Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01929:01930
Extra
PDB:
ATOM 1 O3' C A1928 91.411 112.830 111.443 1.00 52.89 O
ATOM 2 P C A1929 91.252 113.736 112.754 1.00 55.28 P
ATOM 3 OP1 C A1929 89.811 113.780 113.128 1.00 55.42 O
ATOM 4 OP2 C A1929 91.983 115.007 112.505 1.00 55.44 O
ATOM 5 O5' C A1929 92.008 112.904 113.879 1.00 54.98 O
ATOM 6 C5' C A1929 91.499 111.636 114.311 1.00 53.52 C
ATOM 7 C4' C A1929 92.576 110.861 115.022 1.00 53.57 C
ATOM 8 O4' C A1929 93.689 110.648 114.116 1.00 54.88 O
ATOM 9 C3' C A1929 93.209 111.545 116.221 1.00 52.39 C
ATOM 10 O3' C A1929 92.422 111.371 117.392 1.00 49.65 O
ATOM 11 C2' C A1929 94.543 110.822 116.327 1.00 53.71 C
ATOM 12 O2' C A1929 94.413 109.549 116.927 1.00 54.59 O
ATOM 13 C1' C A1929 94.901 110.643 114.850 1.00 54.77 C
ATOM 14 N1 C A1929 95.774 111.711 114.333 1.00 57.21 N
ATOM 15 C2 C A1929 97.163 111.553 114.437 1.00 58.27 C
ATOM 16 O2 C A1929 97.615 110.518 114.960 1.00 59.66 O
ATOM 17 N3 C A1929 97.976 112.529 113.967 1.00 58.27 N
ATOM 18 C4 C A1929 97.453 113.625 113.411 1.00 57.75 C
ATOM 19 N4 C A1929 98.294 114.560 112.957 1.00 56.91 N
ATOM 20 C5 C A1929 96.043 113.810 113.294 1.00 58.05 C
ATOM 21 C6 C A1929 95.249 112.840 113.763 1.00 57.54 C
ATOM 22 P U A1930 92.512 112.443 118.580 1.00 46.80 P
ATOM 23 OP1 U A1930 93.906 112.442 119.091 1.00 47.91 O
ATOM 24 OP2 U A1930 91.389 112.183 119.511 1.00 47.54 O
ATOM 25 O5' U A1930 92.262 113.835 117.851 1.00 46.13 O
TER
ATOM 1 O3' C B1929 92.422 111.371 117.392 1.00 49.65 O
ATOM 2 P U B1930 92.512 112.443 118.580 1.00 46.80 P
ATOM 3 OP1 U B1930 93.906 112.442 119.091 1.00 47.91 O
ATOM 4 OP2 U B1930 91.389 112.183 119.511 1.00 47.54 O
ATOM 5 O5' U B1930 92.262 113.835 117.851 1.00 46.13 O
ATOM 6 C5' U B1930 91.879 115.005 118.594 1.00 43.12 C
ATOM 7 C4' U B1930 92.310 116.249 117.857 1.00 41.62 C
ATOM 8 O4' U B1930 93.756 116.382 117.930 1.00 41.05 O
ATOM 9 C3' U B1930 91.955 116.282 116.372 1.00 40.64 C
ATOM 10 O3' U B1930 91.759 117.628 115.962 1.00 40.95 O
ATOM 11 C2' U B1930 93.245 115.785 115.732 1.00 40.40 C
ATOM 12 O2' U B1930 93.406 116.186 114.387 1.00 38.97 O
ATOM 13 C1' U B1930 94.279 116.464 116.627 1.00 39.25 C
ATOM 14 N1 U B1930 95.606 115.842 116.612 1.00 39.89 N
ATOM 15 C2 U B1930 96.600 116.477 115.879 1.00 40.68 C
ATOM 16 O2 U B1930 96.423 117.527 115.281 1.00 39.58 O
ATOM 17 N3 U B1930 97.815 115.840 115.882 1.00 41.09 N
ATOM 18 C4 U B1930 98.138 114.676 116.538 1.00 41.92 C
ATOM 19 O4 U B1930 99.305 114.290 116.528 1.00 44.54 O
ATOM 20 C5 U B1930 97.061 114.082 117.276 1.00 41.41 C
ATOM 21 C6 U B1930 95.862 114.672 117.288 1.00 39.97 C
