Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02232:02231
Extra
PDB:
ATOM 1 O3' U A2231 63.434 74.938 81.195 1.00 41.99 O
ATOM 2 P C A2232 62.878 76.435 81.132 1.00 42.51 P
ATOM 3 OP1 C A2232 63.270 76.992 79.812 1.00 39.87 O
ATOM 4 OP2 C A2232 63.320 77.109 82.379 1.00 41.83 O
ATOM 5 O5' C A2232 61.293 76.255 81.187 1.00 41.59 O
ATOM 6 C5' C A2232 60.463 77.229 81.845 1.00 40.85 C
ATOM 7 C4' C A2232 59.034 77.105 81.377 1.00 41.86 C
ATOM 8 O4' C A2232 58.979 77.325 79.941 1.00 42.26 O
ATOM 9 C3' C A2232 58.364 75.762 81.623 1.00 42.63 C
ATOM 10 O3' C A2232 56.977 75.987 81.833 1.00 43.23 O
ATOM 11 C2' C A2232 58.570 75.040 80.296 1.00 43.51 C
ATOM 12 O2' C A2232 57.587 74.048 80.065 1.00 43.75 O
ATOM 13 C1' C A2232 58.422 76.194 79.304 1.00 42.91 C
ATOM 14 N1 C A2232 59.119 75.987 78.017 1.00 42.99 N
ATOM 15 C2 C A2232 58.400 75.450 76.924 1.00 44.57 C
ATOM 16 O2 C A2232 57.192 75.169 77.063 1.00 46.86 O
ATOM 17 N3 C A2232 59.043 75.251 75.747 1.00 42.29 N
ATOM 18 C4 C A2232 60.336 75.557 75.632 1.00 41.05 C
ATOM 19 N4 C A2232 60.925 75.328 74.461 1.00 40.89 N
ATOM 20 C5 C A2232 61.082 76.108 76.714 1.00 41.41 C
ATOM 21 C6 C A2232 60.442 76.304 77.876 1.00 41.89 C
ATOM 22 P C A2233 56.384 75.996 83.325 1.00 44.07 P
ATOM 23 OP1 C A2233 55.759 77.331 83.538 1.00 44.12 O
ATOM 24 OP2 C A2233 57.424 75.519 84.270 1.00 43.83 O
ATOM 25 O5' C A2233 55.241 74.892 83.270 1.00 42.21 O
TER
ATOM 1 O3' U B2230 59.934 69.968 82.190 1.00 39.91 O
ATOM 2 P U B2231 59.552 71.525 82.165 1.00 41.10 P
ATOM 3 OP1 U B2231 59.503 72.052 83.550 1.00 40.62 O
ATOM 4 OP2 U B2231 58.358 71.659 81.290 1.00 40.25 O
ATOM 5 O5' U B2231 60.787 72.202 81.419 1.00 41.65 O
ATOM 6 C5' U B2231 62.130 72.088 81.933 1.00 39.49 C
ATOM 7 C4' U B2231 63.127 72.564 80.898 1.00 40.50 C
ATOM 8 O4' U B2231 63.063 71.712 79.726 1.00 42.42 O
ATOM 9 C3' U B2231 62.886 73.955 80.343 1.00 40.13 C
ATOM 10 O3' U B2231 63.434 74.938 81.195 1.00 41.99 O
ATOM 11 C2' U B2231 63.612 73.906 79.009 1.00 39.73 C
ATOM 12 O2' U B2231 65.007 74.045 79.152 1.00 40.29 O
ATOM 13 C1' U B2231 63.300 72.483 78.556 1.00 39.86 C
ATOM 14 N1 U B2231 62.117 72.394 77.685 1.00 39.48 N
ATOM 15 C2 U B2231 62.320 72.495 76.325 1.00 39.63 C
ATOM 16 O2 U B2231 63.421 72.667 75.836 1.00 40.14 O
ATOM 17 N3 U B2231 61.185 72.390 75.558 1.00 39.61 N
ATOM 18 C4 U B2231 59.893 72.198 76.007 1.00 40.00 C
ATOM 19 O4 U B2231 58.972 72.075 75.189 1.00 39.84 O
ATOM 20 C5 U B2231 59.767 72.116 77.429 1.00 39.67 C
ATOM 21 C6 U B2231 60.853 72.214 78.199 1.00 38.84 C
