Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01828:01829
Extra
PDB:
ATOM 1 O3' A A1827 105.010 136.069 57.852 1.00 37.92 O
ATOM 2 P C A1828 106.457 136.753 57.867 1.00 39.71 P
ATOM 3 OP1 C A1828 106.254 138.101 58.451 1.00 38.15 O
ATOM 4 OP2 C A1828 107.056 136.623 56.525 1.00 38.46 O
ATOM 5 O5' C A1828 107.293 135.851 58.883 1.00 39.08 O
ATOM 6 C5' C A1828 106.914 135.762 60.277 1.00 40.96 C
ATOM 7 C4' C A1828 107.701 134.673 60.975 1.00 41.46 C
ATOM 8 O4' C A1828 107.402 133.388 60.374 1.00 40.95 O
ATOM 9 C3' C A1828 109.211 134.778 60.861 1.00 42.20 C
ATOM 10 O3' C A1828 109.745 135.675 61.818 1.00 43.78 O
ATOM 11 C2' C A1828 109.664 133.346 61.095 1.00 40.09 C
ATOM 12 O2' C A1828 109.644 132.971 62.459 1.00 41.17 O
ATOM 13 C1' C A1828 108.567 132.579 60.369 1.00 37.01 C
ATOM 14 N1 C A1828 108.894 132.248 58.977 1.00 32.67 N
ATOM 15 C2 C A1828 109.630 131.093 58.726 1.00 31.07 C
ATOM 16 O2 C A1828 110.078 130.445 59.685 1.00 27.68 O
ATOM 17 N3 C A1828 109.850 130.717 57.447 1.00 31.02 N
ATOM 18 C4 C A1828 109.398 131.468 56.443 1.00 30.92 C
ATOM 19 N4 C A1828 109.632 131.048 55.200 1.00 29.99 N
ATOM 20 C5 C A1828 108.687 132.680 56.671 1.00 31.65 C
ATOM 21 C6 C A1828 108.461 133.030 57.942 1.00 31.80 C
ATOM 22 P U A1829 111.071 136.491 61.466 1.00 43.17 P
ATOM 23 OP1 U A1829 112.208 135.532 61.531 1.00 41.12 O
ATOM 24 OP2 U A1829 111.071 137.706 62.320 1.00 41.18 O
ATOM 25 O5' U A1829 110.846 136.905 59.947 1.00 40.85 O
TER
ATOM 1 O3' C B1828 109.745 135.675 61.818 1.00 43.78 O
ATOM 2 P U B1829 111.071 136.491 61.466 1.00 43.17 P
ATOM 3 OP1 U B1829 112.208 135.532 61.531 1.00 41.12 O
ATOM 4 OP2 U B1829 111.071 137.706 62.320 1.00 41.18 O
ATOM 5 O5' U B1829 110.846 136.905 59.947 1.00 40.85 O
ATOM 6 C5' U B1829 111.482 138.057 59.406 1.00 40.60 C
ATOM 7 C4' U B1829 111.694 137.883 57.933 1.00 39.29 C
ATOM 8 O4' U B1829 112.510 136.701 57.714 1.00 38.85 O
ATOM 9 C3' U B1829 110.431 137.682 57.105 1.00 40.47 C
ATOM 10 O3' U B1829 110.631 138.297 55.838 1.00 42.87 O
ATOM 11 C2' U B1829 110.388 136.165 56.933 1.00 39.83 C
ATOM 12 O2' U B1829 109.675 135.729 55.792 1.00 39.08 O
ATOM 13 C1' U B1829 111.872 135.863 56.778 1.00 38.31 C
ATOM 14 N1 U B1829 112.272 134.467 57.012 1.00 37.20 N
ATOM 15 C2 U B1829 112.443 133.674 55.902 1.00 36.46 C
ATOM 16 O2 U B1829 112.279 134.087 54.773 1.00 38.93 O
ATOM 17 N3 U B1829 112.817 132.379 56.159 1.00 36.02 N
ATOM 18 C4 U B1829 113.037 131.805 57.393 1.00 36.31 C
ATOM 19 O4 U B1829 113.348 130.614 57.463 1.00 34.53 O
ATOM 20 C5 U B1829 112.845 132.691 58.500 1.00 36.88 C
ATOM 21 C6 U B1829 112.474 133.962 58.277 1.00 38.04 C
