Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11477:11476
Extra
PDB:
ATOM 1 O3' C A1476 23.640 13.169 136.884 1.00 53.51 O
ATOM 2 P U A1477 24.127 11.672 136.584 1.00 54.45 P
ATOM 3 OP1 U A1477 23.574 10.803 137.650 1.00 54.81 O
ATOM 4 OP2 U A1477 25.589 11.715 136.390 1.00 54.32 O
ATOM 5 O5' U A1477 23.415 11.345 135.206 1.00 53.82 O
ATOM 6 C5' U A1477 22.091 10.850 135.163 1.00 53.79 C
ATOM 7 C4' U A1477 21.207 11.750 134.343 1.00 53.62 C
ATOM 8 O4' U A1477 21.778 13.069 134.315 1.00 53.79 O
ATOM 9 C3' U A1477 21.046 11.407 132.871 1.00 52.95 C
ATOM 10 O3' U A1477 20.104 10.391 132.638 1.00 52.76 O
ATOM 11 C2' U A1477 20.620 12.731 132.296 1.00 52.95 C
ATOM 12 O2' U A1477 19.272 13.011 132.644 1.00 53.23 O
ATOM 13 C1' U A1477 21.506 13.676 133.079 1.00 53.39 C
ATOM 14 N1 U A1477 22.774 13.925 132.405 1.00 53.08 N
ATOM 15 C2 U A1477 22.788 14.622 131.231 1.00 52.72 C
ATOM 16 O2 U A1477 21.787 15.031 130.708 1.00 52.63 O
ATOM 17 N3 U A1477 24.005 14.839 130.670 1.00 52.47 N
ATOM 18 C4 U A1477 25.189 14.434 131.206 1.00 52.57 C
ATOM 19 O4 U A1477 26.221 14.683 130.621 1.00 52.33 O
ATOM 20 C5 U A1477 25.112 13.719 132.432 1.00 52.96 C
ATOM 21 C6 U A1477 23.921 13.491 132.975 1.00 53.20 C
ATOM 22 P A A1478 20.312 9.374 131.428 1.00 49.74 P
ATOM 23 OP1 A A1478 19.286 8.345 131.559 1.00 49.71 O
ATOM 24 OP2 A A1478 21.731 8.962 131.457 1.00 49.62 O
ATOM 25 O5' A A1478 20.015 10.277 130.142 1.00 49.37 O
TER
ATOM 1 O3' C B1475 29.394 15.170 138.178 1.00 57.62 O
ATOM 2 P C B1476 28.714 13.984 137.304 1.00 53.69 P
ATOM 3 OP1 C B1476 28.593 12.781 138.208 1.00 53.90 O
ATOM 4 OP2 C B1476 29.513 13.853 136.022 1.00 53.08 O
ATOM 5 O5' C B1476 27.260 14.580 136.980 1.00 53.68 O
ATOM 6 C5' C B1476 26.273 14.690 137.996 1.00 54.18 C
ATOM 7 C4' C B1476 24.938 15.140 137.450 1.00 54.06 C
ATOM 8 O4' C B1476 25.055 16.450 136.861 1.00 54.04 O
ATOM 9 C3' C B1476 24.334 14.280 136.357 1.00 53.44 C
ATOM 10 O3' C B1476 23.640 13.169 136.884 1.00 53.51 O
ATOM 11 C2' C B1476 23.428 15.257 135.625 1.00 53.33 C
ATOM 12 O2' C B1476 22.198 15.399 136.297 1.00 53.71 O
ATOM 13 C1' C B1476 24.176 16.562 135.772 1.00 53.61 C
ATOM 14 N1 C B1476 24.941 16.910 134.574 1.00 53.12 N
ATOM 15 C2 C B1476 24.246 17.491 133.517 1.00 52.81 C
ATOM 16 O2 C B1476 23.019 17.625 133.613 1.00 52.93 O
ATOM 17 N3 C B1476 24.912 17.878 132.417 1.00 52.39 N
ATOM 18 C4 C B1476 26.234 17.703 132.396 1.00 52.30 C
ATOM 19 N4 C B1476 26.908 18.089 131.311 1.00 51.90 N
ATOM 20 C5 C B1476 26.956 17.129 133.477 1.00 52.62 C
ATOM 21 C6 C B1476 26.287 16.743 134.548 1.00 53.03 C
