Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:13140:13069
Extra
PDB:
ATOM 1 O3' U A3139 55.315 75.592 67.081 1.00 62.25 O
ATOM 2 P C A3140 56.841 75.900 66.701 1.00 78.59 P
ATOM 3 OP1 C A3140 57.633 74.759 67.232 1.00 78.05 O
ATOM 4 OP2 C A3140 57.165 77.296 67.166 1.00 79.37 O
ATOM 5 O5' C A3140 56.819 75.850 65.110 1.00 78.50 O
ATOM 6 C5' C A3140 56.858 74.615 64.425 1.00 77.83 C
ATOM 7 C4' C A3140 56.694 74.821 62.952 1.00 77.89 C
ATOM 8 O4' C A3140 55.472 75.534 62.707 1.00 78.22 O
ATOM 9 C3' C A3140 57.768 75.670 62.266 1.00 78.36 C
ATOM 10 O3' C A3140 58.923 74.913 61.903 1.00 78.00 O
ATOM 11 C2' C A3140 57.038 76.262 61.054 1.00 78.62 C
ATOM 12 O2' C A3140 57.204 75.430 59.908 1.00 78.18 O
ATOM 13 C1' C A3140 55.564 76.224 61.486 1.00 78.56 C
ATOM 14 N1 C A3140 54.989 77.561 61.650 1.00 79.26 N
ATOM 15 C2 C A3140 54.229 78.070 60.585 1.00 79.51 C
ATOM 16 O2 C A3140 54.068 77.396 59.552 1.00 79.14 O
ATOM 17 N3 C A3140 53.670 79.280 60.704 1.00 80.16 N
ATOM 18 C4 C A3140 53.865 79.955 61.826 1.00 80.55 C
ATOM 19 N4 C A3140 53.309 81.156 61.905 1.00 81.20 N
ATOM 20 C5 C A3140 54.631 79.462 62.918 1.00 80.31 C
ATOM 21 C6 C A3140 55.178 78.256 62.802 1.00 79.66 C
ATOM 22 P U A3141 60.321 75.144 62.657 1.00109.42 P
ATOM 23 OP1 U A3141 60.013 75.812 63.952 1.00109.79 O
ATOM 24 OP2 U A3141 61.230 75.834 61.699 1.00109.80 O
ATOM 25 O5' U A3141 60.823 73.643 62.917 1.00108.68 O
TER
ATOM 1 O3' A B3068 57.603 77.285 53.783 1.00 92.03 O
ATOM 2 P U B3069 57.796 78.889 53.938 1.00 92.65 P
ATOM 3 OP1 U B3069 57.669 79.456 52.568 1.00 93.00 O
ATOM 4 OP2 U B3069 59.042 79.162 54.695 1.00 92.82 O
ATOM 5 O5' U B3069 56.536 79.324 54.803 1.00 92.83 O
ATOM 6 C5' U B3069 55.341 79.786 54.176 1.00 93.07 C
ATOM 7 C4' U B3069 54.906 81.124 54.711 1.00 93.79 C
ATOM 8 O4' U B3069 54.726 81.019 56.136 1.00 93.69 O
ATOM 9 C3' U B3069 55.883 82.255 54.472 1.00 94.44 C
ATOM 10 O3' U B3069 55.408 83.240 53.492 1.00 95.02 O
ATOM 11 C2' U B3069 56.157 82.887 55.863 1.00 94.77 C
ATOM 12 O2' U B3069 55.968 84.291 55.931 1.00 95.57 O
ATOM 13 C1' U B3069 55.212 82.156 56.809 1.00 94.33 C
ATOM 14 N1 U B3069 55.866 81.698 58.086 1.00 94.07 N
ATOM 15 C2 U B3069 56.452 80.437 58.157 1.00 93.38 C
ATOM 16 O2 U B3069 56.522 79.630 57.254 1.00 92.95 O
ATOM 17 N3 U B3069 57.013 80.083 59.360 1.00 93.20 N
ATOM 18 C4 U B3069 57.070 80.813 60.517 1.00 93.61 C
ATOM 19 O4 U B3069 57.629 80.288 61.490 1.00 93.35 O
ATOM 20 C5 U B3069 56.449 82.104 60.404 1.00 94.32 C
ATOM 21 C6 U B3069 55.890 82.469 59.234 1.00 94.50 C
