Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXB:A4:A3
Extra
PDB:
ATOM 1 O3' U A 3 10.254 -28.034 -3.912 1.00114.60 O
ATOM 2 P C A 4 10.670 -28.723 -2.523 1.00111.12 P
ATOM 3 OP1 C A 4 12.129 -28.973 -2.566 1.00110.78 O
ATOM 4 OP2 C A 4 9.752 -29.848 -2.231 1.00109.50 O
ATOM 5 O5' C A 4 10.377 -27.558 -1.470 1.00109.52 O
ATOM 6 C5' C A 4 10.840 -26.236 -1.722 1.00109.92 C
ATOM 7 C4' C A 4 10.040 -25.213 -0.941 1.00109.10 C
ATOM 8 O4' C A 4 8.713 -25.085 -1.506 1.00110.27 O
ATOM 9 C3' C A 4 9.758 -25.560 0.512 1.00106.20 C
ATOM 10 O3' C A 4 10.882 -25.321 1.336 1.00104.64 O
ATOM 11 C2' C A 4 8.625 -24.591 0.805 1.00107.20 C
ATOM 12 O2' C A 4 9.065 -23.264 1.005 1.00108.50 O
ATOM 13 C1' C A 4 7.810 -24.698 -0.480 1.00109.45 C
ATOM 14 N1 C A 4 6.655 -25.663 -0.319 1.00109.00 N
ATOM 15 C2 C A 4 6.720 -27.028 -0.690 1.00108.80 C
ATOM 16 O2 C A 4 7.742 -27.513 -1.192 1.00109.77 O
ATOM 17 N3 C A 4 5.636 -27.823 -0.495 1.00107.83 N
ATOM 18 C4 C A 4 4.530 -27.318 0.045 1.00107.49 C
ATOM 19 N4 C A 4 3.495 -28.144 0.215 1.00106.92 N
ATOM 20 C5 C A 4 4.445 -25.948 0.435 1.00107.94 C
ATOM 21 C6 C A 4 5.510 -25.168 0.241 1.00108.51 C
ATOM 22 P U A 5 11.173 -26.293 2.571 1.00101.79 P
ATOM 23 OP1 U A 5 12.496 -25.941 3.135 1.00101.19 O
ATOM 24 OP2 U A 5 10.914 -27.683 2.135 1.00101.33 O
ATOM 25 O5' U A 5 10.038 -25.882 3.614 1.00100.64 O
TER
ATOM 1 O3' C B 2 7.709 -32.684 -6.908 1.00122.26 O
ATOM 2 P U B 3 8.338 -32.499 -5.447 1.00118.46 P
ATOM 3 OP1 U B 3 9.742 -32.960 -5.497 1.00117.92 O
ATOM 4 OP2 U B 3 7.420 -33.105 -4.455 1.00116.48 O
ATOM 5 O5' U B 3 8.304 -30.908 -5.263 1.00118.16 O
ATOM 6 C5' U B 3 9.112 -30.077 -6.097 1.00119.30 C
ATOM 7 C4' U B 3 8.886 -28.597 -5.842 1.00119.36 C
ATOM 8 O4' U B 3 7.557 -28.213 -6.278 1.00120.82 O
ATOM 9 C3' U B 3 8.922 -28.162 -4.384 1.00116.61 C
ATOM 10 O3' U B 3 10.254 -28.034 -3.912 1.00114.60 O
ATOM 11 C2' U B 3 8.159 -26.840 -4.445 1.00118.22 C
ATOM 12 O2' U B 3 8.908 -25.755 -4.961 1.00119.98 O
ATOM 13 C1' U B 3 7.037 -27.221 -5.408 1.00120.16 C
ATOM 14 N1 U B 3 5.805 -27.738 -4.707 1.00119.25 N
ATOM 15 C2 U B 3 4.848 -26.833 -4.275 1.00119.67 C
ATOM 16 O2 U B 3 4.936 -25.626 -4.439 1.00121.26 O
ATOM 17 N3 U B 3 3.759 -27.397 -3.643 1.00118.40 N
ATOM 18 C4 U B 3 3.531 -28.744 -3.397 1.00116.90 C
ATOM 19 O4 U B 3 2.507 -29.098 -2.820 1.00115.52 O
ATOM 20 C5 U B 3 4.572 -29.626 -3.868 1.00117.05 C
ATOM 21 C6 U B 3 5.640 -29.101 -4.489 1.00118.10 C
