Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02232:02231
Extra
PDB:
ATOM 1 O3' U A2231 63.431 75.099 81.328 1.00 33.33 O
ATOM 2 P C A2232 62.812 76.574 81.286 1.00 34.34 P
ATOM 3 OP1 C A2232 62.984 77.095 79.908 1.00 32.38 O
ATOM 4 OP2 C A2232 63.375 77.322 82.433 1.00 33.91 O
ATOM 5 O5' C A2232 61.261 76.338 81.564 1.00 33.42 O
ATOM 6 C5' C A2232 60.421 77.402 82.037 1.00 30.53 C
ATOM 7 C4' C A2232 59.024 77.244 81.487 1.00 32.18 C
ATOM 8 O4' C A2232 59.041 77.444 80.043 1.00 32.69 O
ATOM 9 C3' C A2232 58.375 75.885 81.718 1.00 33.07 C
ATOM 10 O3' C A2232 56.980 76.069 81.871 1.00 32.72 O
ATOM 11 C2' C A2232 58.641 75.168 80.400 1.00 34.63 C
ATOM 12 O2' C A2232 57.717 74.132 80.132 1.00 35.52 O
ATOM 13 C1' C A2232 58.484 76.318 79.404 1.00 33.55 C
ATOM 14 N1 C A2232 59.188 76.098 78.129 1.00 35.04 N
ATOM 15 C2 C A2232 58.474 75.546 77.052 1.00 35.24 C
ATOM 16 O2 C A2232 57.268 75.284 77.195 1.00 36.89 O
ATOM 17 N3 C A2232 59.114 75.309 75.888 1.00 34.98 N
ATOM 18 C4 C A2232 60.409 75.594 75.768 1.00 34.24 C
ATOM 19 N4 C A2232 60.994 75.324 74.606 1.00 36.41 N
ATOM 20 C5 C A2232 61.159 76.166 76.836 1.00 35.62 C
ATOM 21 C6 C A2232 60.514 76.403 77.989 1.00 35.61 C
ATOM 22 P C A2233 56.336 76.081 83.337 1.00 31.84 P
ATOM 23 OP1 C A2233 55.584 77.348 83.468 1.00 32.58 O
ATOM 24 OP2 C A2233 57.373 75.739 84.339 1.00 31.97 O
ATOM 25 O5' C A2233 55.256 74.915 83.282 1.00 34.15 O
TER
ATOM 1 O3' U B2230 59.889 70.012 82.301 1.00 34.42 O
ATOM 2 P U B2231 59.530 71.573 82.281 1.00 32.91 P
ATOM 3 OP1 U B2231 59.495 72.084 83.671 1.00 30.41 O
ATOM 4 OP2 U B2231 58.327 71.703 81.420 1.00 31.62 O
ATOM 5 O5' U B2231 60.770 72.241 81.535 1.00 33.70 O
ATOM 6 C5' U B2231 62.087 72.243 82.117 1.00 29.35 C
ATOM 7 C4' U B2231 63.105 72.704 81.097 1.00 31.50 C
ATOM 8 O4' U B2231 63.057 71.821 79.949 1.00 32.31 O
ATOM 9 C3' U B2231 62.882 74.086 80.502 1.00 32.77 C
ATOM 10 O3' U B2231 63.431 75.099 81.328 1.00 33.33 O
ATOM 11 C2' U B2231 63.616 73.995 79.173 1.00 32.35 C
ATOM 12 O2' U B2231 65.010 74.145 79.329 1.00 35.29 O
ATOM 13 C1' U B2231 63.311 72.555 78.763 1.00 31.74 C
ATOM 14 N1 U B2231 62.146 72.419 77.875 1.00 32.22 N
ATOM 15 C2 U B2231 62.383 72.368 76.517 1.00 32.88 C
ATOM 16 O2 U B2231 63.501 72.450 76.037 1.00 33.41 O
ATOM 17 N3 U B2231 61.261 72.222 75.737 1.00 32.45 N
ATOM 18 C4 U B2231 59.952 72.133 76.166 1.00 31.17 C
ATOM 19 O4 U B2231 59.045 71.992 75.333 1.00 30.74 O
ATOM 20 C5 U B2231 59.786 72.208 77.585 1.00 29.30 C
ATOM 21 C6 U B2231 60.858 72.342 78.370 1.00 31.29 C
