Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01852:01897
Extra
PDB:
ATOM 1 O3' C A1851 119.400 103.378 88.445 1.00 51.54 O
ATOM 2 P C A1852 119.993 103.389 86.950 1.00 54.32 P
ATOM 3 OP1 C A1852 120.383 101.992 86.619 1.00 53.28 O
ATOM 4 OP2 C A1852 121.000 104.479 86.832 1.00 52.76 O
ATOM 5 O5' C A1852 118.741 103.766 86.041 1.00 54.36 O
ATOM 6 C5' C A1852 117.578 102.925 86.014 1.00 53.27 C
ATOM 7 C4' C A1852 117.144 102.681 84.592 1.00 52.42 C
ATOM 8 O4' C A1852 116.606 103.905 84.023 1.00 52.60 O
ATOM 9 C3' C A1852 118.232 102.214 83.631 1.00 52.42 C
ATOM 10 O3' C A1852 117.631 101.369 82.667 1.00 55.07 O
ATOM 11 C2' C A1852 118.634 103.508 82.932 1.00 52.30 C
ATOM 12 O2' C A1852 119.200 103.288 81.652 1.00 49.60 O
ATOM 13 C1' C A1852 117.272 104.190 82.812 1.00 51.66 C
ATOM 14 N1 C A1852 117.252 105.648 82.598 1.00 50.46 N
ATOM 15 C2 C A1852 116.188 106.197 81.875 1.00 48.81 C
ATOM 16 O2 C A1852 115.313 105.439 81.420 1.00 46.97 O
ATOM 17 N3 C A1852 116.139 107.537 81.688 1.00 48.52 N
ATOM 18 C4 C A1852 117.098 108.317 82.190 1.00 47.90 C
ATOM 19 N4 C A1852 116.998 109.630 81.999 1.00 47.47 N
ATOM 20 C5 C A1852 118.199 107.785 82.916 1.00 48.94 C
ATOM 21 C6 C A1852 118.237 106.457 83.097 1.00 50.41 C
ATOM 22 P A A1853 117.846 99.787 82.753 1.00 55.68 P
ATOM 23 OP1 A A1853 118.965 99.515 83.700 1.00 53.05 O
ATOM 24 OP2 A A1853 117.920 99.294 81.348 1.00 53.15 O
ATOM 25 O5' A A1853 116.494 99.245 83.394 1.00 53.91 O
TER
ATOM 1 O3' G B1896 124.164 107.908 78.699 1.00 47.36 O
ATOM 2 P U B1897 123.665 108.172 80.201 1.00 49.69 P
ATOM 3 OP1 U B1897 124.674 109.011 80.902 1.00 49.31 O
ATOM 4 OP2 U B1897 123.260 106.869 80.787 1.00 49.16 O
ATOM 5 O5' U B1897 122.355 109.049 79.998 1.00 50.91 O
ATOM 6 C5' U B1897 122.438 110.338 79.363 1.00 49.21 C
ATOM 7 C4' U B1897 121.059 110.871 79.072 1.00 46.65 C
ATOM 8 O4' U B1897 120.382 109.995 78.138 1.00 46.56 O
ATOM 9 C3' U B1897 120.103 110.946 80.247 1.00 44.13 C
ATOM 10 O3' U B1897 120.340 112.105 81.022 1.00 41.73 O
ATOM 11 C2' U B1897 118.761 111.010 79.540 1.00 44.23 C
ATOM 12 O2' U B1897 118.547 112.285 78.976 1.00 45.24 O
ATOM 13 C1' U B1897 118.987 110.025 78.394 1.00 45.80 C
ATOM 14 N1 U B1897 118.523 108.654 78.665 1.00 47.38 N
ATOM 15 C2 U B1897 117.210 108.352 78.360 1.00 46.50 C
ATOM 16 O2 U B1897 116.430 109.166 77.916 1.00 47.98 O
ATOM 17 N3 U B1897 116.842 107.055 78.596 1.00 48.33 N
ATOM 18 C4 U B1897 117.628 106.046 79.097 1.00 48.36 C
ATOM 19 O4 U B1897 117.152 104.919 79.217 1.00 49.20 O
ATOM 20 C5 U B1897 118.970 106.433 79.409 1.00 48.27 C
ATOM 21 C6 U B1897 119.363 107.692 79.190 1.00 48.05 C