ATOM 22 P C B2232 62.878 76.435 81.132 1.00 42.51 P
ATOM 23 OP1 C B2232 63.270 76.992 79.812 1.00 39.87 O
ATOM 24 OP2 C B2232 63.320 77.109 82.379 1.00 41.83 O
ATOM 25 O5' C B2232 61.293 76.255 81.187 1.00 41.59 O
TER
ATOM 2 P C A2232 62.878 76.435 81.132 1.00 42.51 P
ATOM 3 OP1 C A2232 63.270 76.992 79.812 1.00 39.87 O
ATOM 4 OP2 C A2232 63.320 77.109 82.379 1.00 41.83 O
ATOM 5 O5' C A2232 61.293 76.255 81.187 1.00 41.59 O
ATOM 6 C5' C A2232 60.463 77.229 81.845 1.00 40.85 C
ATOM 7 C4' C A2232 59.034 77.105 81.377 1.00 41.86 C
ATOM 8 O4' C A2232 58.979 77.325 79.941 1.00 42.26 O
ATOM 9 C3' C A2232 58.364 75.762 81.623 1.00 42.63 C
ATOM 10 O3' C A2232 56.977 75.987 81.833 1.00 43.23 O
ATOM 11 C2' C A2232 58.570 75.040 80.296 1.00 43.51 C
ATOM 12 O2' C A2232 57.587 74.048 80.065 1.00 43.75 O
ATOM 13 C1' C A2232 58.422 76.194 79.304 1.00 42.91 C
ATOM 14 N1 C A2232 59.119 75.987 78.017 1.00 42.99 N
ATOM 15 C2 C A2232 58.400 75.450 76.924 1.00 44.57 C
ATOM 16 O2 C A2232 57.192 75.169 77.063 1.00 46.86 O
ATOM 17 N3 C A2232 59.043 75.251 75.747 1.00 42.29 N
ATOM 18 C4 C A2232 60.336 75.557 75.632 1.00 41.05 C
ATOM 19 N4 C A2232 60.925 75.328 74.461 1.00 40.89 N
ATOM 20 C5 C A2232 61.082 76.108 76.714 1.00 41.41 C
ATOM 21 C6 C A2232 60.442 76.304 77.876 1.00 41.89 C
ATOM 22 P C A2233 56.384 75.996 83.325 1.00 44.07 P
ATOM 23 OP1 C A2233 55.759 77.331 83.538 1.00 44.12 O
ATOM 24 OP2 C A2233 57.424 75.519 84.270 1.00 43.83 O
ATOM 25 O5' C A2233 55.241 74.892 83.270 1.00 42.21 O
TER
ATOM 1 O3' U B2230 59.934 69.968 82.190 1.00 39.91 O
ATOM 2 P U B2231 59.552 71.525 82.165 1.00 41.10 P
ATOM 3 OP1 U B2231 59.503 72.052 83.550 1.00 40.62 O
ATOM 4 OP2 U B2231 58.358 71.659 81.290 1.00 40.25 O
ATOM 5 O5' U B2231 60.787 72.202 81.419 1.00 41.65 O
ATOM 6 C5' U B2231 62.130 72.088 81.933 1.00 39.49 C
ATOM 7 C4' U B2231 63.127 72.564 80.898 1.00 40.50 C
ATOM 8 O4' U B2231 63.063 71.712 79.726 1.00 42.42 O
ATOM 9 C3' U B2231 62.886 73.955 80.343 1.00 40.13 C
ATOM 10 O3' U B2231 63.434 74.938 81.195 1.00 41.99 O
ATOM 11 C2' U B2231 63.612 73.906 79.009 1.00 39.73 C
ATOM 12 O2' U B2231 65.007 74.045 79.152 1.00 40.29 O
ATOM 13 C1' U B2231 63.300 72.483 78.556 1.00 39.86 C
ATOM 14 N1 U B2231 62.117 72.394 77.685 1.00 39.48 N
ATOM 15 C2 U B2231 62.320 72.495 76.325 1.00 39.63 C
ATOM 16 O2 U B2231 63.421 72.667 75.836 1.00 40.14 O
ATOM 17 N3 U B2231 61.185 72.390 75.558 1.00 39.61 N
ATOM 18 C4 U B2231 59.893 72.198 76.007 1.00 40.00 C
ATOM 19 O4 U B2231 58.972 72.075 75.189 1.00 39.84 O
