ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A1857:A1858

Extra

PDB:
ATOM 1 O3' C A1856 92.384 -31.335 3.127 1.00 61.13 O
ATOM 2 P C A1857 92.269 -31.650 4.695 1.00 63.74 P
ATOM 3 OP1 C A1857 92.601 -33.087 4.893 1.00 60.00 O
ATOM 4 OP2 C A1857 90.950 -31.140 5.154 1.00 65.92 O
ATOM 5 O5' C A1857 93.437 -30.785 5.344 1.00 61.40 O
ATOM 6 C5' C A1857 94.778 -31.262 5.325 1.00 66.68 C
ATOM 7 C4' C A1857 95.725 -30.240 5.907 1.00 69.69 C
ATOM 8 O4' C A1857 95.676 -29.036 5.108 1.00 64.58 O
ATOM 9 C3' C A1857 95.439 -29.765 7.326 1.00 62.72 C
ATOM 10 O3' C A1857 96.013 -30.633 8.291 1.00 71.82 O
ATOM 11 C2' C A1857 96.088 -28.386 7.379 1.00 65.00 C
ATOM 12 O2' C A1857 97.436 -28.390 7.795 1.00 76.13 O
ATOM 13 C1' C A1857 95.987 -27.923 5.925 1.00 67.63 C
ATOM 14 N1 C A1857 94.992 -26.862 5.707 1.00 65.44 N
ATOM 15 C2 C A1857 95.446 -25.556 5.564 1.00 62.35 C
ATOM 16 O2 C A1857 96.666 -25.341 5.613 1.00 69.22 O
ATOM 17 N3 C A1857 94.551 -24.559 5.378 1.00 60.35 N
ATOM 18 C4 C A1857 93.251 -24.835 5.329 1.00 58.45 C
ATOM 19 N4 C A1857 92.412 -23.829 5.122 1.00 57.50 N
ATOM 20 C5 C A1857 92.756 -26.157 5.480 1.00 58.22 C
ATOM 21 C6 C A1857 93.652 -27.135 5.658 1.00 61.46 C
ATOM 22 P U A1858 95.492 -30.587 9.800 1.00 69.71 P
ATOM 23 OP1 U A1858 95.604 -29.170 10.231 1.00 43.78 O
ATOM 24 OP2 U A1858 96.187 -31.658 10.583 1.00 70.56 O
ATOM 25 O5' U A1858 93.949 -30.948 9.659 1.00 63.35 O
TER

ATOM 1 O3' C B1857 96.013 -30.633 8.291 1.00 71.82 O
ATOM 2 P U B1858 95.492 -30.587 9.800 1.00 69.71 P
ATOM 3 OP1 U B1858 95.604 -29.170 10.231 1.00 43.78 O
ATOM 4 OP2 U B1858 96.187 -31.658 10.583 1.00 70.56 O
ATOM 5 O5' U B1858 93.949 -30.948 9.659 1.00 63.35 O
ATOM 6 C5' U B1858 93.073 -30.831 10.765 1.00 54.43 C
ATOM 7 C4' U B1858 91.755 -30.237 10.333 1.00 52.85 C
ATOM 8 O4' U B1858 91.696 -28.800 10.502 1.00 53.13 O
ATOM 9 C3' U B1858 91.250 -30.554 8.929 1.00 55.28 C
ATOM 10 O3' U B1858 89.885 -30.933 9.042 1.00 64.11 O
ATOM 11 C2' U B1858 91.370 -29.202 8.216 1.00 55.23 C
ATOM 12 O2' U B1858 90.454 -28.975 7.156 1.00 60.61 O
ATOM 13 C1' U B1858 91.108 -28.221 9.358 1.00 55.20 C
ATOM 14 N1 U B1858 91.735 -26.920 9.105 1.00 57.08 N
ATOM 15 C2 U B1858 90.942 -25.887 8.662 1.00 58.36 C
ATOM 16 O2 U B1858 89.735 -25.982 8.510 1.00 64.14 O
ATOM 17 N3 U B1858 91.618 -24.728 8.398 1.00 53.51 N
ATOM 18 C4 U B1858 92.966 -24.506 8.536 1.00 52.35 C
ATOM 19 O4 U B1858 93.445 -23.438 8.177 1.00 59.39 O
ATOM 20 C5 U B1858 93.699 -25.608 9.019 1.00 54.20 C
ATOM 21 C6 U B1858 93.077 -26.749 9.284 1.00 59.47 C
ATOM 22 P U B1859 89.518 -32.350 9.706 1.00 60.17 P
ATOM 23 OP1 U B1859 90.801 -32.997 10.083 1.00 57.50 O
ATOM 24 OP2 U B1859 88.622 -33.000 8.725 1.00 47.27 O
ATOM 25 O5' U B1859 88.739 -31.974 11.058 1.00 48.17 O
TER

Atoms:
C2: (95.446,-25.556,5.564)
OP1: (92.601,-33.087,4.893)
OP2: (90.950,-31.140,5.154)
C4: (93.251,-24.835,5.329)
O5': (93.437,-30.785,5.344)
C3': (95.439,-29.765,7.326)
C1': (95.987,-27.923,5.925)
O4': (95.676,-29.036,5.108)
C5': (94.778,-31.262,5.325)
P: (92.269,-31.650,4.695)
O2: (96.666,-25.341,5.613)
C4': (95.725,-30.240,5.907)
C2': (96.088,-28.386,7.379)
O2': (97.436,-28.390,7.795)
N1: (94.992,-26.862,5.707)
N3: (94.551,-24.559,5.378)
N4: (92.412,-23.829,5.122)
C6: (93.652,-27.135,5.658)
C5: (92.756,-26.157,5.480)
O3': (96.013,-30.633,8.291)
C4: (92.966,-24.506,8.536)
N3: (91.618,-24.728,8.398)
OP1: (95.604,-29.170,10.231)
OP2: (96.187,-31.658,10.583)
C2: (90.942,-25.887,8.662)
C1': (91.108,-28.221,9.358)
C3': (91.250,-30.554,8.929)
O5': (93.949,-30.948,9.659)
O4': (91.696,-28.800,10.502)
C5': (93.073,-30.831,10.765)
P: (95.492,-30.587,9.800)
C4': (91.755,-30.237,10.333)
C2': (91.370,-29.202,8.216)
O2': (90.454,-28.975,7.156)
N1: (91.735,-26.920,9.105)
O4: (93.445,-23.438,8.177)
O2: (89.735,-25.982,8.510)
C6: (93.077,-26.749,9.284)
C5: (93.699,-25.608,9.019)
O3': (89.885,-30.933,9.042)
Image (generated by PyMOL):
PyMOL image
show in jmol