Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11840:11839
Extra
PDB:
ATOM 1 O3' A A1839 8.377 49.725 64.298 1.00 46.68 O
ATOM 2 P A A1840 6.843 49.272 64.525 1.00 49.83 P
ATOM 3 OP1 A A1840 6.420 49.723 65.845 1.00 50.07 O
ATOM 4 OP2 A A1840 6.772 47.857 64.224 1.00 49.32 O
ATOM 5 O5' A A1840 6.068 50.088 63.433 1.00 50.30 O
ATOM 6 C5' A A1840 6.176 51.497 63.356 1.00 50.83 C
ATOM 7 C4' A A1840 6.100 51.913 61.935 1.00 51.04 C
ATOM 8 O4' A A1840 7.353 51.582 61.294 1.00 50.69 O
ATOM 9 C3' A A1840 5.041 51.176 61.140 1.00 50.98 C
ATOM 10 O3' A A1840 3.794 51.851 61.167 1.00 51.49 O
ATOM 11 C2' A A1840 5.645 51.053 59.751 1.00 50.87 C
ATOM 12 O2' A A1840 5.421 52.232 59.022 1.00 51.41 O
ATOM 13 C1' A A1840 7.132 50.996 60.051 1.00 50.55 C
ATOM 14 N9 A A1840 7.705 49.634 60.067 1.00 49.93 N
ATOM 15 C8 A A1840 8.417 49.115 61.117 1.00 49.56 C
ATOM 16 N7 A A1840 8.904 47.921 60.870 1.00 49.04 N
ATOM 17 C5 A A1840 8.529 47.648 59.563 1.00 49.06 C
ATOM 18 C6 A A1840 8.763 46.534 58.729 1.00 48.66 C
ATOM 19 N6 A A1840 9.479 45.441 59.081 1.00 48.13 N
ATOM 20 N1 A A1840 8.211 46.585 57.502 1.00 48.84 N
ATOM 21 C2 A A1840 7.514 47.667 57.146 1.00 49.38 C
ATOM 22 N3 A A1840 7.258 48.769 57.818 1.00 49.79 N
ATOM 23 C4 A A1840 7.794 48.698 59.043 1.00 49.60 C
ATOM 24 P G A1841 2.497 51.172 61.837 1.00 52.49 P
ATOM 25 OP1 G A1841 1.442 52.202 61.845 1.00 53.12 O
ATOM 26 OP2 G A1841 2.906 50.558 63.109 1.00 52.13 O
ATOM 27 O5' G A1841 2.124 50.062 60.787 1.00 52.18 O
TER
ATOM 1 O3' U B1838 10.695 49.740 70.861 1.00 54.02 O
ATOM 2 P A B1839 9.466 49.195 69.954 1.00 46.32 P
ATOM 3 OP1 A B1839 8.196 49.617 70.634 1.00 46.72 O
ATOM 4 OP2 A B1839 9.676 47.749 69.707 1.00 45.74 O
ATOM 5 O5' A B1839 9.683 50.041 68.604 1.00 46.58 O
ATOM 6 C5' A B1839 9.005 49.728 67.420 1.00 46.56 C
ATOM 7 C4' A B1839 9.866 49.911 66.203 1.00 46.48 C
ATOM 8 O4' A B1839 11.215 49.438 66.466 1.00 46.08 O
ATOM 9 C3' A B1839 9.399 49.096 65.037 1.00 46.26 C
ATOM 10 O3' A B1839 8.377 49.725 64.298 1.00 46.68 O
ATOM 11 C2' A B1839 10.665 48.724 64.257 1.00 45.91 C
ATOM 12 O2' A B1839 10.940 49.606 63.197 1.00 46.21 O
ATOM 13 C1' A B1839 11.761 48.822 65.317 1.00 45.76 C
ATOM 14 N9 A B1839 12.257 47.480 65.676 1.00 45.18 N
ATOM 15 C8 A B1839 12.058 46.790 66.819 1.00 44.97 C
ATOM 16 N7 A B1839 12.596 45.588 66.788 1.00 44.46 N
ATOM 17 C5 A B1839 13.202 45.480 65.546 1.00 44.32 C
ATOM 18 C6 A B1839 13.920 44.457 64.906 1.00 43.86 C
ATOM 19 N6 A B1839 14.209 43.285 65.435 1.00 43.42 N
ATOM 20 N1 A B1839 14.331 44.652 63.656 1.00 43.88 N
ATOM 21 C2 A B1839 14.053 45.824 63.104 1.00 44.34 C
ATOM 22 N3 A B1839 13.407 46.850 63.618 1.00 44.79 N
ATOM 23 C4 A B1839 12.982 46.626 64.852 1.00 44.77 C
