Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01852:01897
Extra
PDB:
ATOM 1 O3' C A1851 119.735 103.534 88.787 1.00 65.21 O
ATOM 2 P C A1852 120.330 103.574 87.289 1.00 67.46 P
ATOM 3 OP1 C A1852 120.754 102.184 86.958 1.00 66.38 O
ATOM 4 OP2 C A1852 121.311 104.691 87.175 1.00 67.06 O
ATOM 5 O5' C A1852 119.079 103.918 86.366 1.00 68.12 O
ATOM 6 C5' C A1852 117.934 103.049 86.336 1.00 69.41 C
ATOM 7 C4' C A1852 117.497 102.797 84.913 1.00 68.76 C
ATOM 8 O4' C A1852 116.925 104.011 84.361 1.00 67.90 O
ATOM 9 C3' C A1852 118.585 102.358 83.935 1.00 68.33 C
ATOM 10 O3' C A1852 117.979 101.517 82.953 1.00 69.70 O
ATOM 11 C2' C A1852 118.980 103.683 83.286 1.00 67.63 C
ATOM 12 O2' C A1852 119.579 103.551 82.009 1.00 66.62 O
ATOM 13 C1' C A1852 117.611 104.350 83.176 1.00 66.89 C
ATOM 14 N1 C A1852 117.569 105.810 83.022 1.00 64.89 N
ATOM 15 C2 C A1852 116.603 106.358 82.176 1.00 63.72 C
ATOM 16 O2 C A1852 115.833 105.594 81.566 1.00 61.21 O
ATOM 17 N3 C A1852 116.529 107.701 82.042 1.00 63.67 N
ATOM 18 C4 C A1852 117.366 108.486 82.717 1.00 62.81 C
ATOM 19 N4 C A1852 117.234 109.802 82.580 1.00 61.87 N
ATOM 20 C5 C A1852 118.370 107.955 83.572 1.00 64.59 C
ATOM 21 C6 C A1852 118.436 106.624 83.695 1.00 65.13 C
ATOM 22 P A A1853 118.159 99.922 83.038 1.00 70.78 P
ATOM 23 OP1 A A1853 119.374 99.636 83.850 1.00 70.06 O
ATOM 24 OP2 A A1853 118.044 99.376 81.656 1.00 69.05 O
ATOM 25 O5' A A1853 116.880 99.410 83.840 1.00 69.26 O
TER
ATOM 1 O3' G B1896 124.574 108.016 79.117 1.00 62.06 O
ATOM 2 P U B1897 124.125 108.296 80.633 1.00 62.85 P
ATOM 3 OP1 U B1897 125.147 109.157 81.293 1.00 63.66 O
ATOM 4 OP2 U B1897 123.757 106.991 81.246 1.00 62.38 O
ATOM 5 O5' U B1897 122.814 109.179 80.463 1.00 64.35 O
ATOM 6 C5' U B1897 122.902 110.488 79.872 1.00 63.17 C
ATOM 7 C4' U B1897 121.527 111.020 79.550 1.00 60.71 C
ATOM 8 O4' U B1897 120.865 110.147 78.603 1.00 60.53 O
ATOM 9 C3' U B1897 120.538 111.101 80.696 1.00 58.19 C
ATOM 10 O3' U B1897 120.758 112.254 81.474 1.00 56.05 O
ATOM 11 C2' U B1897 119.227 111.210 79.947 1.00 58.86 C
ATOM 12 O2' U B1897 119.093 112.501 79.390 1.00 59.83 O
ATOM 13 C1' U B1897 119.464 110.219 78.808 1.00 60.15 C
ATOM 14 N1 U B1897 118.951 108.865 79.068 1.00 61.11 N
ATOM 15 C2 U B1897 117.689 108.563 78.593 1.00 61.39 C
ATOM 16 O2 U B1897 116.990 109.375 78.013 1.00 63.31 O
ATOM 17 N3 U B1897 117.274 107.277 78.819 1.00 60.92 N
ATOM 18 C4 U B1897 117.970 106.283 79.460 1.00 60.55 C
ATOM 19 O4 U B1897 117.470 105.162 79.554 1.00 60.37 O
ATOM 20 C5 U B1897 119.258 106.675 79.946 1.00 60.96 C
ATOM 21 C6 U B1897 119.694 107.921 79.741 1.00 60.68 C