ATOM 22 P C B1830 110.507 139.894 55.693 1.00 44.51 P
ATOM 23 OP1 C B1830 109.976 140.457 56.967 1.00 41.52 O
ATOM 24 OP2 C B1830 109.807 140.166 54.406 1.00 40.95 O
ATOM 25 O5' C B1830 112.018 140.394 55.590 1.00 45.39 O
TER
ATOM 2 P C A1828 106.457 136.753 57.867 1.00 39.71 P
ATOM 3 OP1 C A1828 106.254 138.101 58.451 1.00 38.15 O
ATOM 4 OP2 C A1828 107.056 136.623 56.525 1.00 38.46 O
ATOM 5 O5' C A1828 107.293 135.851 58.883 1.00 39.08 O
ATOM 6 C5' C A1828 106.914 135.762 60.277 1.00 40.96 C
ATOM 7 C4' C A1828 107.701 134.673 60.975 1.00 41.46 C
ATOM 8 O4' C A1828 107.402 133.388 60.374 1.00 40.95 O
ATOM 9 C3' C A1828 109.211 134.778 60.861 1.00 42.20 C
ATOM 10 O3' C A1828 109.745 135.675 61.818 1.00 43.78 O
ATOM 11 C2' C A1828 109.664 133.346 61.095 1.00 40.09 C
ATOM 12 O2' C A1828 109.644 132.971 62.459 1.00 41.17 O
ATOM 13 C1' C A1828 108.567 132.579 60.369 1.00 37.01 C
ATOM 14 N1 C A1828 108.894 132.248 58.977 1.00 32.67 N
ATOM 15 C2 C A1828 109.630 131.093 58.726 1.00 31.07 C
ATOM 16 O2 C A1828 110.078 130.445 59.685 1.00 27.68 O
ATOM 17 N3 C A1828 109.850 130.717 57.447 1.00 31.02 N
ATOM 18 C4 C A1828 109.398 131.468 56.443 1.00 30.92 C
ATOM 19 N4 C A1828 109.632 131.048 55.200 1.00 29.99 N
ATOM 20 C5 C A1828 108.687 132.680 56.671 1.00 31.65 C
ATOM 21 C6 C A1828 108.461 133.030 57.942 1.00 31.80 C
ATOM 22 P U A1829 111.071 136.491 61.466 1.00 43.17 P
ATOM 23 OP1 U A1829 112.208 135.532 61.531 1.00 41.12 O
ATOM 24 OP2 U A1829 111.071 137.706 62.320 1.00 41.18 O
ATOM 25 O5' U A1829 110.846 136.905 59.947 1.00 40.85 O
TER
ATOM 1 O3' C B1828 109.745 135.675 61.818 1.00 43.78 O
ATOM 2 P U B1829 111.071 136.491 61.466 1.00 43.17 P
ATOM 3 OP1 U B1829 112.208 135.532 61.531 1.00 41.12 O
ATOM 4 OP2 U B1829 111.071 137.706 62.320 1.00 41.18 O
ATOM 5 O5' U B1829 110.846 136.905 59.947 1.00 40.85 O
ATOM 6 C5' U B1829 111.482 138.057 59.406 1.00 40.60 C
ATOM 7 C4' U B1829 111.694 137.883 57.933 1.00 39.29 C
ATOM 8 O4' U B1829 112.510 136.701 57.714 1.00 38.85 O
ATOM 9 C3' U B1829 110.431 137.682 57.105 1.00 40.47 C
ATOM 10 O3' U B1829 110.631 138.297 55.838 1.00 42.87 O
ATOM 11 C2' U B1829 110.388 136.165 56.933 1.00 39.83 C
ATOM 12 O2' U B1829 109.675 135.729 55.792 1.00 39.08 O
ATOM 13 C1' U B1829 111.872 135.863 56.778 1.00 38.31 C
ATOM 14 N1 U B1829 112.272 134.467 57.012 1.00 37.20 N
ATOM 15 C2 U B1829 112.443 133.674 55.902 1.00 36.46 C
ATOM 16 O2 U B1829 112.279 134.087 54.773 1.00 38.93 O
ATOM 17 N3 U B1829 112.817 132.379 56.159 1.00 36.02 N
ATOM 18 C4 U B1829 113.037 131.805 57.393 1.00 36.31 C
ATOM 19 O4 U B1829 113.348 130.614 57.463 1.00 34.53 O
ATOM 20 C5 U B1829 112.845 132.691 58.500 1.00 36.88 C