ATOM 22 P C B1898 119.988 112.097 82.582 1.00 42.87 P
ATOM 23 OP1 C B1898 120.481 113.367 83.179 1.00 44.35 O
ATOM 24 OP2 C B1898 120.421 110.797 83.154 1.00 42.65 O
ATOM 25 O5' C B1898 118.399 112.135 82.611 1.00 44.86 O
TER
ATOM 2 P C A1852 119.993 103.389 86.950 1.00 54.32 P
ATOM 3 OP1 C A1852 120.383 101.992 86.619 1.00 53.28 O
ATOM 4 OP2 C A1852 121.000 104.479 86.832 1.00 52.76 O
ATOM 5 O5' C A1852 118.741 103.766 86.041 1.00 54.36 O
ATOM 6 C5' C A1852 117.578 102.925 86.014 1.00 53.27 C
ATOM 7 C4' C A1852 117.144 102.681 84.592 1.00 52.42 C
ATOM 8 O4' C A1852 116.606 103.905 84.023 1.00 52.60 O
ATOM 9 C3' C A1852 118.232 102.214 83.631 1.00 52.42 C
ATOM 10 O3' C A1852 117.631 101.369 82.667 1.00 55.07 O
ATOM 11 C2' C A1852 118.634 103.508 82.932 1.00 52.30 C
ATOM 12 O2' C A1852 119.200 103.288 81.652 1.00 49.60 O
ATOM 13 C1' C A1852 117.272 104.190 82.812 1.00 51.66 C
ATOM 14 N1 C A1852 117.252 105.648 82.598 1.00 50.46 N
ATOM 15 C2 C A1852 116.188 106.197 81.875 1.00 48.81 C
ATOM 16 O2 C A1852 115.313 105.439 81.420 1.00 46.97 O
ATOM 17 N3 C A1852 116.139 107.537 81.688 1.00 48.52 N
ATOM 18 C4 C A1852 117.098 108.317 82.190 1.00 47.90 C
ATOM 19 N4 C A1852 116.998 109.630 81.999 1.00 47.47 N
ATOM 20 C5 C A1852 118.199 107.785 82.916 1.00 48.94 C
ATOM 21 C6 C A1852 118.237 106.457 83.097 1.00 50.41 C
ATOM 22 P A A1853 117.846 99.787 82.753 1.00 55.68 P
ATOM 23 OP1 A A1853 118.965 99.515 83.700 1.00 53.05 O
ATOM 24 OP2 A A1853 117.920 99.294 81.348 1.00 53.15 O
ATOM 25 O5' A A1853 116.494 99.245 83.394 1.00 53.91 O
TER
ATOM 1 O3' G B1896 124.164 107.908 78.699 1.00 47.36 O
ATOM 2 P U B1897 123.665 108.172 80.201 1.00 49.69 P
ATOM 3 OP1 U B1897 124.674 109.011 80.902 1.00 49.31 O
ATOM 4 OP2 U B1897 123.260 106.869 80.787 1.00 49.16 O
ATOM 5 O5' U B1897 122.355 109.049 79.998 1.00 50.91 O
ATOM 6 C5' U B1897 122.438 110.338 79.363 1.00 49.21 C
ATOM 7 C4' U B1897 121.059 110.871 79.072 1.00 46.65 C
ATOM 8 O4' U B1897 120.382 109.995 78.138 1.00 46.56 O
ATOM 9 C3' U B1897 120.103 110.946 80.247 1.00 44.13 C
ATOM 10 O3' U B1897 120.340 112.105 81.022 1.00 41.73 O
ATOM 11 C2' U B1897 118.761 111.010 79.540 1.00 44.23 C
ATOM 12 O2' U B1897 118.547 112.285 78.976 1.00 45.24 O
ATOM 13 C1' U B1897 118.987 110.025 78.394 1.00 45.80 C
ATOM 14 N1 U B1897 118.523 108.654 78.665 1.00 47.38 N
ATOM 15 C2 U B1897 117.210 108.352 78.360 1.00 46.50 C
ATOM 16 O2 U B1897 116.430 109.166 77.916 1.00 47.98 O
ATOM 17 N3 U B1897 116.842 107.055 78.596 1.00 48.33 N
ATOM 18 C4 U B1897 117.628 106.046 79.097 1.00 48.36 C
ATOM 19 O4 U B1897 117.152 104.919 79.217 1.00 49.20 O
ATOM 20 C5 U B1897 118.970 106.433 79.409 1.00 48.27 C
