Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1828:A1829
Extra
PDB:
ATOM 1 O3' A A1827 104.950 136.091 58.147 1.00 41.68 O
ATOM 2 P C A1828 106.400 136.766 58.247 1.00 41.02 P
ATOM 3 OP1 C A1828 106.232 138.074 58.938 1.00 41.10 O
ATOM 4 OP2 C A1828 106.979 136.740 56.884 1.00 39.90 O
ATOM 5 O5' C A1828 107.207 135.789 59.223 1.00 40.78 O
ATOM 6 C5' C A1828 106.887 135.742 60.640 1.00 40.79 C
ATOM 7 C4' C A1828 107.687 134.665 61.353 1.00 40.99 C
ATOM 8 O4' C A1828 107.358 133.380 60.766 1.00 39.76 O
ATOM 9 C3' C A1828 109.206 134.753 61.241 1.00 42.90 C
ATOM 10 O3' C A1828 109.777 135.602 62.238 1.00 46.37 O
ATOM 11 C2' C A1828 109.631 133.309 61.461 1.00 41.44 C
ATOM 12 O2' C A1828 109.624 132.919 62.819 1.00 41.96 O
ATOM 13 C1' C A1828 108.512 132.563 60.743 1.00 38.30 C
ATOM 14 N1 C A1828 108.830 132.208 59.350 1.00 34.50 N
ATOM 15 C2 C A1828 109.575 131.063 59.131 1.00 32.94 C
ATOM 16 O2 C A1828 109.996 130.437 60.107 1.00 35.35 O
ATOM 17 N3 C A1828 109.828 130.666 57.872 1.00 31.01 N
ATOM 18 C4 C A1828 109.382 131.383 56.845 1.00 30.85 C
ATOM 19 N4 C A1828 109.642 130.933 55.618 1.00 30.38 N
ATOM 20 C5 C A1828 108.647 132.585 57.034 1.00 31.89 C
ATOM 21 C6 C A1828 108.394 132.959 58.295 1.00 34.03 C
ATOM 22 P U A1829 111.059 136.509 61.882 1.00 47.58 P
ATOM 23 OP1 U A1829 112.257 135.645 61.714 1.00 45.72 O
ATOM 24 OP2 U A1829 111.083 137.622 62.877 1.00 47.64 O
ATOM 25 O5' U A1829 110.709 137.113 60.453 1.00 46.47 O
TER
ATOM 1 O3' C B1828 109.777 135.602 62.238 1.00 46.37 O
ATOM 2 P U B1829 111.059 136.509 61.882 1.00 47.58 P
ATOM 3 OP1 U B1829 112.257 135.645 61.714 1.00 45.72 O
ATOM 4 OP2 U B1829 111.083 137.622 62.877 1.00 47.64 O
ATOM 5 O5' U B1829 110.709 137.113 60.453 1.00 46.47 O
ATOM 6 C5' U B1829 111.529 138.123 59.880 1.00 46.05 C
ATOM 7 C4' U B1829 111.676 137.901 58.399 1.00 45.18 C
ATOM 8 O4' U B1829 112.463 136.709 58.168 1.00 44.30 O
ATOM 9 C3' U B1829 110.395 137.721 57.588 1.00 45.19 C
ATOM 10 O3' U B1829 110.588 138.284 56.309 1.00 45.75 O
ATOM 11 C2' U B1829 110.343 136.218 57.355 1.00 45.78 C
ATOM 12 O2' U B1829 109.647 135.923 56.159 1.00 45.48 O
ATOM 13 C1' U B1829 111.830 135.912 57.192 1.00 45.62 C
ATOM 14 N1 U B1829 112.232 134.511 57.399 1.00 47.11 N
ATOM 15 C2 U B1829 112.356 133.705 56.282 1.00 46.73 C
ATOM 16 O2 U B1829 112.128 134.098 55.153 1.00 48.51 O
ATOM 17 N3 U B1829 112.747 132.415 56.537 1.00 46.14 N
ATOM 18 C4 U B1829 113.009 131.843 57.768 1.00 47.42 C
ATOM 19 O4 U B1829 113.257 130.637 57.834 1.00 48.31 O
ATOM 20 C5 U B1829 112.862 132.728 58.880 1.00 47.42 C
ATOM 21 C6 U B1829 112.487 134.003 58.668 1.00 48.40 C