ATOM 22 P C B 4 10.670 -28.723 -2.523 1.00111.12 P
ATOM 23 OP1 C B 4 12.129 -28.973 -2.566 1.00110.78 O
ATOM 24 OP2 C B 4 9.752 -29.848 -2.231 1.00109.50 O
ATOM 25 O5' C B 4 10.377 -27.558 -1.470 1.00109.52 O
TER
ATOM 2 P C A 4 10.670 -28.723 -2.523 1.00111.12 P
ATOM 3 OP1 C A 4 12.129 -28.973 -2.566 1.00110.78 O
ATOM 4 OP2 C A 4 9.752 -29.848 -2.231 1.00109.50 O
ATOM 5 O5' C A 4 10.377 -27.558 -1.470 1.00109.52 O
ATOM 6 C5' C A 4 10.840 -26.236 -1.722 1.00109.92 C
ATOM 7 C4' C A 4 10.040 -25.213 -0.941 1.00109.10 C
ATOM 8 O4' C A 4 8.713 -25.085 -1.506 1.00110.27 O
ATOM 9 C3' C A 4 9.758 -25.560 0.512 1.00106.20 C
ATOM 10 O3' C A 4 10.882 -25.321 1.336 1.00104.64 O
ATOM 11 C2' C A 4 8.625 -24.591 0.805 1.00107.20 C
ATOM 12 O2' C A 4 9.065 -23.264 1.005 1.00108.50 O
ATOM 13 C1' C A 4 7.810 -24.698 -0.480 1.00109.45 C
ATOM 14 N1 C A 4 6.655 -25.663 -0.319 1.00109.00 N
ATOM 15 C2 C A 4 6.720 -27.028 -0.690 1.00108.80 C
ATOM 16 O2 C A 4 7.742 -27.513 -1.192 1.00109.77 O
ATOM 17 N3 C A 4 5.636 -27.823 -0.495 1.00107.83 N
ATOM 18 C4 C A 4 4.530 -27.318 0.045 1.00107.49 C
ATOM 19 N4 C A 4 3.495 -28.144 0.215 1.00106.92 N
ATOM 20 C5 C A 4 4.445 -25.948 0.435 1.00107.94 C
ATOM 21 C6 C A 4 5.510 -25.168 0.241 1.00108.51 C
ATOM 22 P U A 5 11.173 -26.293 2.571 1.00101.79 P
ATOM 23 OP1 U A 5 12.496 -25.941 3.135 1.00101.19 O
ATOM 24 OP2 U A 5 10.914 -27.683 2.135 1.00101.33 O
ATOM 25 O5' U A 5 10.038 -25.882 3.614 1.00100.64 O
TER
ATOM 1 O3' C B 2 7.709 -32.684 -6.908 1.00122.26 O
ATOM 2 P U B 3 8.338 -32.499 -5.447 1.00118.46 P
ATOM 3 OP1 U B 3 9.742 -32.960 -5.497 1.00117.92 O
ATOM 4 OP2 U B 3 7.420 -33.105 -4.455 1.00116.48 O
ATOM 5 O5' U B 3 8.304 -30.908 -5.263 1.00118.16 O
ATOM 6 C5' U B 3 9.112 -30.077 -6.097 1.00119.30 C
ATOM 7 C4' U B 3 8.886 -28.597 -5.842 1.00119.36 C
ATOM 8 O4' U B 3 7.557 -28.213 -6.278 1.00120.82 O
ATOM 9 C3' U B 3 8.922 -28.162 -4.384 1.00116.61 C
ATOM 10 O3' U B 3 10.254 -28.034 -3.912 1.00114.60 O
ATOM 11 C2' U B 3 8.159 -26.840 -4.445 1.00118.22 C
ATOM 12 O2' U B 3 8.908 -25.755 -4.961 1.00119.98 O
ATOM 13 C1' U B 3 7.037 -27.221 -5.408 1.00120.16 C
ATOM 14 N1 U B 3 5.805 -27.738 -4.707 1.00119.25 N
ATOM 15 C2 U B 3 4.848 -26.833 -4.275 1.00119.67 C
ATOM 16 O2 U B 3 4.936 -25.626 -4.439 1.00121.26 O
ATOM 17 N3 U B 3 3.759 -27.397 -3.643 1.00118.40 N
ATOM 18 C4 U B 3 3.531 -28.744 -3.397 1.00116.90 C
ATOM 19 O4 U B 3 2.507 -29.098 -2.820 1.00115.52 O
ATOM 20 C5 U B 3 4.572 -29.626 -3.868 1.00117.05 C