ATOM 22 P C B2232 62.812 76.574 81.286 1.00 34.34 P
ATOM 23 OP1 C B2232 62.984 77.095 79.908 1.00 32.38 O
ATOM 24 OP2 C B2232 63.375 77.322 82.433 1.00 33.91 O
ATOM 25 O5' C B2232 61.261 76.338 81.564 1.00 33.42 O
TER
ATOM 2 P C A2232 62.812 76.574 81.286 1.00 34.34 P
ATOM 3 OP1 C A2232 62.984 77.095 79.908 1.00 32.38 O
ATOM 4 OP2 C A2232 63.375 77.322 82.433 1.00 33.91 O
ATOM 5 O5' C A2232 61.261 76.338 81.564 1.00 33.42 O
ATOM 6 C5' C A2232 60.421 77.402 82.037 1.00 30.53 C
ATOM 7 C4' C A2232 59.024 77.244 81.487 1.00 32.18 C
ATOM 8 O4' C A2232 59.041 77.444 80.043 1.00 32.69 O
ATOM 9 C3' C A2232 58.375 75.885 81.718 1.00 33.07 C
ATOM 10 O3' C A2232 56.980 76.069 81.871 1.00 32.72 O
ATOM 11 C2' C A2232 58.641 75.168 80.400 1.00 34.63 C
ATOM 12 O2' C A2232 57.717 74.132 80.132 1.00 35.52 O
ATOM 13 C1' C A2232 58.484 76.318 79.404 1.00 33.55 C
ATOM 14 N1 C A2232 59.188 76.098 78.129 1.00 35.04 N
ATOM 15 C2 C A2232 58.474 75.546 77.052 1.00 35.24 C
ATOM 16 O2 C A2232 57.268 75.284 77.195 1.00 36.89 O
ATOM 17 N3 C A2232 59.114 75.309 75.888 1.00 34.98 N
ATOM 18 C4 C A2232 60.409 75.594 75.768 1.00 34.24 C
ATOM 19 N4 C A2232 60.994 75.324 74.606 1.00 36.41 N
ATOM 20 C5 C A2232 61.159 76.166 76.836 1.00 35.62 C
ATOM 21 C6 C A2232 60.514 76.403 77.989 1.00 35.61 C
ATOM 22 P C A2233 56.336 76.081 83.337 1.00 31.84 P
ATOM 23 OP1 C A2233 55.584 77.348 83.468 1.00 32.58 O
ATOM 24 OP2 C A2233 57.373 75.739 84.339 1.00 31.97 O
ATOM 25 O5' C A2233 55.256 74.915 83.282 1.00 34.15 O
TER
ATOM 1 O3' U B2230 59.889 70.012 82.301 1.00 34.42 O
ATOM 2 P U B2231 59.530 71.573 82.281 1.00 32.91 P
ATOM 3 OP1 U B2231 59.495 72.084 83.671 1.00 30.41 O
ATOM 4 OP2 U B2231 58.327 71.703 81.420 1.00 31.62 O
ATOM 5 O5' U B2231 60.770 72.241 81.535 1.00 33.70 O
ATOM 6 C5' U B2231 62.087 72.243 82.117 1.00 29.35 C
ATOM 7 C4' U B2231 63.105 72.704 81.097 1.00 31.50 C
ATOM 8 O4' U B2231 63.057 71.821 79.949 1.00 32.31 O
ATOM 9 C3' U B2231 62.882 74.086 80.502 1.00 32.77 C
ATOM 10 O3' U B2231 63.431 75.099 81.328 1.00 33.33 O
ATOM 11 C2' U B2231 63.616 73.995 79.173 1.00 32.35 C
ATOM 12 O2' U B2231 65.010 74.145 79.329 1.00 35.29 O
ATOM 13 C1' U B2231 63.311 72.555 78.763 1.00 31.74 C
ATOM 14 N1 U B2231 62.146 72.419 77.875 1.00 32.22 N
ATOM 15 C2 U B2231 62.383 72.368 76.517 1.00 32.88 C
ATOM 16 O2 U B2231 63.501 72.450 76.037 1.00 33.41 O
ATOM 17 N3 U B2231 61.261 72.222 75.737 1.00 32.45 N
ATOM 18 C4 U B2231 59.952 72.133 76.166 1.00 31.17 C
ATOM 19 O4 U B2231 59.045 71.992 75.333 1.00 30.74 O
