Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0430:0429
Extra
PDB:
ATOM 1 O3' A A 429 53.934 128.084 37.105 1.00 49.93 O
ATOM 2 P A A 430 53.262 129.170 38.071 1.00 49.70 P
ATOM 3 OP1 A A 430 53.922 129.040 39.398 1.00 51.01 O
ATOM 4 OP2 A A 430 51.791 129.023 37.973 1.00 50.09 O
ATOM 5 O5' A A 430 53.688 130.557 37.413 1.00 48.06 O
ATOM 6 C5' A A 430 54.844 131.289 37.881 1.00 47.07 C
ATOM 7 C4' A A 430 55.480 132.034 36.736 1.00 46.31 C
ATOM 8 O4' A A 430 56.197 131.105 35.884 1.00 45.98 O
ATOM 9 C3' A A 430 54.479 132.706 35.817 1.00 46.39 C
ATOM 10 O3' A A 430 54.091 133.974 36.319 1.00 47.39 O
ATOM 11 C2' A A 430 55.233 132.787 34.500 1.00 46.61 C
ATOM 12 O2' A A 430 56.121 133.885 34.465 1.00 48.36 O
ATOM 13 C1' A A 430 56.026 131.475 34.524 1.00 46.02 C
ATOM 14 N9 A A 430 55.373 130.360 33.830 1.00 46.77 N
ATOM 15 C8 A A 430 54.853 129.219 34.392 1.00 46.96 C
ATOM 16 N7 A A 430 54.340 128.387 33.522 1.00 45.68 N
ATOM 17 C5 A A 430 54.530 129.019 32.305 1.00 45.84 C
ATOM 18 C6 A A 430 54.194 128.655 30.995 1.00 47.17 C
ATOM 19 N6 A A 430 53.563 127.525 30.678 1.00 48.08 N
ATOM 20 N1 A A 430 54.525 129.507 30.005 1.00 48.02 N
ATOM 21 C2 A A 430 55.140 130.650 30.324 1.00 46.56 C
ATOM 22 N3 A A 430 55.498 131.108 31.517 1.00 46.39 N
ATOM 23 C4 A A 430 55.163 130.235 32.478 1.00 46.10 C
ATOM 24 P C A 431 52.531 134.356 36.385 1.00 50.34 P
ATOM 25 OP1 C A 431 52.426 135.751 36.872 1.00 50.59 O
ATOM 26 OP2 C A 431 51.797 133.280 37.096 1.00 51.18 O
ATOM 27 O5' C A 431 52.086 134.318 34.857 1.00 50.85 O
TER
ATOM 1 O3' C B 428 56.188 121.909 38.055 1.00 45.59 O
ATOM 2 P A B 429 54.788 122.430 38.651 1.00 46.06 P
ATOM 3 OP1 A B 429 55.011 122.677 40.102 1.00 46.87 O
ATOM 4 OP2 A B 429 53.709 121.503 38.217 1.00 45.89 O
ATOM 5 O5' A B 429 54.561 123.850 37.973 1.00 45.29 O
ATOM 6 C5' A B 429 55.529 124.900 38.130 1.00 46.74 C
ATOM 7 C4' A B 429 55.204 126.045 37.207 1.00 47.98 C
ATOM 8 O4' A B 429 55.179 125.547 35.841 1.00 48.68 O
ATOM 9 C3' A B 429 53.851 126.707 37.437 1.00 49.08 C
ATOM 10 O3' A B 429 53.934 128.084 37.105 1.00 49.93 O
ATOM 11 C2' A B 429 52.938 125.961 36.470 1.00 48.35 C
ATOM 12 O2' A B 429 51.834 126.723 36.034 1.00 47.18 O
ATOM 13 C1' A B 429 53.876 125.673 35.302 1.00 48.75 C
ATOM 14 N9 A B 429 53.529 124.405 34.667 1.00 51.72 N
ATOM 15 C8 A B 429 53.477 123.158 35.252 1.00 52.17 C
ATOM 16 N7 A B 429 53.079 122.210 34.441 1.00 53.08 N
ATOM 17 C5 A B 429 52.864 122.871 33.238 1.00 53.69 C
ATOM 18 C6 A B 429 52.419 122.427 31.986 1.00 53.24 C
ATOM 19 N6 A B 429 52.079 121.164 31.731 1.00 52.59 N
ATOM 20 N1 A B 429 52.327 123.337 30.993 1.00 53.84 N
ATOM 21 C2 A B 429 52.659 124.607 31.253 1.00 53.66 C