ATOM 21 C6 U B1897 119.363 107.692 79.190 1.00 48.05 C
ATOM 22 P C B1898 119.988 112.097 82.582 1.00 42.87 P
ATOM 23 OP1 C B1898 120.481 113.367 83.179 1.00 44.35 O
ATOM 24 OP2 C B1898 120.421 110.797 83.154 1.00 42.65 O
ATOM 25 O5' C B1898 118.399 112.135 82.611 1.00 44.86 O
TER
Atoms:
C2: (116.188,106.197,81.875)
OP1: (120.383,101.992,86.619)
OP2: (121.000,104.479,86.832)
C4: (117.098,108.317,82.190)
O5': (118.741,103.766,86.041)
C3': (118.232,102.214,83.631)
C1': (117.272,104.190,82.812)
O4': (116.606,103.905,84.023)
C5': (117.578,102.925,86.014)
P: (119.993,103.389,86.950)
O2: (115.313,105.439,81.420)
C4': (117.144,102.681,84.592)
C2': (118.634,103.508,82.932)
O2': (119.200,103.288,81.652)
N1: (117.252,105.648,82.598)
N3: (116.139,107.537,81.688)
N4: (116.998,109.630,81.999)
C6: (118.237,106.457,83.097)
C5: (118.199,107.785,82.916)
O3': (117.631,101.369,82.667)
OP1: (120.383,101.992,86.619)
OP2: (121.000,104.479,86.832)
C4: (117.098,108.317,82.190)
O5': (118.741,103.766,86.041)
C3': (118.232,102.214,83.631)
C1': (117.272,104.190,82.812)
O4': (116.606,103.905,84.023)
C5': (117.578,102.925,86.014)
P: (119.993,103.389,86.950)
O2: (115.313,105.439,81.420)
C4': (117.144,102.681,84.592)
C2': (118.634,103.508,82.932)
O2': (119.200,103.288,81.652)
N1: (117.252,105.648,82.598)
N3: (116.139,107.537,81.688)
N4: (116.998,109.630,81.999)
C6: (118.237,106.457,83.097)
C5: (118.199,107.785,82.916)
O3': (117.631,101.369,82.667)
C4: (117.628,106.046,79.097)
N3: (116.842,107.055,78.596)
OP1: (124.674,109.011,80.902)
OP2: (123.260,106.869,80.787)
C2: (117.210,108.352,78.360)
C1': (118.987,110.025,78.394)
C3': (120.103,110.946,80.247)
O5': (122.355,109.049,79.998)
O4': (120.382,109.995,78.138)
C5': (122.438,110.338,79.363)
P: (123.665,108.172,80.201)
C4': (121.059,110.871,79.072)
C2': (118.761,111.010,79.540)
O2': (118.547,112.285,78.976)
N1: (118.523,108.654,78.665)
O4: (117.152,104.919,79.217)
O2: (116.430,109.166,77.916)
C6: (119.363,107.692,79.190)
C5: (118.970,106.433,79.409)
O3': (120.340,112.105,81.022)
N3: (116.842,107.055,78.596)
OP1: (124.674,109.011,80.902)
OP2: (123.260,106.869,80.787)
C2: (117.210,108.352,78.360)
C1': (118.987,110.025,78.394)
C3': (120.103,110.946,80.247)
O5': (122.355,109.049,79.998)
O4': (120.382,109.995,78.138)
C5': (122.438,110.338,79.363)
P: (123.665,108.172,80.201)
C4': (121.059,110.871,79.072)
C2': (118.761,111.010,79.540)
O2': (118.547,112.285,78.976)
N1: (118.523,108.654,78.665)
O4: (117.152,104.919,79.217)
O2: (116.430,109.166,77.916)
C6: (119.363,107.692,79.190)
C5: (118.970,106.433,79.409)
O3': (120.340,112.105,81.022)
Image (generated by PyMOL):