ATOM 22 P G B3070 53.855 83.665 53.281 1.00 81.53 P
ATOM 23 OP1 G B3070 53.800 84.444 52.016 1.00 82.03 O
ATOM 24 OP2 G B3070 53.422 84.337 54.549 1.00 81.87 O
ATOM 25 O5' G B3070 53.089 82.251 53.075 1.00 80.73 O
TER
ATOM 2 P C A3140 56.841 75.900 66.701 1.00 78.59 P
ATOM 3 OP1 C A3140 57.633 74.759 67.232 1.00 78.05 O
ATOM 4 OP2 C A3140 57.165 77.296 67.166 1.00 79.37 O
ATOM 5 O5' C A3140 56.819 75.850 65.110 1.00 78.50 O
ATOM 6 C5' C A3140 56.858 74.615 64.425 1.00 77.83 C
ATOM 7 C4' C A3140 56.694 74.821 62.952 1.00 77.89 C
ATOM 8 O4' C A3140 55.472 75.534 62.707 1.00 78.22 O
ATOM 9 C3' C A3140 57.768 75.670 62.266 1.00 78.36 C
ATOM 10 O3' C A3140 58.923 74.913 61.903 1.00 78.00 O
ATOM 11 C2' C A3140 57.038 76.262 61.054 1.00 78.62 C
ATOM 12 O2' C A3140 57.204 75.430 59.908 1.00 78.18 O
ATOM 13 C1' C A3140 55.564 76.224 61.486 1.00 78.56 C
ATOM 14 N1 C A3140 54.989 77.561 61.650 1.00 79.26 N
ATOM 15 C2 C A3140 54.229 78.070 60.585 1.00 79.51 C
ATOM 16 O2 C A3140 54.068 77.396 59.552 1.00 79.14 O
ATOM 17 N3 C A3140 53.670 79.280 60.704 1.00 80.16 N
ATOM 18 C4 C A3140 53.865 79.955 61.826 1.00 80.55 C
ATOM 19 N4 C A3140 53.309 81.156 61.905 1.00 81.20 N
ATOM 20 C5 C A3140 54.631 79.462 62.918 1.00 80.31 C
ATOM 21 C6 C A3140 55.178 78.256 62.802 1.00 79.66 C
ATOM 22 P U A3141 60.321 75.144 62.657 1.00109.42 P
ATOM 23 OP1 U A3141 60.013 75.812 63.952 1.00109.79 O
ATOM 24 OP2 U A3141 61.230 75.834 61.699 1.00109.80 O
ATOM 25 O5' U A3141 60.823 73.643 62.917 1.00108.68 O
TER
ATOM 1 O3' A B3068 57.603 77.285 53.783 1.00 92.03 O
ATOM 2 P U B3069 57.796 78.889 53.938 1.00 92.65 P
ATOM 3 OP1 U B3069 57.669 79.456 52.568 1.00 93.00 O
ATOM 4 OP2 U B3069 59.042 79.162 54.695 1.00 92.82 O
ATOM 5 O5' U B3069 56.536 79.324 54.803 1.00 92.83 O
ATOM 6 C5' U B3069 55.341 79.786 54.176 1.00 93.07 C
ATOM 7 C4' U B3069 54.906 81.124 54.711 1.00 93.79 C
ATOM 8 O4' U B3069 54.726 81.019 56.136 1.00 93.69 O
ATOM 9 C3' U B3069 55.883 82.255 54.472 1.00 94.44 C
ATOM 10 O3' U B3069 55.408 83.240 53.492 1.00 95.02 O
ATOM 11 C2' U B3069 56.157 82.887 55.863 1.00 94.77 C
ATOM 12 O2' U B3069 55.968 84.291 55.931 1.00 95.57 O
ATOM 13 C1' U B3069 55.212 82.156 56.809 1.00 94.33 C
ATOM 14 N1 U B3069 55.866 81.698 58.086 1.00 94.07 N
ATOM 15 C2 U B3069 56.452 80.437 58.157 1.00 93.38 C
ATOM 16 O2 U B3069 56.522 79.630 57.254 1.00 92.95 O
ATOM 17 N3 U B3069 57.013 80.083 59.360 1.00 93.20 N
ATOM 18 C4 U B3069 57.070 80.813 60.517 1.00 93.61 C
ATOM 19 O4 U B3069 57.629 80.288 61.490 1.00 93.35 O