ATOM 20 C5 U B2231 59.786 72.208 77.585 1.00 29.30 C
ATOM 21 C6 U B2231 60.858 72.342 78.370 1.00 31.29 C
ATOM 22 P C B2232 62.812 76.574 81.286 1.00 34.34 P
ATOM 23 OP1 C B2232 62.984 77.095 79.908 1.00 32.38 O
ATOM 24 OP2 C B2232 63.375 77.322 82.433 1.00 33.91 O
ATOM 25 O5' C B2232 61.261 76.338 81.564 1.00 33.42 O
TER
Atoms:
C2: (58.474,75.546,77.052)
OP1: (62.984,77.095,79.908)
OP2: (63.375,77.322,82.433)
C4: (60.409,75.594,75.768)
O5': (61.261,76.338,81.564)
C3': (58.375,75.885,81.718)
C1': (58.484,76.318,79.404)
O4': (59.041,77.444,80.043)
C5': (60.421,77.402,82.037)
P: (62.812,76.574,81.286)
O2: (57.268,75.284,77.195)
C4': (59.024,77.244,81.487)
C2': (58.641,75.168,80.400)
O2': (57.717,74.132,80.132)
N1: (59.188,76.098,78.129)
N3: (59.114,75.309,75.888)
N4: (60.994,75.324,74.606)
C6: (60.514,76.403,77.989)
C5: (61.159,76.166,76.836)
O3': (56.980,76.069,81.871)
OP1: (62.984,77.095,79.908)
OP2: (63.375,77.322,82.433)
C4: (60.409,75.594,75.768)
O5': (61.261,76.338,81.564)
C3': (58.375,75.885,81.718)
C1': (58.484,76.318,79.404)
O4': (59.041,77.444,80.043)
C5': (60.421,77.402,82.037)
P: (62.812,76.574,81.286)
O2: (57.268,75.284,77.195)
C4': (59.024,77.244,81.487)
C2': (58.641,75.168,80.400)
O2': (57.717,74.132,80.132)
N1: (59.188,76.098,78.129)
N3: (59.114,75.309,75.888)
N4: (60.994,75.324,74.606)
C6: (60.514,76.403,77.989)
C5: (61.159,76.166,76.836)
O3': (56.980,76.069,81.871)
C4: (59.952,72.133,76.166)
N3: (61.261,72.222,75.737)
OP1: (59.495,72.084,83.671)
OP2: (58.327,71.703,81.420)
C2: (62.383,72.368,76.517)
C1': (63.311,72.555,78.763)
C3': (62.882,74.086,80.502)
O5': (60.770,72.241,81.535)
O4': (63.057,71.821,79.949)
C5': (62.087,72.243,82.117)
P: (59.530,71.573,82.281)
C4': (63.105,72.704,81.097)
C2': (63.616,73.995,79.173)
O2': (65.010,74.145,79.329)
N1: (62.146,72.419,77.875)
O4: (59.045,71.992,75.333)
O2: (63.501,72.450,76.037)
C6: (60.858,72.342,78.370)
C5: (59.786,72.208,77.585)
O3': (63.431,75.099,81.328)
N3: (61.261,72.222,75.737)
OP1: (59.495,72.084,83.671)
OP2: (58.327,71.703,81.420)
C2: (62.383,72.368,76.517)
C1': (63.311,72.555,78.763)
C3': (62.882,74.086,80.502)
O5': (60.770,72.241,81.535)
O4': (63.057,71.821,79.949)
C5': (62.087,72.243,82.117)
P: (59.530,71.573,82.281)
C4': (63.105,72.704,81.097)
C2': (63.616,73.995,79.173)
O2': (65.010,74.145,79.329)
N1: (62.146,72.419,77.875)
O4: (59.045,71.992,75.333)
O2: (63.501,72.450,76.037)
C6: (60.858,72.342,78.370)
C5: (59.786,72.208,77.585)
O3': (63.431,75.099,81.328)
Image (generated by PyMOL):