ATOM 22 N3 A B 429 53.079 125.150 32.391 1.00 53.38 N
ATOM 23 C4 A B 429 53.158 124.219 33.358 1.00 53.25 C
ATOM 24 P A B 430 53.262 129.170 38.071 1.00 49.70 P
ATOM 25 OP1 A B 430 53.922 129.040 39.398 1.00 51.01 O
ATOM 26 OP2 A B 430 51.791 129.023 37.973 1.00 50.09 O
ATOM 27 O5' A B 430 53.688 130.557 37.413 1.00 48.06 O
TER
ATOM 2 P A A 430 53.262 129.170 38.071 1.00 49.70 P
ATOM 3 OP1 A A 430 53.922 129.040 39.398 1.00 51.01 O
ATOM 4 OP2 A A 430 51.791 129.023 37.973 1.00 50.09 O
ATOM 5 O5' A A 430 53.688 130.557 37.413 1.00 48.06 O
ATOM 6 C5' A A 430 54.844 131.289 37.881 1.00 47.07 C
ATOM 7 C4' A A 430 55.480 132.034 36.736 1.00 46.31 C
ATOM 8 O4' A A 430 56.197 131.105 35.884 1.00 45.98 O
ATOM 9 C3' A A 430 54.479 132.706 35.817 1.00 46.39 C
ATOM 10 O3' A A 430 54.091 133.974 36.319 1.00 47.39 O
ATOM 11 C2' A A 430 55.233 132.787 34.500 1.00 46.61 C
ATOM 12 O2' A A 430 56.121 133.885 34.465 1.00 48.36 O
ATOM 13 C1' A A 430 56.026 131.475 34.524 1.00 46.02 C
ATOM 14 N9 A A 430 55.373 130.360 33.830 1.00 46.77 N
ATOM 15 C8 A A 430 54.853 129.219 34.392 1.00 46.96 C
ATOM 16 N7 A A 430 54.340 128.387 33.522 1.00 45.68 N
ATOM 17 C5 A A 430 54.530 129.019 32.305 1.00 45.84 C
ATOM 18 C6 A A 430 54.194 128.655 30.995 1.00 47.17 C
ATOM 19 N6 A A 430 53.563 127.525 30.678 1.00 48.08 N
ATOM 20 N1 A A 430 54.525 129.507 30.005 1.00 48.02 N
ATOM 21 C2 A A 430 55.140 130.650 30.324 1.00 46.56 C
ATOM 22 N3 A A 430 55.498 131.108 31.517 1.00 46.39 N
ATOM 23 C4 A A 430 55.163 130.235 32.478 1.00 46.10 C
ATOM 24 P C A 431 52.531 134.356 36.385 1.00 50.34 P
ATOM 25 OP1 C A 431 52.426 135.751 36.872 1.00 50.59 O
ATOM 26 OP2 C A 431 51.797 133.280 37.096 1.00 51.18 O
ATOM 27 O5' C A 431 52.086 134.318 34.857 1.00 50.85 O
TER
ATOM 1 O3' C B 428 56.188 121.909 38.055 1.00 45.59 O
ATOM 2 P A B 429 54.788 122.430 38.651 1.00 46.06 P
ATOM 3 OP1 A B 429 55.011 122.677 40.102 1.00 46.87 O
ATOM 4 OP2 A B 429 53.709 121.503 38.217 1.00 45.89 O
ATOM 5 O5' A B 429 54.561 123.850 37.973 1.00 45.29 O
ATOM 6 C5' A B 429 55.529 124.900 38.130 1.00 46.74 C
ATOM 7 C4' A B 429 55.204 126.045 37.207 1.00 47.98 C
ATOM 8 O4' A B 429 55.179 125.547 35.841 1.00 48.68 O
ATOM 9 C3' A B 429 53.851 126.707 37.437 1.00 49.08 C
ATOM 10 O3' A B 429 53.934 128.084 37.105 1.00 49.93 O
ATOM 11 C2' A B 429 52.938 125.961 36.470 1.00 48.35 C
ATOM 12 O2' A B 429 51.834 126.723 36.034 1.00 47.18 O
ATOM 13 C1' A B 429 53.876 125.673 35.302 1.00 48.75 C
ATOM 14 N9 A B 429 53.529 124.405 34.667 1.00 51.72 N
ATOM 15 C8 A B 429 53.477 123.158 35.252 1.00 52.17 C
ATOM 16 N7 A B 429 53.079 122.210 34.441 1.00 53.08 N
ATOM 17 C5 A B 429 52.864 122.871 33.238 1.00 53.69 C
ATOM 18 C6 A B 429 52.419 122.427 31.986 1.00 53.24 C