ATOM 21 C6 U B 3 5.640 -29.101 -4.489 1.00118.10 C
ATOM 22 P C B 4 10.670 -28.723 -2.523 1.00111.12 P
ATOM 23 OP1 C B 4 12.129 -28.973 -2.566 1.00110.78 O
ATOM 24 OP2 C B 4 9.752 -29.848 -2.231 1.00109.50 O
ATOM 25 O5' C B 4 10.377 -27.558 -1.470 1.00109.52 O
TER
Atoms:
C2: (6.720,-27.028,-0.690)
OP1: (12.129,-28.973,-2.566)
OP2: (9.752,-29.848,-2.231)
C4: (4.530,-27.318,0.045)
O5': (10.377,-27.558,-1.470)
C3': (9.758,-25.560,0.512)
C1': (7.810,-24.698,-0.480)
O4': (8.713,-25.085,-1.506)
C5': (10.840,-26.236,-1.722)
P: (10.670,-28.723,-2.523)
O2: (7.742,-27.513,-1.192)
C4': (10.040,-25.213,-0.941)
C2': (8.625,-24.591,0.805)
O2': (9.065,-23.264,1.005)
N1: (6.655,-25.663,-0.319)
N3: (5.636,-27.823,-0.495)
N4: (3.495,-28.144,0.215)
C6: (5.510,-25.168,0.241)
C5: (4.445,-25.948,0.435)
O3': (10.882,-25.321,1.336)
OP1: (12.129,-28.973,-2.566)
OP2: (9.752,-29.848,-2.231)
C4: (4.530,-27.318,0.045)
O5': (10.377,-27.558,-1.470)
C3': (9.758,-25.560,0.512)
C1': (7.810,-24.698,-0.480)
O4': (8.713,-25.085,-1.506)
C5': (10.840,-26.236,-1.722)
P: (10.670,-28.723,-2.523)
O2: (7.742,-27.513,-1.192)
C4': (10.040,-25.213,-0.941)
C2': (8.625,-24.591,0.805)
O2': (9.065,-23.264,1.005)
N1: (6.655,-25.663,-0.319)
N3: (5.636,-27.823,-0.495)
N4: (3.495,-28.144,0.215)
C6: (5.510,-25.168,0.241)
C5: (4.445,-25.948,0.435)
O3': (10.882,-25.321,1.336)
C4: (3.531,-28.744,-3.397)
N3: (3.759,-27.397,-3.643)
OP1: (9.742,-32.960,-5.497)
OP2: (7.420,-33.105,-4.455)
C2: (4.848,-26.833,-4.275)
C1': (7.037,-27.221,-5.408)
C3': (8.922,-28.162,-4.384)
O5': (8.304,-30.908,-5.263)
O4': (7.557,-28.213,-6.278)
C5': (9.112,-30.077,-6.097)
P: (8.338,-32.499,-5.447)
C4': (8.886,-28.597,-5.842)
C2': (8.159,-26.840,-4.445)
O2': (8.908,-25.755,-4.961)
N1: (5.805,-27.738,-4.707)
O4: (2.507,-29.098,-2.820)
O2: (4.936,-25.626,-4.439)
C6: (5.640,-29.101,-4.489)
C5: (4.572,-29.626,-3.868)
O3': (10.254,-28.034,-3.912)
N3: (3.759,-27.397,-3.643)
OP1: (9.742,-32.960,-5.497)
OP2: (7.420,-33.105,-4.455)
C2: (4.848,-26.833,-4.275)
C1': (7.037,-27.221,-5.408)
C3': (8.922,-28.162,-4.384)
O5': (8.304,-30.908,-5.263)
O4': (7.557,-28.213,-6.278)
C5': (9.112,-30.077,-6.097)
P: (8.338,-32.499,-5.447)
C4': (8.886,-28.597,-5.842)
C2': (8.159,-26.840,-4.445)
O2': (8.908,-25.755,-4.961)
N1: (5.805,-27.738,-4.707)
O4: (2.507,-29.098,-2.820)
O2: (4.936,-25.626,-4.439)
C6: (5.640,-29.101,-4.489)
C5: (4.572,-29.626,-3.868)
O3': (10.254,-28.034,-3.912)
Image (generated by PyMOL):