ATOM 22 P C B1898 120.394 112.228 83.026 1.00 55.30 P
ATOM 23 OP1 C B1898 120.946 113.465 83.638 1.00 56.62 O
ATOM 24 OP2 C B1898 120.780 110.897 83.566 1.00 54.91 O
ATOM 25 O5' C B1898 118.808 112.313 83.045 1.00 57.06 O
TER
ATOM 2 P C A1852 120.330 103.574 87.289 1.00 67.46 P
ATOM 3 OP1 C A1852 120.754 102.184 86.958 1.00 66.38 O
ATOM 4 OP2 C A1852 121.311 104.691 87.175 1.00 67.06 O
ATOM 5 O5' C A1852 119.079 103.918 86.366 1.00 68.12 O
ATOM 6 C5' C A1852 117.934 103.049 86.336 1.00 69.41 C
ATOM 7 C4' C A1852 117.497 102.797 84.913 1.00 68.76 C
ATOM 8 O4' C A1852 116.925 104.011 84.361 1.00 67.90 O
ATOM 9 C3' C A1852 118.585 102.358 83.935 1.00 68.33 C
ATOM 10 O3' C A1852 117.979 101.517 82.953 1.00 69.70 O
ATOM 11 C2' C A1852 118.980 103.683 83.286 1.00 67.63 C
ATOM 12 O2' C A1852 119.579 103.551 82.009 1.00 66.62 O
ATOM 13 C1' C A1852 117.611 104.350 83.176 1.00 66.89 C
ATOM 14 N1 C A1852 117.569 105.810 83.022 1.00 64.89 N
ATOM 15 C2 C A1852 116.603 106.358 82.176 1.00 63.72 C
ATOM 16 O2 C A1852 115.833 105.594 81.566 1.00 61.21 O
ATOM 17 N3 C A1852 116.529 107.701 82.042 1.00 63.67 N
ATOM 18 C4 C A1852 117.366 108.486 82.717 1.00 62.81 C
ATOM 19 N4 C A1852 117.234 109.802 82.580 1.00 61.87 N
ATOM 20 C5 C A1852 118.370 107.955 83.572 1.00 64.59 C
ATOM 21 C6 C A1852 118.436 106.624 83.695 1.00 65.13 C
ATOM 22 P A A1853 118.159 99.922 83.038 1.00 70.78 P
ATOM 23 OP1 A A1853 119.374 99.636 83.850 1.00 70.06 O
ATOM 24 OP2 A A1853 118.044 99.376 81.656 1.00 69.05 O
ATOM 25 O5' A A1853 116.880 99.410 83.840 1.00 69.26 O
TER
ATOM 1 O3' G B1896 124.574 108.016 79.117 1.00 62.06 O
ATOM 2 P U B1897 124.125 108.296 80.633 1.00 62.85 P
ATOM 3 OP1 U B1897 125.147 109.157 81.293 1.00 63.66 O
ATOM 4 OP2 U B1897 123.757 106.991 81.246 1.00 62.38 O
ATOM 5 O5' U B1897 122.814 109.179 80.463 1.00 64.35 O
ATOM 6 C5' U B1897 122.902 110.488 79.872 1.00 63.17 C
ATOM 7 C4' U B1897 121.527 111.020 79.550 1.00 60.71 C
ATOM 8 O4' U B1897 120.865 110.147 78.603 1.00 60.53 O
ATOM 9 C3' U B1897 120.538 111.101 80.696 1.00 58.19 C
ATOM 10 O3' U B1897 120.758 112.254 81.474 1.00 56.05 O
ATOM 11 C2' U B1897 119.227 111.210 79.947 1.00 58.86 C
ATOM 12 O2' U B1897 119.093 112.501 79.390 1.00 59.83 O
ATOM 13 C1' U B1897 119.464 110.219 78.808 1.00 60.15 C
ATOM 14 N1 U B1897 118.951 108.865 79.068 1.00 61.11 N
ATOM 15 C2 U B1897 117.689 108.563 78.593 1.00 61.39 C
ATOM 16 O2 U B1897 116.990 109.375 78.013 1.00 63.31 O
ATOM 17 N3 U B1897 117.274 107.277 78.819 1.00 60.92 N
ATOM 18 C4 U B1897 117.970 106.283 79.460 1.00 60.55 C
ATOM 19 O4 U B1897 117.470 105.162 79.554 1.00 60.37 O
ATOM 20 C5 U B1897 119.258 106.675 79.946 1.00 60.96 C