ATOM 20 C5 U B2231 59.767 72.116 77.429 1.00 39.67 C
ATOM 21 C6 U B2231 60.853 72.214 78.199 1.00 38.84 C
ATOM 22 P C B2232 62.878 76.435 81.132 1.00 42.51 P
ATOM 23 OP1 C B2232 63.270 76.992 79.812 1.00 39.87 O
ATOM 24 OP2 C B2232 63.320 77.109 82.379 1.00 41.83 O
ATOM 25 O5' C B2232 61.293 76.255 81.187 1.00 41.59 O
TER
Atoms:
C2: (58.400,75.450,76.924)
OP1: (63.270,76.992,79.812)
OP2: (63.320,77.109,82.379)
C4: (60.336,75.557,75.632)
O5': (61.293,76.255,81.187)
C3': (58.364,75.762,81.623)
C1': (58.422,76.194,79.304)
O4': (58.979,77.325,79.941)
C5': (60.463,77.229,81.845)
P: (62.878,76.435,81.132)
O2: (57.192,75.169,77.063)
C4': (59.034,77.105,81.377)
C2': (58.570,75.040,80.296)
O2': (57.587,74.048,80.065)
N1: (59.119,75.987,78.017)
N3: (59.043,75.251,75.747)
N4: (60.925,75.328,74.461)
C6: (60.442,76.304,77.876)
C5: (61.082,76.108,76.714)
O3': (56.977,75.987,81.833)
OP1: (63.270,76.992,79.812)
OP2: (63.320,77.109,82.379)
C4: (60.336,75.557,75.632)
O5': (61.293,76.255,81.187)
C3': (58.364,75.762,81.623)
C1': (58.422,76.194,79.304)
O4': (58.979,77.325,79.941)
C5': (60.463,77.229,81.845)
P: (62.878,76.435,81.132)
O2: (57.192,75.169,77.063)
C4': (59.034,77.105,81.377)
C2': (58.570,75.040,80.296)
O2': (57.587,74.048,80.065)
N1: (59.119,75.987,78.017)
N3: (59.043,75.251,75.747)
N4: (60.925,75.328,74.461)
C6: (60.442,76.304,77.876)
C5: (61.082,76.108,76.714)
O3': (56.977,75.987,81.833)
C4: (59.893,72.198,76.007)
N3: (61.185,72.390,75.558)
OP1: (59.503,72.052,83.550)
OP2: (58.358,71.659,81.290)
C2: (62.320,72.495,76.325)
C1': (63.300,72.483,78.556)
C3': (62.886,73.955,80.343)
O5': (60.787,72.202,81.419)
O4': (63.063,71.712,79.726)
C5': (62.130,72.088,81.933)
P: (59.552,71.525,82.165)
C4': (63.127,72.564,80.898)
C2': (63.612,73.906,79.009)
O2': (65.007,74.045,79.152)
N1: (62.117,72.394,77.685)
O4: (58.972,72.075,75.189)
O2: (63.421,72.667,75.836)
C6: (60.853,72.214,78.199)
C5: (59.767,72.116,77.429)
O3': (63.434,74.938,81.195)
N3: (61.185,72.390,75.558)
OP1: (59.503,72.052,83.550)
OP2: (58.358,71.659,81.290)
C2: (62.320,72.495,76.325)
C1': (63.300,72.483,78.556)
C3': (62.886,73.955,80.343)
O5': (60.787,72.202,81.419)
O4': (63.063,71.712,79.726)
C5': (62.130,72.088,81.933)
P: (59.552,71.525,82.165)
C4': (63.127,72.564,80.898)
C2': (63.612,73.906,79.009)
O2': (65.007,74.045,79.152)
N1: (62.117,72.394,77.685)
O4: (58.972,72.075,75.189)
O2: (63.421,72.667,75.836)
C6: (60.853,72.214,78.199)
C5: (59.767,72.116,77.429)
O3': (63.434,74.938,81.195)
Image (generated by PyMOL):