Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1852:A1897
Extra
PDB:
ATOM 1 O3' C A1851 119.461 103.510 88.835 1.00 61.09 O
ATOM 2 P C A1852 120.095 103.517 87.383 1.00 62.86 P
ATOM 3 OP1 C A1852 120.480 102.101 87.172 1.00 63.87 O
ATOM 4 OP2 C A1852 121.127 104.585 87.347 1.00 62.92 O
ATOM 5 O5' C A1852 118.874 103.889 86.430 1.00 63.91 O
ATOM 6 C5' C A1852 117.716 103.039 86.379 1.00 65.11 C
ATOM 7 C4' C A1852 117.343 102.742 84.953 1.00 65.39 C
ATOM 8 O4' C A1852 116.744 103.910 84.347 1.00 65.25 O
ATOM 9 C3' C A1852 118.464 102.318 84.009 1.00 64.79 C
ATOM 10 O3' C A1852 117.851 101.497 83.041 1.00 65.43 O
ATOM 11 C2' C A1852 118.822 103.622 83.318 1.00 64.30 C
ATOM 12 O2' C A1852 119.425 103.504 82.040 1.00 63.59 O
ATOM 13 C1' C A1852 117.426 104.199 83.148 1.00 64.41 C
ATOM 14 N1 C A1852 117.367 105.628 82.931 1.00 63.15 N
ATOM 15 C2 C A1852 116.321 106.121 82.187 1.00 62.16 C
ATOM 16 O2 C A1852 115.499 105.326 81.701 1.00 59.93 O
ATOM 17 N3 C A1852 116.221 107.439 82.004 1.00 63.09 N
ATOM 18 C4 C A1852 117.125 108.260 82.535 1.00 63.60 C
ATOM 19 N4 C A1852 116.964 109.560 82.343 1.00 63.93 N
ATOM 20 C5 C A1852 118.223 107.783 83.287 1.00 63.60 C
ATOM 21 C6 C A1852 118.307 106.467 83.459 1.00 64.02 C
ATOM 22 P A A1853 118.053 99.927 83.116 1.00 65.70 P
ATOM 23 OP1 A A1853 119.259 99.779 83.973 1.00 64.22 O
ATOM 24 OP2 A A1853 118.051 99.379 81.733 1.00 64.95 O
ATOM 25 O5' A A1853 116.762 99.372 83.878 1.00 64.71 O
TER
ATOM 1 O3' G B1896 124.380 108.039 79.139 1.00 58.08 O
ATOM 2 P U B1897 123.925 108.466 80.629 1.00 56.46 P
ATOM 3 OP1 U B1897 124.910 109.445 81.171 1.00 56.08 O
ATOM 4 OP2 U B1897 123.622 107.231 81.394 1.00 56.00 O
ATOM 5 O5' U B1897 122.587 109.291 80.389 1.00 57.93 O
ATOM 6 C5' U B1897 122.610 110.512 79.620 1.00 57.55 C
ATOM 7 C4' U B1897 121.206 110.998 79.354 1.00 55.85 C
ATOM 8 O4' U B1897 120.505 110.058 78.487 1.00 57.37 O
ATOM 9 C3' U B1897 120.296 111.142 80.562 1.00 54.57 C
ATOM 10 O3' U B1897 120.532 112.342 81.302 1.00 50.70 O
ATOM 11 C2' U B1897 118.929 111.131 79.900 1.00 55.10 C
ATOM 12 O2' U B1897 118.741 112.395 79.293 1.00 55.64 O
ATOM 13 C1' U B1897 119.119 110.068 78.805 1.00 57.30 C
ATOM 14 N1 U B1897 118.663 108.679 79.066 1.00 58.69 N
ATOM 15 C2 U B1897 117.322 108.347 78.795 1.00 59.04 C
ATOM 16 O2 U B1897 116.507 109.146 78.368 1.00 60.69 O
ATOM 17 N3 U B1897 116.973 107.037 79.039 1.00 58.52 N
ATOM 18 C4 U B1897 117.783 106.040 79.506 1.00 58.70 C
ATOM 19 O4 U B1897 117.301 104.925 79.705 1.00 58.30 O
ATOM 20 C5 U B1897 119.144 106.442 79.761 1.00 59.04 C
ATOM 21 C6 U B1897 119.524 107.714 79.544 1.00 58.48 C