ATOM 22 P C B1830 110.489 139.871 56.109 1.00 46.99 P
ATOM 23 OP1 C B1830 109.969 140.516 57.352 1.00 45.31 O
ATOM 24 OP2 C B1830 109.777 140.074 54.810 1.00 44.18 O
ATOM 25 O5' C B1830 112.015 140.332 55.991 1.00 49.73 O
TER
ATOM 2 P C A1828 106.400 136.766 58.247 1.00 41.02 P
ATOM 3 OP1 C A1828 106.232 138.074 58.938 1.00 41.10 O
ATOM 4 OP2 C A1828 106.979 136.740 56.884 1.00 39.90 O
ATOM 5 O5' C A1828 107.207 135.789 59.223 1.00 40.78 O
ATOM 6 C5' C A1828 106.887 135.742 60.640 1.00 40.79 C
ATOM 7 C4' C A1828 107.687 134.665 61.353 1.00 40.99 C
ATOM 8 O4' C A1828 107.358 133.380 60.766 1.00 39.76 O
ATOM 9 C3' C A1828 109.206 134.753 61.241 1.00 42.90 C
ATOM 10 O3' C A1828 109.777 135.602 62.238 1.00 46.37 O
ATOM 11 C2' C A1828 109.631 133.309 61.461 1.00 41.44 C
ATOM 12 O2' C A1828 109.624 132.919 62.819 1.00 41.96 O
ATOM 13 C1' C A1828 108.512 132.563 60.743 1.00 38.30 C
ATOM 14 N1 C A1828 108.830 132.208 59.350 1.00 34.50 N
ATOM 15 C2 C A1828 109.575 131.063 59.131 1.00 32.94 C
ATOM 16 O2 C A1828 109.996 130.437 60.107 1.00 35.35 O
ATOM 17 N3 C A1828 109.828 130.666 57.872 1.00 31.01 N
ATOM 18 C4 C A1828 109.382 131.383 56.845 1.00 30.85 C
ATOM 19 N4 C A1828 109.642 130.933 55.618 1.00 30.38 N
ATOM 20 C5 C A1828 108.647 132.585 57.034 1.00 31.89 C
ATOM 21 C6 C A1828 108.394 132.959 58.295 1.00 34.03 C
ATOM 22 P U A1829 111.059 136.509 61.882 1.00 47.58 P
ATOM 23 OP1 U A1829 112.257 135.645 61.714 1.00 45.72 O
ATOM 24 OP2 U A1829 111.083 137.622 62.877 1.00 47.64 O
ATOM 25 O5' U A1829 110.709 137.113 60.453 1.00 46.47 O
TER
ATOM 1 O3' C B1828 109.777 135.602 62.238 1.00 46.37 O
ATOM 2 P U B1829 111.059 136.509 61.882 1.00 47.58 P
ATOM 3 OP1 U B1829 112.257 135.645 61.714 1.00 45.72 O
ATOM 4 OP2 U B1829 111.083 137.622 62.877 1.00 47.64 O
ATOM 5 O5' U B1829 110.709 137.113 60.453 1.00 46.47 O
ATOM 6 C5' U B1829 111.529 138.123 59.880 1.00 46.05 C
ATOM 7 C4' U B1829 111.676 137.901 58.399 1.00 45.18 C
ATOM 8 O4' U B1829 112.463 136.709 58.168 1.00 44.30 O
ATOM 9 C3' U B1829 110.395 137.721 57.588 1.00 45.19 C
ATOM 10 O3' U B1829 110.588 138.284 56.309 1.00 45.75 O
ATOM 11 C2' U B1829 110.343 136.218 57.355 1.00 45.78 C
ATOM 12 O2' U B1829 109.647 135.923 56.159 1.00 45.48 O
ATOM 13 C1' U B1829 111.830 135.912 57.192 1.00 45.62 C
ATOM 14 N1 U B1829 112.232 134.511 57.399 1.00 47.11 N
ATOM 15 C2 U B1829 112.356 133.705 56.282 1.00 46.73 C
ATOM 16 O2 U B1829 112.128 134.098 55.153 1.00 48.51 O
ATOM 17 N3 U B1829 112.747 132.415 56.537 1.00 46.14 N
ATOM 18 C4 U B1829 113.009 131.843 57.768 1.00 47.42 C
ATOM 19 O4 U B1829 113.257 130.637 57.834 1.00 48.31 O
ATOM 20 C5 U B1829 112.862 132.728 58.880 1.00 47.42 C
