Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1875:1876
Extra
PDB:
ATOM 1 O3' U A 874 49.766 -10.835 99.686 1.00 33.88 O
ATOM 2 P C A 875 50.111 -11.487 98.306 1.00 32.66 P
ATOM 3 OP1 C A 875 51.407 -12.119 98.436 1.00 32.78 O
ATOM 4 OP2 C A 875 49.915 -10.431 97.289 1.00 32.43 O
ATOM 5 O5' C A 875 49.008 -12.613 98.168 1.00 32.59 O
ATOM 6 C5' C A 875 49.081 -13.763 98.980 1.00 32.78 C
ATOM 7 C4' C A 875 47.956 -14.722 98.707 1.00 32.69 C
ATOM 8 O4' C A 875 46.686 -14.117 99.049 1.00 32.69 O
ATOM 9 C3' C A 875 47.783 -15.159 97.267 1.00 32.40 C
ATOM 10 O3' C A 875 48.689 -16.172 96.921 1.00 32.41 O
ATOM 11 C2' C A 875 46.329 -15.609 97.257 1.00 32.34 C
ATOM 12 O2' C A 875 46.195 -16.844 97.917 1.00 32.52 O
ATOM 13 C1' C A 875 45.695 -14.564 98.148 1.00 32.47 C
ATOM 14 N1 C A 875 45.190 -13.418 97.387 1.00 32.26 N
ATOM 15 C2 C A 875 43.985 -13.634 96.748 1.00 32.10 C
ATOM 16 O2 C A 875 43.456 -14.724 96.842 1.00 32.13 O
ATOM 17 N3 C A 875 43.389 -12.717 96.019 1.00 31.92 N
ATOM 18 C4 C A 875 43.996 -11.582 95.944 1.00 31.91 C
ATOM 19 N4 C A 875 43.309 -10.711 95.230 1.00 31.75 N
ATOM 20 C5 C A 875 45.243 -11.290 96.604 1.00 32.08 C
ATOM 21 C6 C A 875 45.832 -12.230 97.330 1.00 32.26 C
ATOM 22 P U A 876 49.066 -16.453 95.403 1.00 36.31 P
ATOM 23 OP1 U A 876 47.859 -17.037 94.768 1.00 36.15 O
ATOM 24 OP2 U A 876 50.320 -17.244 95.395 1.00 36.42 O
ATOM 25 O5' U A 876 49.348 -15.020 94.818 1.00 36.16 O
TER
ATOM 1 O3' C B 875 48.689 -16.172 96.921 1.00 32.41 O
ATOM 2 P U B 876 49.066 -16.453 95.403 1.00 36.31 P
ATOM 3 OP1 U B 876 47.859 -17.037 94.768 1.00 36.15 O
ATOM 4 OP2 U B 876 50.320 -17.244 95.395 1.00 36.42 O
ATOM 5 O5' U B 876 49.348 -15.020 94.818 1.00 36.16 O
ATOM 6 C5' U B 876 50.338 -14.830 93.819 1.00 36.03 C
ATOM 7 C4' U B 876 50.291 -13.438 93.262 1.00 35.89 C
ATOM 8 O4' U B 876 49.093 -13.298 92.482 1.00 35.68 O
ATOM 9 C3' U B 876 50.243 -12.332 94.309 1.00 36.05 C
ATOM 10 O3' U B 876 50.824 -11.147 93.781 1.00 35.98 O
ATOM 11 C2' U B 876 48.760 -12.123 94.495 1.00 36.01 C
ATOM 12 O2' U B 876 48.405 -10.869 95.009 1.00 36.07 O
ATOM 13 C1' U B 876 48.252 -12.325 93.066 1.00 35.72 C
ATOM 14 N1 U B 876 46.855 -12.810 93.007 1.00 35.66 N
ATOM 15 C2 U B 876 45.933 -11.979 92.459 1.00 35.52 C
ATOM 16 O2 U B 876 46.263 -10.941 91.962 1.00 35.43 O
ATOM 17 N3 U B 876 44.656 -12.406 92.496 1.00 35.48 N
ATOM 18 C4 U B 876 44.210 -13.592 92.997 1.00 35.58 C
ATOM 19 O4 U B 876 43.035 -13.867 92.914 1.00 35.54 O
ATOM 20 C5 U B 876 45.210 -14.422 93.565 1.00 35.73 C
ATOM 21 C6 U B 876 46.492 -14.005 93.580 1.00 35.77 C