ATOM 22 P U B1931 90.477 118.448 116.470 1.00 42.73 P
ATOM 23 OP1 U B1931 89.622 117.569 117.307 1.00 41.47 O
ATOM 24 OP2 U B1931 89.895 119.131 115.281 1.00 42.74 O
ATOM 25 O5' U B1931 91.106 119.554 117.422 1.00 41.82 O
TER
ATOM 2 P C A1929 91.252 113.736 112.754 1.00 55.28 P
ATOM 3 OP1 C A1929 89.811 113.780 113.128 1.00 55.42 O
ATOM 4 OP2 C A1929 91.983 115.007 112.505 1.00 55.44 O
ATOM 5 O5' C A1929 92.008 112.904 113.879 1.00 54.98 O
ATOM 6 C5' C A1929 91.499 111.636 114.311 1.00 53.52 C
ATOM 7 C4' C A1929 92.576 110.861 115.022 1.00 53.57 C
ATOM 8 O4' C A1929 93.689 110.648 114.116 1.00 54.88 O
ATOM 9 C3' C A1929 93.209 111.545 116.221 1.00 52.39 C
ATOM 10 O3' C A1929 92.422 111.371 117.392 1.00 49.65 O
ATOM 11 C2' C A1929 94.543 110.822 116.327 1.00 53.71 C
ATOM 12 O2' C A1929 94.413 109.549 116.927 1.00 54.59 O
ATOM 13 C1' C A1929 94.901 110.643 114.850 1.00 54.77 C
ATOM 14 N1 C A1929 95.774 111.711 114.333 1.00 57.21 N
ATOM 15 C2 C A1929 97.163 111.553 114.437 1.00 58.27 C
ATOM 16 O2 C A1929 97.615 110.518 114.960 1.00 59.66 O
ATOM 17 N3 C A1929 97.976 112.529 113.967 1.00 58.27 N
ATOM 18 C4 C A1929 97.453 113.625 113.411 1.00 57.75 C
ATOM 19 N4 C A1929 98.294 114.560 112.957 1.00 56.91 N
ATOM 20 C5 C A1929 96.043 113.810 113.294 1.00 58.05 C
ATOM 21 C6 C A1929 95.249 112.840 113.763 1.00 57.54 C
ATOM 22 P U A1930 92.512 112.443 118.580 1.00 46.80 P
ATOM 23 OP1 U A1930 93.906 112.442 119.091 1.00 47.91 O
ATOM 24 OP2 U A1930 91.389 112.183 119.511 1.00 47.54 O
ATOM 25 O5' U A1930 92.262 113.835 117.851 1.00 46.13 O
TER
ATOM 1 O3' C B1929 92.422 111.371 117.392 1.00 49.65 O
ATOM 2 P U B1930 92.512 112.443 118.580 1.00 46.80 P
ATOM 3 OP1 U B1930 93.906 112.442 119.091 1.00 47.91 O
ATOM 4 OP2 U B1930 91.389 112.183 119.511 1.00 47.54 O
ATOM 5 O5' U B1930 92.262 113.835 117.851 1.00 46.13 O
ATOM 6 C5' U B1930 91.879 115.005 118.594 1.00 43.12 C
ATOM 7 C4' U B1930 92.310 116.249 117.857 1.00 41.62 C
ATOM 8 O4' U B1930 93.756 116.382 117.930 1.00 41.05 O
ATOM 9 C3' U B1930 91.955 116.282 116.372 1.00 40.64 C
ATOM 10 O3' U B1930 91.759 117.628 115.962 1.00 40.95 O
ATOM 11 C2' U B1930 93.245 115.785 115.732 1.00 40.40 C
ATOM 12 O2' U B1930 93.406 116.186 114.387 1.00 38.97 O
ATOM 13 C1' U B1930 94.279 116.464 116.627 1.00 39.25 C
ATOM 14 N1 U B1930 95.606 115.842 116.612 1.00 39.89 N
ATOM 15 C2 U B1930 96.600 116.477 115.879 1.00 40.68 C
ATOM 16 O2 U B1930 96.423 117.527 115.281 1.00 39.58 O
ATOM 17 N3 U B1930 97.815 115.840 115.882 1.00 41.09 N
ATOM 18 C4 U B1930 98.138 114.676 116.538 1.00 41.92 C
ATOM 19 O4 U B1930 99.305 114.290 116.528 1.00 44.54 O
ATOM 20 C5 U B1930 97.061 114.082 117.276 1.00 41.41 C