ATOM 21 C6 U B1829 112.487 134.003 58.668 1.00 48.40 C
ATOM 22 P C B1830 110.489 139.871 56.109 1.00 46.99 P
ATOM 23 OP1 C B1830 109.969 140.516 57.352 1.00 45.31 O
ATOM 24 OP2 C B1830 109.777 140.074 54.810 1.00 44.18 O
ATOM 25 O5' C B1830 112.015 140.332 55.991 1.00 49.73 O
TER
Atoms:
C2: (109.575,131.063,59.131)
OP1: (106.232,138.074,58.938)
OP2: (106.979,136.740,56.884)
C4: (109.382,131.383,56.845)
O5': (107.207,135.789,59.223)
C3': (109.206,134.753,61.241)
C1': (108.512,132.563,60.743)
O4': (107.358,133.380,60.766)
C5': (106.887,135.742,60.640)
P: (106.400,136.766,58.247)
O2: (109.996,130.437,60.107)
C4': (107.687,134.665,61.353)
C2': (109.631,133.309,61.461)
O2': (109.624,132.919,62.819)
N1: (108.830,132.208,59.350)
N3: (109.828,130.666,57.872)
N4: (109.642,130.933,55.618)
C6: (108.394,132.959,58.295)
C5: (108.647,132.585,57.034)
O3': (109.777,135.602,62.238)
OP1: (106.232,138.074,58.938)
OP2: (106.979,136.740,56.884)
C4: (109.382,131.383,56.845)
O5': (107.207,135.789,59.223)
C3': (109.206,134.753,61.241)
C1': (108.512,132.563,60.743)
O4': (107.358,133.380,60.766)
C5': (106.887,135.742,60.640)
P: (106.400,136.766,58.247)
O2: (109.996,130.437,60.107)
C4': (107.687,134.665,61.353)
C2': (109.631,133.309,61.461)
O2': (109.624,132.919,62.819)
N1: (108.830,132.208,59.350)
N3: (109.828,130.666,57.872)
N4: (109.642,130.933,55.618)
C6: (108.394,132.959,58.295)
C5: (108.647,132.585,57.034)
O3': (109.777,135.602,62.238)
C4: (113.009,131.843,57.768)
N3: (112.747,132.415,56.537)
OP1: (112.257,135.645,61.714)
OP2: (111.083,137.622,62.877)
C2: (112.356,133.705,56.282)
C1': (111.830,135.912,57.192)
C3': (110.395,137.721,57.588)
O5': (110.709,137.113,60.453)
O4': (112.463,136.709,58.168)
C5': (111.529,138.123,59.880)
P: (111.059,136.509,61.882)
C4': (111.676,137.901,58.399)
C2': (110.343,136.218,57.355)
O2': (109.647,135.923,56.159)
N1: (112.232,134.511,57.399)
O4: (113.257,130.637,57.834)
O2: (112.128,134.098,55.153)
C6: (112.487,134.003,58.668)
C5: (112.862,132.728,58.880)
O3': (110.588,138.284,56.309)
N3: (112.747,132.415,56.537)
OP1: (112.257,135.645,61.714)
OP2: (111.083,137.622,62.877)
C2: (112.356,133.705,56.282)
C1': (111.830,135.912,57.192)
C3': (110.395,137.721,57.588)
O5': (110.709,137.113,60.453)
O4': (112.463,136.709,58.168)
C5': (111.529,138.123,59.880)
P: (111.059,136.509,61.882)
C4': (111.676,137.901,58.399)
C2': (110.343,136.218,57.355)
O2': (109.647,135.923,56.159)
N1: (112.232,134.511,57.399)
O4: (113.257,130.637,57.834)
O2: (112.128,134.098,55.153)
C6: (112.487,134.003,58.668)
C5: (112.862,132.728,58.880)
O3': (110.588,138.284,56.309)
Image (generated by PyMOL):