93.807 29.026 -50.306 1.00 29.85 C
ATOM 19 O4 U B 506 -93.360 27.917 -49.999 1.00 29.85 O
ATOM 20 C5 U B 506 -93.291 30.281 -49.847 1.00 29.85 C
ATOM 21 C6 U B 506 -93.866 31.425 -50.248 1.00 29.85 C
ATOM 22 P A B 507 -97.646 36.500 -52.476 1.00 23.12 P
ATOM 23 OP1 A B 507 -96.432 37.298 -52.166 1.00 23.12 O
ATOM 24 OP2 A B 507 -98.969 37.025 -52.063 1.00 23.12 O
ATOM 25 O5' A B 507 -97.666 36.137 -54.013 1.00 23.12 O
TER
Atoms:
C2: (-94.150,30.058,-46.169)
OP1: (-97.322,37.019,-47.606)
OP2: (-98.159,34.835,-48.616)
C4: (-95.852,29.487,-47.623)
O5': (-96.092,34.886,-47.206)
C3': (-93.114,34.133,-47.185)
C1': (-93.693,32.439,-45.647)
O4': (-94.528,33.559,-45.415)
C5': (-95.088,35.620,-46.540)
P: (-97.492,35.550,-47.514)
O2: (-93.216,29.746,-45.407)
C4': (-93.977,34.725,-46.088)
C2': (-92.505,32.917,-46.488)
O2': (-91.442,33.291,-45.612)
N1: (-94.478,31.406,-46.349)
N3: (-94.858,29.118,-46.823)
N4: (-96.531,28.524,-48.251)
C6: (-95.490,31.763,-47.179)
C5: (-96.197,30.845,-47.832)
O3': (-92.160,35.049,-47.697)
OP1: (-97.322,37.019,-47.606)
OP2: (-98.159,34.835,-48.616)
C4: (-95.852,29.487,-47.623)
O5': (-96.092,34.886,-47.206)
C3': (-93.114,34.133,-47.185)
C1': (-93.693,32.439,-45.647)
O4': (-94.528,33.559,-45.415)
C5': (-95.088,35.620,-46.540)
P: (-97.492,35.550,-47.514)
O2: (-93.216,29.746,-45.407)
C4': (-93.977,34.725,-46.088)
C2': (-92.505,32.917,-46.488)
O2': (-91.442,33.291,-45.612)
N1: (-94.478,31.406,-46.349)
N3: (-94.858,29.118,-46.823)
N4: (-96.531,28.524,-48.251)
C6: (-95.490,31.763,-47.179)
C5: (-96.197,30.845,-47.832)
O3': (-92.160,35.049,-47.697)
C4: (-93.807,29.026,-50.306)
N3: (-94.891,29.128,-51.155)
OP1: (-91.059,34.164,-49.749)
OP2: (-91.591,36.646,-49.534)
C2: (-95.493,30.289,-51.574)
C1': (-95.593,32.719,-51.531)
C3': (-96.361,34.859,-50.893)
O5': (-93.442,34.961,-49.853)
O4': (-94.607,33.637,-51.954)
C5': (-93.946,35.713,-50.948)
P: (-91.974,35.230,-49.291)
C4': (-95.046,34.985,-51.665)
C2': (-96.363,33.411,-50.417)
O2': (-97.647,32.843,-50.259)
N1: (-94.936,31.458,-51.106)
O4: (-93.360,27.917,-49.999)
O2: (-96.448,30.298,-52.319)
C6: (-93.866,31.425,-50.248)
C5: (-93.291,30.281,-49.847)
O3': (-97.455,35.072,-51.778)
N3: (-94.891,29.128,-51.155)
OP1: (-91.059,34.164,-49.749)
OP2: (-91.591,36.646,-49.534)
C2: (-95.493,30.289,-51.574)
C1': (-95.593,32.719,-51.531)
C3': (-96.361,34.859,-50.893)
O5': (-93.442,34.961,-49.853)
O4': (-94.607,33.637,-51.954)
C5': (-93.946,35.713,-50.948)
P: (-91.974,35.230,-49.291)
C4': (-95.046,34.985,-51.665)
C2': (-96.363,33.411,-50.417)
O2': (-97.647,32.843,-50.259)
N1: (-94.936,31.458,-51.106)
O4: (-93.360,27.917,-49.999)
O2: (-96.448,30.298,-52.319)
C6: (-93.866,31.425,-50.248)
C5: (-93.291,30.281,-49.847)
O3': (-97.455,35.072,-51.778)
Image (generated by PyMOL):