ATOM 22 P U B1477 24.127 11.672 136.584 1.00 54.45 P
ATOM 23 OP1 U B1477 23.574 10.803 137.650 1.00 54.81 O
ATOM 24 OP2 U B1477 25.589 11.715 136.390 1.00 54.32 O
ATOM 25 O5' U B1477 23.415 11.345 135.206 1.00 53.82 O
TER
ATOM 2 P U A1477 24.127 11.672 136.584 1.00 54.45 P
ATOM 3 OP1 U A1477 23.574 10.803 137.650 1.00 54.81 O
ATOM 4 OP2 U A1477 25.589 11.715 136.390 1.00 54.32 O
ATOM 5 O5' U A1477 23.415 11.345 135.206 1.00 53.82 O
ATOM 6 C5' U A1477 22.091 10.850 135.163 1.00 53.79 C
ATOM 7 C4' U A1477 21.207 11.750 134.343 1.00 53.62 C
ATOM 8 O4' U A1477 21.778 13.069 134.315 1.00 53.79 O
ATOM 9 C3' U A1477 21.046 11.407 132.871 1.00 52.95 C
ATOM 10 O3' U A1477 20.104 10.391 132.638 1.00 52.76 O
ATOM 11 C2' U A1477 20.620 12.731 132.296 1.00 52.95 C
ATOM 12 O2' U A1477 19.272 13.011 132.644 1.00 53.23 O
ATOM 13 C1' U A1477 21.506 13.676 133.079 1.00 53.39 C
ATOM 14 N1 U A1477 22.774 13.925 132.405 1.00 53.08 N
ATOM 15 C2 U A1477 22.788 14.622 131.231 1.00 52.72 C
ATOM 16 O2 U A1477 21.787 15.031 130.708 1.00 52.63 O
ATOM 17 N3 U A1477 24.005 14.839 130.670 1.00 52.47 N
ATOM 18 C4 U A1477 25.189 14.434 131.206 1.00 52.57 C
ATOM 19 O4 U A1477 26.221 14.683 130.621 1.00 52.33 O
ATOM 20 C5 U A1477 25.112 13.719 132.432 1.00 52.96 C
ATOM 21 C6 U A1477 23.921 13.491 132.975 1.00 53.20 C
ATOM 22 P A A1478 20.312 9.374 131.428 1.00 49.74 P
ATOM 23 OP1 A A1478 19.286 8.345 131.559 1.00 49.71 O
ATOM 24 OP2 A A1478 21.731 8.962 131.457 1.00 49.62 O
ATOM 25 O5' A A1478 20.015 10.277 130.142 1.00 49.37 O
TER
ATOM 1 O3' C B1475 29.394 15.170 138.178 1.00 57.62 O
ATOM 2 P C B1476 28.714 13.984 137.304 1.00 53.69 P
ATOM 3 OP1 C B1476 28.593 12.781 138.208 1.00 53.90 O
ATOM 4 OP2 C B1476 29.513 13.853 136.022 1.00 53.08 O
ATOM 5 O5' C B1476 27.260 14.580 136.980 1.00 53.68 O
ATOM 6 C5' C B1476 26.273 14.690 137.996 1.00 54.18 C
ATOM 7 C4' C B1476 24.938 15.140 137.450 1.00 54.06 C
ATOM 8 O4' C B1476 25.055 16.450 136.861 1.00 54.04 O
ATOM 9 C3' C B1476 24.334 14.280 136.357 1.00 53.44 C
ATOM 10 O3' C B1476 23.640 13.169 136.884 1.00 53.51 O
ATOM 11 C2' C B1476 23.428 15.257 135.625 1.00 53.33 C
ATOM 12 O2' C B1476 22.198 15.399 136.297 1.00 53.71 O
ATOM 13 C1' C B1476 24.176 16.562 135.772 1.00 53.61 C
ATOM 14 N1 C B1476 24.941 16.910 134.574 1.00 53.12 N
ATOM 15 C2 C B1476 24.246 17.491 133.517 1.00 52.81 C
ATOM 16 O2 C B1476 23.019 17.625 133.613 1.00 52.93 O
ATOM 17 N3 C B1476 24.912 17.878 132.417 1.00 52.39 N
ATOM 18 C4 C B1476 26.234 17.703 132.396 1.00 52.30 C
ATOM 19 N4 C B1476 26.908 18.089 131.311 1.00 51.90 N