ATOM 20 C5 U B3069 56.449 82.104 60.404 1.00 94.32 C
ATOM 21 C6 U B3069 55.890 82.469 59.234 1.00 94.50 C
ATOM 22 P G B3070 53.855 83.665 53.281 1.00 81.53 P
ATOM 23 OP1 G B3070 53.800 84.444 52.016 1.00 82.03 O
ATOM 24 OP2 G B3070 53.422 84.337 54.549 1.00 81.87 O
ATOM 25 O5' G B3070 53.089 82.251 53.075 1.00 80.73 O
TER
Atoms:
C2: (54.229,78.070,60.585)
OP1: (57.633,74.759,67.232)
OP2: (57.165,77.296,67.166)
C4: (53.865,79.955,61.826)
O5': (56.819,75.850,65.110)
C3': (57.768,75.670,62.266)
C1': (55.564,76.224,61.486)
O4': (55.472,75.534,62.707)
C5': (56.858,74.615,64.425)
P: (56.841,75.900,66.701)
O2: (54.068,77.396,59.552)
C4': (56.694,74.821,62.952)
C2': (57.038,76.262,61.054)
O2': (57.204,75.430,59.908)
N1: (54.989,77.561,61.650)
N3: (53.670,79.280,60.704)
N4: (53.309,81.156,61.905)
C6: (55.178,78.256,62.802)
C5: (54.631,79.462,62.918)
O3': (58.923,74.913,61.903)
OP1: (57.633,74.759,67.232)
OP2: (57.165,77.296,67.166)
C4: (53.865,79.955,61.826)
O5': (56.819,75.850,65.110)
C3': (57.768,75.670,62.266)
C1': (55.564,76.224,61.486)
O4': (55.472,75.534,62.707)
C5': (56.858,74.615,64.425)
P: (56.841,75.900,66.701)
O2: (54.068,77.396,59.552)
C4': (56.694,74.821,62.952)
C2': (57.038,76.262,61.054)
O2': (57.204,75.430,59.908)
N1: (54.989,77.561,61.650)
N3: (53.670,79.280,60.704)
N4: (53.309,81.156,61.905)
C6: (55.178,78.256,62.802)
C5: (54.631,79.462,62.918)
O3': (58.923,74.913,61.903)
C4: (57.070,80.813,60.517)
N3: (57.013,80.083,59.360)
OP1: (57.669,79.456,52.568)
OP2: (59.042,79.162,54.695)
C2: (56.452,80.437,58.157)
C1': (55.212,82.156,56.809)
C3': (55.883,82.255,54.472)
O5': (56.536,79.324,54.803)
O4': (54.726,81.019,56.136)
C5': (55.341,79.786,54.176)
P: (57.796,78.889,53.938)
C4': (54.906,81.124,54.711)
C2': (56.157,82.887,55.863)
O2': (55.968,84.291,55.931)
N1: (55.866,81.698,58.086)
O4: (57.629,80.288,61.490)
O2: (56.522,79.630,57.254)
C6: (55.890,82.469,59.234)
C5: (56.449,82.104,60.404)
O3': (55.408,83.240,53.492)
N3: (57.013,80.083,59.360)
OP1: (57.669,79.456,52.568)
OP2: (59.042,79.162,54.695)
C2: (56.452,80.437,58.157)
C1': (55.212,82.156,56.809)
C3': (55.883,82.255,54.472)
O5': (56.536,79.324,54.803)
O4': (54.726,81.019,56.136)
C5': (55.341,79.786,54.176)
P: (57.796,78.889,53.938)
C4': (54.906,81.124,54.711)
C2': (56.157,82.887,55.863)
O2': (55.968,84.291,55.931)
N1: (55.866,81.698,58.086)
O4: (57.629,80.288,61.490)
O2: (56.522,79.630,57.254)
C6: (55.890,82.469,59.234)
C5: (56.449,82.104,60.404)
O3': (55.408,83.240,53.492)
Image (generated by PyMOL):