ATOM 22 P C B1898 120.264 112.353 82.885 1.00 48.92 P
ATOM 23 OP1 C B1898 120.719 113.622 83.529 1.00 50.57 O
ATOM 24 OP2 C B1898 120.750 111.064 83.403 1.00 47.59 O
ATOM 25 O5' C B1898 118.683 112.359 82.987 1.00 50.21 O
TER
ATOM 2 P C A1852 120.095 103.517 87.383 1.00 62.86 P
ATOM 3 OP1 C A1852 120.480 102.101 87.172 1.00 63.87 O
ATOM 4 OP2 C A1852 121.127 104.585 87.347 1.00 62.92 O
ATOM 5 O5' C A1852 118.874 103.889 86.430 1.00 63.91 O
ATOM 6 C5' C A1852 117.716 103.039 86.379 1.00 65.11 C
ATOM 7 C4' C A1852 117.343 102.742 84.953 1.00 65.39 C
ATOM 8 O4' C A1852 116.744 103.910 84.347 1.00 65.25 O
ATOM 9 C3' C A1852 118.464 102.318 84.009 1.00 64.79 C
ATOM 10 O3' C A1852 117.851 101.497 83.041 1.00 65.43 O
ATOM 11 C2' C A1852 118.822 103.622 83.318 1.00 64.30 C
ATOM 12 O2' C A1852 119.425 103.504 82.040 1.00 63.59 O
ATOM 13 C1' C A1852 117.426 104.199 83.148 1.00 64.41 C
ATOM 14 N1 C A1852 117.367 105.628 82.931 1.00 63.15 N
ATOM 15 C2 C A1852 116.321 106.121 82.187 1.00 62.16 C
ATOM 16 O2 C A1852 115.499 105.326 81.701 1.00 59.93 O
ATOM 17 N3 C A1852 116.221 107.439 82.004 1.00 63.09 N
ATOM 18 C4 C A1852 117.125 108.260 82.535 1.00 63.60 C
ATOM 19 N4 C A1852 116.964 109.560 82.343 1.00 63.93 N
ATOM 20 C5 C A1852 118.223 107.783 83.287 1.00 63.60 C
ATOM 21 C6 C A1852 118.307 106.467 83.459 1.00 64.02 C
ATOM 22 P A A1853 118.053 99.927 83.116 1.00 65.70 P
ATOM 23 OP1 A A1853 119.259 99.779 83.973 1.00 64.22 O
ATOM 24 OP2 A A1853 118.051 99.379 81.733 1.00 64.95 O
ATOM 25 O5' A A1853 116.762 99.372 83.878 1.00 64.71 O
TER
ATOM 1 O3' G B1896 124.380 108.039 79.139 1.00 58.08 O
ATOM 2 P U B1897 123.925 108.466 80.629 1.00 56.46 P
ATOM 3 OP1 U B1897 124.910 109.445 81.171 1.00 56.08 O
ATOM 4 OP2 U B1897 123.622 107.231 81.394 1.00 56.00 O
ATOM 5 O5' U B1897 122.587 109.291 80.389 1.00 57.93 O
ATOM 6 C5' U B1897 122.610 110.512 79.620 1.00 57.55 C
ATOM 7 C4' U B1897 121.206 110.998 79.354 1.00 55.85 C
ATOM 8 O4' U B1897 120.505 110.058 78.487 1.00 57.37 O
ATOM 9 C3' U B1897 120.296 111.142 80.562 1.00 54.57 C
ATOM 10 O3' U B1897 120.532 112.342 81.302 1.00 50.70 O
ATOM 11 C2' U B1897 118.929 111.131 79.900 1.00 55.10 C
ATOM 12 O2' U B1897 118.741 112.395 79.293 1.00 55.64 O
ATOM 13 C1' U B1897 119.119 110.068 78.805 1.00 57.30 C
ATOM 14 N1 U B1897 118.663 108.679 79.066 1.00 58.69 N
ATOM 15 C2 U B1897 117.322 108.347 78.795 1.00 59.04 C
ATOM 16 O2 U B1897 116.507 109.146 78.368 1.00 60.69 O
ATOM 17 N3 U B1897 116.973 107.037 79.039 1.00 58.52 N
ATOM 18 C4 U B1897 117.783 106.040 79.506 1.00 58.70 C
ATOM 19 O4 U B1897 117.301 104.925 79.705 1.00 58.30 O
ATOM 20 C5 U B1897 119.144 106.442 79.761 1.00 59.04 C