ATOM 21 C6 U B1897 119.694 107.921 79.741 1.00 60.68 C
ATOM 22 P C B1898 120.394 112.228 83.026 1.00 55.30 P
ATOM 23 OP1 C B1898 120.946 113.465 83.638 1.00 56.62 O
ATOM 24 OP2 C B1898 120.780 110.897 83.566 1.00 54.91 O
ATOM 25 O5' C B1898 118.808 112.313 83.045 1.00 57.06 O
TER
Atoms:
C2: (116.603,106.358,82.176)
OP1: (120.754,102.184,86.958)
OP2: (121.311,104.691,87.175)
C4: (117.366,108.486,82.717)
O5': (119.079,103.918,86.366)
C3': (118.585,102.358,83.935)
C1': (117.611,104.350,83.176)
O4': (116.925,104.011,84.361)
C5': (117.934,103.049,86.336)
P: (120.330,103.574,87.289)
O2: (115.833,105.594,81.566)
C4': (117.497,102.797,84.913)
C2': (118.980,103.683,83.286)
O2': (119.579,103.551,82.009)
N1: (117.569,105.810,83.022)
N3: (116.529,107.701,82.042)
N4: (117.234,109.802,82.580)
C6: (118.436,106.624,83.695)
C5: (118.370,107.955,83.572)
O3': (117.979,101.517,82.953)
OP1: (120.754,102.184,86.958)
OP2: (121.311,104.691,87.175)
C4: (117.366,108.486,82.717)
O5': (119.079,103.918,86.366)
C3': (118.585,102.358,83.935)
C1': (117.611,104.350,83.176)
O4': (116.925,104.011,84.361)
C5': (117.934,103.049,86.336)
P: (120.330,103.574,87.289)
O2: (115.833,105.594,81.566)
C4': (117.497,102.797,84.913)
C2': (118.980,103.683,83.286)
O2': (119.579,103.551,82.009)
N1: (117.569,105.810,83.022)
N3: (116.529,107.701,82.042)
N4: (117.234,109.802,82.580)
C6: (118.436,106.624,83.695)
C5: (118.370,107.955,83.572)
O3': (117.979,101.517,82.953)
C4: (117.970,106.283,79.460)
N3: (117.274,107.277,78.819)
OP1: (125.147,109.157,81.293)
OP2: (123.757,106.991,81.246)
C2: (117.689,108.563,78.593)
C1': (119.464,110.219,78.808)
C3': (120.538,111.101,80.696)
O5': (122.814,109.179,80.463)
O4': (120.865,110.147,78.603)
C5': (122.902,110.488,79.872)
P: (124.125,108.296,80.633)
C4': (121.527,111.020,79.550)
C2': (119.227,111.210,79.947)
O2': (119.093,112.501,79.390)
N1: (118.951,108.865,79.068)
O4: (117.470,105.162,79.554)
O2: (116.990,109.375,78.013)
C6: (119.694,107.921,79.741)
C5: (119.258,106.675,79.946)
O3': (120.758,112.254,81.474)
N3: (117.274,107.277,78.819)
OP1: (125.147,109.157,81.293)
OP2: (123.757,106.991,81.246)
C2: (117.689,108.563,78.593)
C1': (119.464,110.219,78.808)
C3': (120.538,111.101,80.696)
O5': (122.814,109.179,80.463)
O4': (120.865,110.147,78.603)
C5': (122.902,110.488,79.872)
P: (124.125,108.296,80.633)
C4': (121.527,111.020,79.550)
C2': (119.227,111.210,79.947)
O2': (119.093,112.501,79.390)
N1: (118.951,108.865,79.068)
O4: (117.470,105.162,79.554)
O2: (116.990,109.375,78.013)
C6: (119.694,107.921,79.741)
C5: (119.258,106.675,79.946)
O3': (120.758,112.254,81.474)
Image (generated by PyMOL):