ATOM 24 P A B1840 6.843 49.272 64.525 1.00 49.83 P
ATOM 25 OP1 A B1840 6.420 49.723 65.845 1.00 50.07 O
ATOM 26 OP2 A B1840 6.772 47.857 64.224 1.00 49.32 O
ATOM 27 O5' A B1840 6.068 50.088 63.433 1.00 50.30 O
TER
ATOM 2 P A A1840 6.843 49.272 64.525 1.00 49.83 P
ATOM 3 OP1 A A1840 6.420 49.723 65.845 1.00 50.07 O
ATOM 4 OP2 A A1840 6.772 47.857 64.224 1.00 49.32 O
ATOM 5 O5' A A1840 6.068 50.088 63.433 1.00 50.30 O
ATOM 6 C5' A A1840 6.176 51.497 63.356 1.00 50.83 C
ATOM 7 C4' A A1840 6.100 51.913 61.935 1.00 51.04 C
ATOM 8 O4' A A1840 7.353 51.582 61.294 1.00 50.69 O
ATOM 9 C3' A A1840 5.041 51.176 61.140 1.00 50.98 C
ATOM 10 O3' A A1840 3.794 51.851 61.167 1.00 51.49 O
ATOM 11 C2' A A1840 5.645 51.053 59.751 1.00 50.87 C
ATOM 12 O2' A A1840 5.421 52.232 59.022 1.00 51.41 O
ATOM 13 C1' A A1840 7.132 50.996 60.051 1.00 50.55 C
ATOM 14 N9 A A1840 7.705 49.634 60.067 1.00 49.93 N
ATOM 15 C8 A A1840 8.417 49.115 61.117 1.00 49.56 C
ATOM 16 N7 A A1840 8.904 47.921 60.870 1.00 49.04 N
ATOM 17 C5 A A1840 8.529 47.648 59.563 1.00 49.06 C
ATOM 18 C6 A A1840 8.763 46.534 58.729 1.00 48.66 C
ATOM 19 N6 A A1840 9.479 45.441 59.081 1.00 48.13 N
ATOM 20 N1 A A1840 8.211 46.585 57.502 1.00 48.84 N
ATOM 21 C2 A A1840 7.514 47.667 57.146 1.00 49.38 C
ATOM 22 N3 A A1840 7.258 48.769 57.818 1.00 49.79 N
ATOM 23 C4 A A1840 7.794 48.698 59.043 1.00 49.60 C
ATOM 24 P G A1841 2.497 51.172 61.837 1.00 52.49 P
ATOM 25 OP1 G A1841 1.442 52.202 61.845 1.00 53.12 O
ATOM 26 OP2 G A1841 2.906 50.558 63.109 1.00 52.13 O
ATOM 27 O5' G A1841 2.124 50.062 60.787 1.00 52.18 O
TER
ATOM 1 O3' U B1838 10.695 49.740 70.861 1.00 54.02 O
ATOM 2 P A B1839 9.466 49.195 69.954 1.00 46.32 P
ATOM 3 OP1 A B1839 8.196 49.617 70.634 1.00 46.72 O
ATOM 4 OP2 A B1839 9.676 47.749 69.707 1.00 45.74 O
ATOM 5 O5' A B1839 9.683 50.041 68.604 1.00 46.58 O
ATOM 6 C5' A B1839 9.005 49.728 67.420 1.00 46.56 C
ATOM 7 C4' A B1839 9.866 49.911 66.203 1.00 46.48 C
ATOM 8 O4' A B1839 11.215 49.438 66.466 1.00 46.08 O
ATOM 9 C3' A B1839 9.399 49.096 65.037 1.00 46.26 C
ATOM 10 O3' A B1839 8.377 49.725 64.298 1.00 46.68 O
ATOM 11 C2' A B1839 10.665 48.724 64.257 1.00 45.91 C
ATOM 12 O2' A B1839 10.940 49.606 63.197 1.00 46.21 O
ATOM 13 C1' A B1839 11.761 48.822 65.317 1.00 45.76 C
ATOM 14 N9 A B1839 12.257 47.480 65.676 1.00 45.18 N
ATOM 15 C8 A B1839 12.058 46.790 66.819 1.00 44.97 C
ATOM 16 N7 A B1839 12.596 45.588 66.788 1.00 44.46 N
ATOM 17 C5 A B1839 13.202 45.480 65.546 1.00 44.32 C
ATOM 18 C6 A B1839 13.920 44.457 64.906 1.00 43.86 C
ATOM 19 N6 A B1839 14.209 43.285 65.435 1.00 43.42 N
ATOM 20 N1 A B1839 14.331 44.652 63.656 1.00 43.88 N
ATOM 21 C2 A B1839 14.053 45.824 63.104 1.00 44.34 C