ATOM 21 C6 U B1897 119.524 107.714 79.544 1.00 58.48 C
ATOM 22 P C B1898 120.264 112.353 82.885 1.00 48.92 P
ATOM 23 OP1 C B1898 120.719 113.622 83.529 1.00 50.57 O
ATOM 24 OP2 C B1898 120.750 111.064 83.403 1.00 47.59 O
ATOM 25 O5' C B1898 118.683 112.359 82.987 1.00 50.21 O
TER
Atoms:
C2: (116.321,106.121,82.187)
OP1: (120.480,102.101,87.172)
OP2: (121.127,104.585,87.347)
C4: (117.125,108.260,82.535)
O5': (118.874,103.889,86.430)
C3': (118.464,102.318,84.009)
C1': (117.426,104.199,83.148)
O4': (116.744,103.910,84.347)
C5': (117.716,103.039,86.379)
P: (120.095,103.517,87.383)
O2: (115.499,105.326,81.701)
C4': (117.343,102.742,84.953)
C2': (118.822,103.622,83.318)
O2': (119.425,103.504,82.040)
N1: (117.367,105.628,82.931)
N3: (116.221,107.439,82.004)
N4: (116.964,109.560,82.343)
C6: (118.307,106.467,83.459)
C5: (118.223,107.783,83.287)
O3': (117.851,101.497,83.041)
OP1: (120.480,102.101,87.172)
OP2: (121.127,104.585,87.347)
C4: (117.125,108.260,82.535)
O5': (118.874,103.889,86.430)
C3': (118.464,102.318,84.009)
C1': (117.426,104.199,83.148)
O4': (116.744,103.910,84.347)
C5': (117.716,103.039,86.379)
P: (120.095,103.517,87.383)
O2: (115.499,105.326,81.701)
C4': (117.343,102.742,84.953)
C2': (118.822,103.622,83.318)
O2': (119.425,103.504,82.040)
N1: (117.367,105.628,82.931)
N3: (116.221,107.439,82.004)
N4: (116.964,109.560,82.343)
C6: (118.307,106.467,83.459)
C5: (118.223,107.783,83.287)
O3': (117.851,101.497,83.041)
C4: (117.783,106.040,79.506)
N3: (116.973,107.037,79.039)
OP1: (124.910,109.445,81.171)
OP2: (123.622,107.231,81.394)
C2: (117.322,108.347,78.795)
C1': (119.119,110.068,78.805)
C3': (120.296,111.142,80.562)
O5': (122.587,109.291,80.389)
O4': (120.505,110.058,78.487)
C5': (122.610,110.512,79.620)
P: (123.925,108.466,80.629)
C4': (121.206,110.998,79.354)
C2': (118.929,111.131,79.900)
O2': (118.741,112.395,79.293)
N1: (118.663,108.679,79.066)
O4: (117.301,104.925,79.705)
O2: (116.507,109.146,78.368)
C6: (119.524,107.714,79.544)
C5: (119.144,106.442,79.761)
O3': (120.532,112.342,81.302)
N3: (116.973,107.037,79.039)
OP1: (124.910,109.445,81.171)
OP2: (123.622,107.231,81.394)
C2: (117.322,108.347,78.795)
C1': (119.119,110.068,78.805)
C3': (120.296,111.142,80.562)
O5': (122.587,109.291,80.389)
O4': (120.505,110.058,78.487)
C5': (122.610,110.512,79.620)
P: (123.925,108.466,80.629)
C4': (121.206,110.998,79.354)
C2': (118.929,111.131,79.900)
O2': (118.741,112.395,79.293)
N1: (118.663,108.679,79.066)
O4: (117.301,104.925,79.705)
O2: (116.507,109.146,78.368)
C6: (119.524,107.714,79.544)
C5: (119.144,106.442,79.761)
O3': (120.532,112.342,81.302)
Image (generated by PyMOL):