ATOM 21 C6 U B1930 95.862 114.672 117.288 1.00 39.97 C
ATOM 22 P U B1931 90.477 118.448 116.470 1.00 42.73 P
ATOM 23 OP1 U B1931 89.622 117.569 117.307 1.00 41.47 O
ATOM 24 OP2 U B1931 89.895 119.131 115.281 1.00 42.74 O
ATOM 25 O5' U B1931 91.106 119.554 117.422 1.00 41.82 O
TER
Atoms:
C2: (97.163,111.553,114.437)
OP1: (89.811,113.780,113.128)
OP2: (91.983,115.007,112.505)
C4: (97.453,113.625,113.411)
O5': (92.008,112.904,113.879)
C3': (93.209,111.545,116.221)
C1': (94.901,110.643,114.850)
O4': (93.689,110.648,114.116)
C5': (91.499,111.636,114.311)
P: (91.252,113.736,112.754)
O2: (97.615,110.518,114.960)
C4': (92.576,110.861,115.022)
C2': (94.543,110.822,116.327)
O2': (94.413,109.549,116.927)
N1: (95.774,111.711,114.333)
N3: (97.976,112.529,113.967)
N4: (98.294,114.560,112.957)
C6: (95.249,112.840,113.763)
C5: (96.043,113.810,113.294)
O3': (92.422,111.371,117.392)
OP1: (89.811,113.780,113.128)
OP2: (91.983,115.007,112.505)
C4: (97.453,113.625,113.411)
O5': (92.008,112.904,113.879)
C3': (93.209,111.545,116.221)
C1': (94.901,110.643,114.850)
O4': (93.689,110.648,114.116)
C5': (91.499,111.636,114.311)
P: (91.252,113.736,112.754)
O2: (97.615,110.518,114.960)
C4': (92.576,110.861,115.022)
C2': (94.543,110.822,116.327)
O2': (94.413,109.549,116.927)
N1: (95.774,111.711,114.333)
N3: (97.976,112.529,113.967)
N4: (98.294,114.560,112.957)
C6: (95.249,112.840,113.763)
C5: (96.043,113.810,113.294)
O3': (92.422,111.371,117.392)
C4: (98.138,114.676,116.538)
N3: (97.815,115.840,115.882)
OP1: (93.906,112.442,119.091)
OP2: (91.389,112.183,119.511)
C2: (96.600,116.477,115.879)
C1': (94.279,116.464,116.627)
C3': (91.955,116.282,116.372)
O5': (92.262,113.835,117.851)
O4': (93.756,116.382,117.930)
C5': (91.879,115.005,118.594)
P: (92.512,112.443,118.580)
C4': (92.310,116.249,117.857)
C2': (93.245,115.785,115.732)
O2': (93.406,116.186,114.387)
N1: (95.606,115.842,116.612)
O4: (99.305,114.290,116.528)
O2: (96.423,117.527,115.281)
C6: (95.862,114.672,117.288)
C5: (97.061,114.082,117.276)
O3': (91.759,117.628,115.962)
N3: (97.815,115.840,115.882)
OP1: (93.906,112.442,119.091)
OP2: (91.389,112.183,119.511)
C2: (96.600,116.477,115.879)
C1': (94.279,116.464,116.627)
C3': (91.955,116.282,116.372)
O5': (92.262,113.835,117.851)
O4': (93.756,116.382,117.930)
C5': (91.879,115.005,118.594)
P: (92.512,112.443,118.580)
C4': (92.310,116.249,117.857)
C2': (93.245,115.785,115.732)
O2': (93.406,116.186,114.387)
N1: (95.606,115.842,116.612)
O4: (99.305,114.290,116.528)
O2: (96.423,117.527,115.281)
C6: (95.862,114.672,117.288)
C5: (97.061,114.082,117.276)
O3': (91.759,117.628,115.962)
Image (generated by PyMOL):