ATOM 20 C5 C B1476 26.956 17.129 133.477 1.00 52.62 C
ATOM 21 C6 C B1476 26.287 16.743 134.548 1.00 53.03 C
ATOM 22 P U B1477 24.127 11.672 136.584 1.00 54.45 P
ATOM 23 OP1 U B1477 23.574 10.803 137.650 1.00 54.81 O
ATOM 24 OP2 U B1477 25.589 11.715 136.390 1.00 54.32 O
ATOM 25 O5' U B1477 23.415 11.345 135.206 1.00 53.82 O
TER
Atoms:
C4: (25.189,14.434,131.206)
N3: (24.005,14.839,130.670)
OP1: (23.574,10.803,137.650)
OP2: (25.589,11.715,136.390)
C2: (22.788,14.622,131.231)
C1': (21.506,13.676,133.079)
C3': (21.046,11.407,132.871)
O5': (23.415,11.345,135.206)
O4': (21.778,13.069,134.315)
C5': (22.091,10.850,135.163)
P: (24.127,11.672,136.584)
C4': (21.207,11.750,134.343)
C2': (20.620,12.731,132.296)
O2': (19.272,13.011,132.644)
N1: (22.774,13.925,132.405)
O4: (26.221,14.683,130.621)
O2: (21.787,15.031,130.708)
C6: (23.921,13.491,132.975)
C5: (25.112,13.719,132.432)
O3': (20.104,10.391,132.638)
N3: (24.005,14.839,130.670)
OP1: (23.574,10.803,137.650)
OP2: (25.589,11.715,136.390)
C2: (22.788,14.622,131.231)
C1': (21.506,13.676,133.079)
C3': (21.046,11.407,132.871)
O5': (23.415,11.345,135.206)
O4': (21.778,13.069,134.315)
C5': (22.091,10.850,135.163)
P: (24.127,11.672,136.584)
C4': (21.207,11.750,134.343)
C2': (20.620,12.731,132.296)
O2': (19.272,13.011,132.644)
N1: (22.774,13.925,132.405)
O4: (26.221,14.683,130.621)
O2: (21.787,15.031,130.708)
C6: (23.921,13.491,132.975)
C5: (25.112,13.719,132.432)
O3': (20.104,10.391,132.638)
C2: (24.246,17.491,133.517)
OP1: (28.593,12.781,138.208)
OP2: (29.513,13.853,136.022)
C4: (26.234,17.703,132.396)
O5': (27.260,14.580,136.980)
C3': (24.334,14.280,136.357)
C1': (24.176,16.562,135.772)
O4': (25.055,16.450,136.861)
C5': (26.273,14.690,137.996)
P: (28.714,13.984,137.304)
O2: (23.019,17.625,133.613)
C4': (24.938,15.140,137.450)
C2': (23.428,15.257,135.625)
O2': (22.198,15.399,136.297)
N1: (24.941,16.910,134.574)
N3: (24.912,17.878,132.417)
N4: (26.908,18.089,131.311)
C6: (26.287,16.743,134.548)
C5: (26.956,17.129,133.477)
O3': (23.640,13.169,136.884)
OP1: (28.593,12.781,138.208)
OP2: (29.513,13.853,136.022)
C4: (26.234,17.703,132.396)
O5': (27.260,14.580,136.980)
C3': (24.334,14.280,136.357)
C1': (24.176,16.562,135.772)
O4': (25.055,16.450,136.861)
C5': (26.273,14.690,137.996)
P: (28.714,13.984,137.304)
O2: (23.019,17.625,133.613)
C4': (24.938,15.140,137.450)
C2': (23.428,15.257,135.625)
O2': (22.198,15.399,136.297)
N1: (24.941,16.910,134.574)
N3: (24.912,17.878,132.417)
N4: (26.908,18.089,131.311)
C6: (26.287,16.743,134.548)
C5: (26.956,17.129,133.477)
O3': (23.640,13.169,136.884)
Image (generated by PyMOL):