ATOM 22 P A B 877 52.405 -11.084 93.467 1.00 35.65 P
ATOM 23 OP1 A B 877 53.012 -12.330 93.981 1.00 35.80 O
ATOM 24 OP2 A B 877 52.896 -9.781 93.956 1.00 35.77 O
ATOM 25 O5' A B 877 52.459 -11.102 91.888 1.00 35.37 O
TER
ATOM 2 P C A 875 50.111 -11.487 98.306 1.00 32.66 P
ATOM 3 OP1 C A 875 51.407 -12.119 98.436 1.00 32.78 O
ATOM 4 OP2 C A 875 49.915 -10.431 97.289 1.00 32.43 O
ATOM 5 O5' C A 875 49.008 -12.613 98.168 1.00 32.59 O
ATOM 6 C5' C A 875 49.081 -13.763 98.980 1.00 32.78 C
ATOM 7 C4' C A 875 47.956 -14.722 98.707 1.00 32.69 C
ATOM 8 O4' C A 875 46.686 -14.117 99.049 1.00 32.69 O
ATOM 9 C3' C A 875 47.783 -15.159 97.267 1.00 32.40 C
ATOM 10 O3' C A 875 48.689 -16.172 96.921 1.00 32.41 O
ATOM 11 C2' C A 875 46.329 -15.609 97.257 1.00 32.34 C
ATOM 12 O2' C A 875 46.195 -16.844 97.917 1.00 32.52 O
ATOM 13 C1' C A 875 45.695 -14.564 98.148 1.00 32.47 C
ATOM 14 N1 C A 875 45.190 -13.418 97.387 1.00 32.26 N
ATOM 15 C2 C A 875 43.985 -13.634 96.748 1.00 32.10 C
ATOM 16 O2 C A 875 43.456 -14.724 96.842 1.00 32.13 O
ATOM 17 N3 C A 875 43.389 -12.717 96.019 1.00 31.92 N
ATOM 18 C4 C A 875 43.996 -11.582 95.944 1.00 31.91 C
ATOM 19 N4 C A 875 43.309 -10.711 95.230 1.00 31.75 N
ATOM 20 C5 C A 875 45.243 -11.290 96.604 1.00 32.08 C
ATOM 21 C6 C A 875 45.832 -12.230 97.330 1.00 32.26 C
ATOM 22 P U A 876 49.066 -16.453 95.403 1.00 36.31 P
ATOM 23 OP1 U A 876 47.859 -17.037 94.768 1.00 36.15 O
ATOM 24 OP2 U A 876 50.320 -17.244 95.395 1.00 36.42 O
ATOM 25 O5' U A 876 49.348 -15.020 94.818 1.00 36.16 O
TER
ATOM 1 O3' C B 875 48.689 -16.172 96.921 1.00 32.41 O
ATOM 2 P U B 876 49.066 -16.453 95.403 1.00 36.31 P
ATOM 3 OP1 U B 876 47.859 -17.037 94.768 1.00 36.15 O
ATOM 4 OP2 U B 876 50.320 -17.244 95.395 1.00 36.42 O
ATOM 5 O5' U B 876 49.348 -15.020 94.818 1.00 36.16 O
ATOM 6 C5' U B 876 50.338 -14.830 93.819 1.00 36.03 C
ATOM 7 C4' U B 876 50.291 -13.438 93.262 1.00 35.89 C
ATOM 8 O4' U B 876 49.093 -13.298 92.482 1.00 35.68 O
ATOM 9 C3' U B 876 50.243 -12.332 94.309 1.00 36.05 C
ATOM 10 O3' U B 876 50.824 -11.147 93.781 1.00 35.98 O
ATOM 11 C2' U B 876 48.760 -12.123 94.495 1.00 36.01 C
ATOM 12 O2' U B 876 48.405 -10.869 95.009 1.00 36.07 O
ATOM 13 C1' U B 876 48.252 -12.325 93.066 1.00 35.72 C
ATOM 14 N1 U B 876 46.855 -12.810 93.007 1.00 35.66 N
ATOM 15 C2 U B 876 45.933 -11.979 92.459 1.00 35.52 C
ATOM 16 O2 U B 876 46.263 -10.941 91.962 1.00 35.43 O
ATOM 17 N3 U B 876 44.656 -12.406 92.496 1.00 35.48 N
ATOM 18 C4 U B 876 44.210 -13.592 92.997 1.00 35.58 C
ATOM 19 O4 U B 876 43.035 -13.867 92.914 1.00 35.54 O
