ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1858:A1859

Extra

PDB:
ATOM 1 O3' C A1857 -92.622 -31.040 -2.658 1.00 6.53 O
ATOM 2 P C A1858 -92.570 -31.310 -4.242 1.00 30.58 P
ATOM 3 OP1 C A1858 -92.932 -32.731 -4.434 1.00 34.41 O
ATOM 4 OP2 C A1858 -91.278 -30.817 -4.766 1.00 34.41 O
ATOM 5 O5' C A1858 -93.769 -30.430 -4.816 1.00 25.01 O
ATOM 6 C5' C A1858 -95.134 -30.764 -4.482 1.00 25.01 C
ATOM 7 C4' C A1858 -96.113 -29.847 -5.191 1.00 25.01 C
ATOM 8 O4' C A1858 -96.234 -28.584 -4.500 1.00 25.01 O
ATOM 9 C3' C A1858 -95.820 -29.498 -6.640 1.00 25.01 C
ATOM 10 O3' C A1858 -96.312 -30.524 -7.502 1.00 25.01 O
ATOM 11 C2' C A1858 -96.601 -28.206 -6.825 1.00 25.01 C
ATOM 12 O2' C A1858 -97.949 -28.473 -7.146 1.00 25.01 O
ATOM 13 C1' C A1858 -96.499 -27.563 -5.435 1.00 25.01 C
ATOM 14 N1 C A1858 -95.422 -26.563 -5.337 1.00 31.93 N
ATOM 15 C2 C A1858 -95.714 -25.225 -5.623 1.00 31.93 C
ATOM 16 O2 C A1858 -96.884 -24.902 -5.910 1.00 31.93 O
ATOM 17 N3 C A1858 -94.719 -24.317 -5.583 1.00 31.93 N
ATOM 18 C4 C A1858 -93.477 -24.697 -5.279 1.00 31.93 C
ATOM 19 N4 C A1858 -92.525 -23.769 -5.301 1.00 31.93 N
ATOM 20 C5 C A1858 -93.158 -26.042 -4.956 1.00 31.93 C
ATOM 21 C6 C A1858 -94.149 -26.932 -4.993 1.00 31.93 C
ATOM 22 P U A1859 -95.861 -30.572 -9.044 1.00 31.33 P
ATOM 23 OP1 U A1859 -96.539 -29.439 -9.720 1.00 39.25 O
ATOM 24 OP2 U A1859 -96.090 -31.966 -9.512 1.00 39.25 O
ATOM 25 O5' U A1859 -94.295 -30.291 -9.029 1.00 22.04 O
TER

ATOM 1 O3' C B1858 -96.312 -30.524 -7.502 1.00 25.01 O
ATOM 2 P U B1859 -95.861 -30.572 -9.044 1.00 31.33 P
ATOM 3 OP1 U B1859 -96.539 -29.439 -9.720 1.00 39.25 O
ATOM 4 OP2 U B1859 -96.090 -31.966 -9.512 1.00 39.25 O
ATOM 5 O5' U B1859 -94.295 -30.291 -9.029 1.00 22.04 O
ATOM 6 C5' U B1859 -93.427 -30.939 -9.965 1.00 22.04 C
ATOM 7 C4' U B1859 -92.022 -30.433 -9.793 1.00 22.04 C
ATOM 8 O4' U B1859 -92.043 -29.001 -10.010 1.00 22.04 O
ATOM 9 C3' U B1859 -91.396 -30.658 -8.417 1.00 22.04 C
ATOM 10 O3' U B1859 -90.002 -30.899 -8.575 1.00 22.04 O
ATOM 11 C2' U B1859 -91.607 -29.310 -7.724 1.00 22.04 C
ATOM 12 O2' U B1859 -90.632 -28.964 -6.759 1.00 22.04 O
ATOM 13 C1' U B1859 -91.492 -28.345 -8.895 1.00 22.04 C
ATOM 14 N1 U B1859 -92.192 -27.068 -8.704 1.00 13.32 N
ATOM 15 C2 U B1859 -91.425 -25.961 -8.356 1.00 13.32 C
ATOM 16 O2 U B1859 -90.213 -26.007 -8.178 1.00 13.32 O
ATOM 17 N3 U B1859 -92.123 -24.796 -8.230 1.00 13.32 N
ATOM 18 C4 U B1859 -93.463 -24.618 -8.410 1.00 13.32 C
ATOM 19 O4 U B1859 -93.935 -23.487 -8.297 1.00 13.32 O
ATOM 20 C5 U B1859 -94.189 -25.808 -8.748 1.00 13.32 C
ATOM 21 C6 U B1859 -93.544 -26.962 -8.878 1.00 13.32 C
ATOM 22 P U B1860 -89.483 -32.313 -9.141 1.00 25.87 P
ATOM 23 OP1 U B1860 -90.652 -33.175 -9.464 1.00 60.39 O
ATOM 24 OP2 U B1860 -88.430 -32.808 -8.210 1.00 60.39 O
ATOM 25 O5' U B1860 -88.795 -31.921 -10.525 1.00 15.80 O
TER

Atoms:
C2: (-95.714,-25.225,-5.623)
OP1: (-92.932,-32.731,-4.434)
OP2: (-91.278,-30.817,-4.766)
C4: (-93.477,-24.697,-5.279)
O5': (-93.769,-30.430,-4.816)
C3': (-95.820,-29.498,-6.640)
C1': (-96.499,-27.563,-5.435)
O4': (-96.234,-28.584,-4.500)
C5': (-95.134,-30.764,-4.482)
P: (-92.570,-31.310,-4.242)
O2: (-96.884,-24.902,-5.910)
C4': (-96.113,-29.847,-5.191)
C2': (-96.601,-28.206,-6.825)
O2': (-97.949,-28.473,-7.146)
N1: (-95.422,-26.563,-5.337)
N3: (-94.719,-24.317,-5.583)
N4: (-92.525,-23.769,-5.301)
C6: (-94.149,-26.932,-4.993)
C5: (-93.158,-26.042,-4.956)
O3': (-96.312,-30.524,-7.502)
C4: (-93.463,-24.618,-8.410)
N3: (-92.123,-24.796,-8.230)
OP1: (-96.539,-29.439,-9.720)
OP2: (-96.090,-31.966,-9.512)
C2: (-91.425,-25.961,-8.356)
C1': (-91.492,-28.345,-8.895)
C3': (-91.396,-30.658,-8.417)
O5': (-94.295,-30.291,-9.029)
O4': (-92.043,-29.001,-10.010)
C5': (-93.427,-30.939,-9.965)
P: (-95.861,-30.572,-9.044)
C4': (-92.022,-30.433,-9.793)
C2': (-91.607,-29.310,-7.724)
O2': (-90.632,-28.964,-6.759)
N1: (-92.192,-27.068,-8.704)
O4: (-93.935,-23.487,-8.297)
O2: (-90.213,-26.007,-8.178)
C6: (-93.544,-26.962,-8.878)
C5: (-94.189,-25.808,-8.748)
O3': (-90.002,-30.899,-8.575)
Image (generated by PyMOL):
PyMOL image
show in jmol