ATOM 22 N3 A B1839 13.407 46.850 63.618 1.00 44.79 N
ATOM 23 C4 A B1839 12.982 46.626 64.852 1.00 44.77 C
ATOM 24 P A B1840 6.843 49.272 64.525 1.00 49.83 P
ATOM 25 OP1 A B1840 6.420 49.723 65.845 1.00 50.07 O
ATOM 26 OP2 A B1840 6.772 47.857 64.224 1.00 49.32 O
ATOM 27 O5' A B1840 6.068 50.088 63.433 1.00 50.30 O
TER
Atoms:
OP1: (6.420,49.723,65.845)
OP2: (6.772,47.857,64.224)
C3': (5.041,51.176,61.140)
C1': (7.132,50.996,60.051)
C5': (6.176,51.497,63.356)
O4': (7.353,51.582,61.294)
C8: (8.417,49.115,61.117)
O2': (5.421,52.232,59.022)
C6: (8.763,46.534,58.729)
C5: (8.529,47.648,59.563)
C4: (7.794,48.698,59.043)
P: (6.843,49.272,64.525)
C4': (6.100,51.913,61.935)
C2': (5.645,51.053,59.751)
C2: (7.514,47.667,57.146)
N1: (8.211,46.585,57.502)
N3: (7.258,48.769,57.818)
N6: (9.479,45.441,59.081)
N7: (8.904,47.921,60.870)
N9: (7.705,49.634,60.067)
O5': (6.068,50.088,63.433)
O3': (3.794,51.851,61.167)
OP2: (6.772,47.857,64.224)
C3': (5.041,51.176,61.140)
C1': (7.132,50.996,60.051)
C5': (6.176,51.497,63.356)
O4': (7.353,51.582,61.294)
C8: (8.417,49.115,61.117)
O2': (5.421,52.232,59.022)
C6: (8.763,46.534,58.729)
C5: (8.529,47.648,59.563)
C4: (7.794,48.698,59.043)
P: (6.843,49.272,64.525)
C4': (6.100,51.913,61.935)
C2': (5.645,51.053,59.751)
C2: (7.514,47.667,57.146)
N1: (8.211,46.585,57.502)
N3: (7.258,48.769,57.818)
N6: (9.479,45.441,59.081)
N7: (8.904,47.921,60.870)
N9: (7.705,49.634,60.067)
O5': (6.068,50.088,63.433)
O3': (3.794,51.851,61.167)
OP1: (8.196,49.617,70.634)
OP2: (9.676,47.749,69.707)
C3': (9.399,49.096,65.037)
C1': (11.761,48.822,65.317)
C5': (9.005,49.728,67.420)
O4': (11.215,49.438,66.466)
C8: (12.058,46.790,66.819)
O2': (10.940,49.606,63.197)
C6: (13.920,44.457,64.906)
C5: (13.202,45.480,65.546)
C4: (12.982,46.626,64.852)
P: (9.466,49.195,69.954)
C4': (9.866,49.911,66.203)
C2': (10.665,48.724,64.257)
C2: (14.053,45.824,63.104)
N1: (14.331,44.652,63.656)
N3: (13.407,46.850,63.618)
N6: (14.209,43.285,65.435)
N7: (12.596,45.588,66.788)
N9: (12.257,47.480,65.676)
O5': (9.683,50.041,68.604)
O3': (8.377,49.725,64.298)
OP2: (9.676,47.749,69.707)
C3': (9.399,49.096,65.037)
C1': (11.761,48.822,65.317)
C5': (9.005,49.728,67.420)
O4': (11.215,49.438,66.466)
C8: (12.058,46.790,66.819)
O2': (10.940,49.606,63.197)
C6: (13.920,44.457,64.906)
C5: (13.202,45.480,65.546)
C4: (12.982,46.626,64.852)
P: (9.466,49.195,69.954)
C4': (9.866,49.911,66.203)
C2': (10.665,48.724,64.257)
C2: (14.053,45.824,63.104)
N1: (14.331,44.652,63.656)
N3: (13.407,46.850,63.618)
N6: (14.209,43.285,65.435)
N7: (12.596,45.588,66.788)
N9: (12.257,47.480,65.676)
O5': (9.683,50.041,68.604)
O3': (8.377,49.725,64.298)
Image (generated by PyMOL):