ATOM 20 C5 U B 876 45.210 -14.422 93.565 1.00 35.73 C
ATOM 21 C6 U B 876 46.492 -14.005 93.580 1.00 35.77 C
ATOM 22 P A B 877 52.405 -11.084 93.467 1.00 35.65 P
ATOM 23 OP1 A B 877 53.012 -12.330 93.981 1.00 35.80 O
ATOM 24 OP2 A B 877 52.896 -9.781 93.956 1.00 35.77 O
ATOM 25 O5' A B 877 52.459 -11.102 91.888 1.00 35.37 O
TER
Atoms:
C2: (43.985,-13.634,96.748)
OP1: (51.407,-12.119,98.436)
OP2: (49.915,-10.431,97.289)
C4: (43.996,-11.582,95.944)
O5': (49.008,-12.613,98.168)
C3': (47.783,-15.159,97.267)
C1': (45.695,-14.564,98.148)
O4': (46.686,-14.117,99.049)
C5': (49.081,-13.763,98.980)
P: (50.111,-11.487,98.306)
O2: (43.456,-14.724,96.842)
C4': (47.956,-14.722,98.707)
C2': (46.329,-15.609,97.257)
O2': (46.195,-16.844,97.917)
N1: (45.190,-13.418,97.387)
N3: (43.389,-12.717,96.019)
N4: (43.309,-10.711,95.230)
C6: (45.832,-12.230,97.330)
C5: (45.243,-11.290,96.604)
O3': (48.689,-16.172,96.921)
OP1: (51.407,-12.119,98.436)
OP2: (49.915,-10.431,97.289)
C4: (43.996,-11.582,95.944)
O5': (49.008,-12.613,98.168)
C3': (47.783,-15.159,97.267)
C1': (45.695,-14.564,98.148)
O4': (46.686,-14.117,99.049)
C5': (49.081,-13.763,98.980)
P: (50.111,-11.487,98.306)
O2: (43.456,-14.724,96.842)
C4': (47.956,-14.722,98.707)
C2': (46.329,-15.609,97.257)
O2': (46.195,-16.844,97.917)
N1: (45.190,-13.418,97.387)
N3: (43.389,-12.717,96.019)
N4: (43.309,-10.711,95.230)
C6: (45.832,-12.230,97.330)
C5: (45.243,-11.290,96.604)
O3': (48.689,-16.172,96.921)
C4: (44.210,-13.592,92.997)
N3: (44.656,-12.406,92.496)
OP1: (47.859,-17.037,94.768)
OP2: (50.320,-17.244,95.395)
C2: (45.933,-11.979,92.459)
C1': (48.252,-12.325,93.066)
C3': (50.243,-12.332,94.309)
O5': (49.348,-15.020,94.818)
O4': (49.093,-13.298,92.482)
C5': (50.338,-14.830,93.819)
P: (49.066,-16.453,95.403)
C4': (50.291,-13.438,93.262)
C2': (48.760,-12.123,94.495)
O2': (48.405,-10.869,95.009)
N1: (46.855,-12.810,93.007)
O4: (43.035,-13.867,92.914)
O2: (46.263,-10.941,91.962)
C6: (46.492,-14.005,93.580)
C5: (45.210,-14.422,93.565)
O3': (50.824,-11.147,93.781)
N3: (44.656,-12.406,92.496)
OP1: (47.859,-17.037,94.768)
OP2: (50.320,-17.244,95.395)
C2: (45.933,-11.979,92.459)
C1': (48.252,-12.325,93.066)
C3': (50.243,-12.332,94.309)
O5': (49.348,-15.020,94.818)
O4': (49.093,-13.298,92.482)
C5': (50.338,-14.830,93.819)
P: (49.066,-16.453,95.403)
C4': (50.291,-13.438,93.262)
C2': (48.760,-12.123,94.495)
O2': (48.405,-10.869,95.009)
N1: (46.855,-12.810,93.007)
O4: (43.035,-13.867,92.914)
O2: (46.263,-10.941,91.962)
C6: (46.492,-14.005,93.580)
C5: (45.210,-14.422,93.565)
O3': (50.824,-11.147,93.781)
Image (generated by PyMOL):