ATOM 21 C6 U B1829 112.474 133.962 58.277 1.00 38.04 C
ATOM 22 P C B1830 110.507 139.894 55.693 1.00 44.51 P
ATOM 23 OP1 C B1830 109.976 140.457 56.967 1.00 41.52 O
ATOM 24 OP2 C B1830 109.807 140.166 54.406 1.00 40.95 O
ATOM 25 O5' C B1830 112.018 140.394 55.590 1.00 45.39 O
TER
Atoms:
C2: (109.630,131.093,58.726)
OP1: (106.254,138.101,58.451)
OP2: (107.056,136.623,56.525)
C4: (109.398,131.468,56.443)
O5': (107.293,135.851,58.883)
C3': (109.211,134.778,60.861)
C1': (108.567,132.579,60.369)
O4': (107.402,133.388,60.374)
C5': (106.914,135.762,60.277)
P: (106.457,136.753,57.867)
O2: (110.078,130.445,59.685)
C4': (107.701,134.673,60.975)
C2': (109.664,133.346,61.095)
O2': (109.644,132.971,62.459)
N1: (108.894,132.248,58.977)
N3: (109.850,130.717,57.447)
N4: (109.632,131.048,55.200)
C6: (108.461,133.030,57.942)
C5: (108.687,132.680,56.671)
O3': (109.745,135.675,61.818)
OP1: (106.254,138.101,58.451)
OP2: (107.056,136.623,56.525)
C4: (109.398,131.468,56.443)
O5': (107.293,135.851,58.883)
C3': (109.211,134.778,60.861)
C1': (108.567,132.579,60.369)
O4': (107.402,133.388,60.374)
C5': (106.914,135.762,60.277)
P: (106.457,136.753,57.867)
O2: (110.078,130.445,59.685)
C4': (107.701,134.673,60.975)
C2': (109.664,133.346,61.095)
O2': (109.644,132.971,62.459)
N1: (108.894,132.248,58.977)
N3: (109.850,130.717,57.447)
N4: (109.632,131.048,55.200)
C6: (108.461,133.030,57.942)
C5: (108.687,132.680,56.671)
O3': (109.745,135.675,61.818)
C4: (113.037,131.805,57.393)
N3: (112.817,132.379,56.159)
OP1: (112.208,135.532,61.531)
OP2: (111.071,137.706,62.320)
C2: (112.443,133.674,55.902)
C1': (111.872,135.863,56.778)
C3': (110.431,137.682,57.105)
O5': (110.846,136.905,59.947)
O4': (112.510,136.701,57.714)
C5': (111.482,138.057,59.406)
P: (111.071,136.491,61.466)
C4': (111.694,137.883,57.933)
C2': (110.388,136.165,56.933)
O2': (109.675,135.729,55.792)
N1: (112.272,134.467,57.012)
O4: (113.348,130.614,57.463)
O2: (112.279,134.087,54.773)
C6: (112.474,133.962,58.277)
C5: (112.845,132.691,58.500)
O3': (110.631,138.297,55.838)
N3: (112.817,132.379,56.159)
OP1: (112.208,135.532,61.531)
OP2: (111.071,137.706,62.320)
C2: (112.443,133.674,55.902)
C1': (111.872,135.863,56.778)
C3': (110.431,137.682,57.105)
O5': (110.846,136.905,59.947)
O4': (112.510,136.701,57.714)
C5': (111.482,138.057,59.406)
P: (111.071,136.491,61.466)
C4': (111.694,137.883,57.933)
C2': (110.388,136.165,56.933)
O2': (109.675,135.729,55.792)
N1: (112.272,134.467,57.012)
O4: (113.348,130.614,57.463)
O2: (112.279,134.087,54.773)
C6: (112.474,133.962,58.277)
C5: (112.845,132.691,58.500)
O3': (110.631,138.297,55.838)
Image (generated by PyMOL):