ATOM 19 N6 A B 429 52.079 121.164 31.731 1.00 52.59 N
ATOM 20 N1 A B 429 52.327 123.337 30.993 1.00 53.84 N
ATOM 21 C2 A B 429 52.659 124.607 31.253 1.00 53.66 C
ATOM 22 N3 A B 429 53.079 125.150 32.391 1.00 53.38 N
ATOM 23 C4 A B 429 53.158 124.219 33.358 1.00 53.25 C
ATOM 24 P A B 430 53.262 129.170 38.071 1.00 49.70 P
ATOM 25 OP1 A B 430 53.922 129.040 39.398 1.00 51.01 O
ATOM 26 OP2 A B 430 51.791 129.023 37.973 1.00 50.09 O
ATOM 27 O5' A B 430 53.688 130.557 37.413 1.00 48.06 O
TER
Atoms:
OP1: (53.922,129.040,39.398)
OP2: (51.791,129.023,37.973)
C3': (54.479,132.706,35.817)
C1': (56.026,131.475,34.524)
C5': (54.844,131.289,37.881)
O4': (56.197,131.105,35.884)
C8: (54.853,129.219,34.392)
O2': (56.121,133.885,34.465)
C6: (54.194,128.655,30.995)
C5: (54.530,129.019,32.305)
C4: (55.163,130.235,32.478)
P: (53.262,129.170,38.071)
C4': (55.480,132.034,36.736)
C2': (55.233,132.787,34.500)
C2: (55.140,130.650,30.324)
N1: (54.525,129.507,30.005)
N3: (55.498,131.108,31.517)
N6: (53.563,127.525,30.678)
N7: (54.340,128.387,33.522)
N9: (55.373,130.360,33.830)
O5': (53.688,130.557,37.413)
O3': (54.091,133.974,36.319)
OP2: (51.791,129.023,37.973)
C3': (54.479,132.706,35.817)
C1': (56.026,131.475,34.524)
C5': (54.844,131.289,37.881)
O4': (56.197,131.105,35.884)
C8: (54.853,129.219,34.392)
O2': (56.121,133.885,34.465)
C6: (54.194,128.655,30.995)
C5: (54.530,129.019,32.305)
C4: (55.163,130.235,32.478)
P: (53.262,129.170,38.071)
C4': (55.480,132.034,36.736)
C2': (55.233,132.787,34.500)
C2: (55.140,130.650,30.324)
N1: (54.525,129.507,30.005)
N3: (55.498,131.108,31.517)
N6: (53.563,127.525,30.678)
N7: (54.340,128.387,33.522)
N9: (55.373,130.360,33.830)
O5': (53.688,130.557,37.413)
O3': (54.091,133.974,36.319)
OP1: (55.011,122.677,40.102)
OP2: (53.709,121.503,38.217)
C3': (53.851,126.707,37.437)
C1': (53.876,125.673,35.302)
C5': (55.529,124.900,38.130)
O4': (55.179,125.547,35.841)
C8: (53.477,123.158,35.252)
O2': (51.834,126.723,36.034)
C6: (52.419,122.427,31.986)
C5: (52.864,122.871,33.238)
C4: (53.158,124.219,33.358)
P: (54.788,122.430,38.651)
C4': (55.204,126.045,37.207)
C2': (52.938,125.961,36.470)
C2: (52.659,124.607,31.253)
N1: (52.327,123.337,30.993)
N3: (53.079,125.150,32.391)
N6: (52.079,121.164,31.731)
N7: (53.079,122.210,34.441)
N9: (53.529,124.405,34.667)
O5': (54.561,123.850,37.973)
O3': (53.934,128.084,37.105)
OP2: (53.709,121.503,38.217)
C3': (53.851,126.707,37.437)
C1': (53.876,125.673,35.302)
C5': (55.529,124.900,38.130)
O4': (55.179,125.547,35.841)
C8: (53.477,123.158,35.252)
O2': (51.834,126.723,36.034)
C6: (52.419,122.427,31.986)
C5: (52.864,122.871,33.238)
C4: (53.158,124.219,33.358)
P: (54.788,122.430,38.651)
C4': (55.204,126.045,37.207)
C2': (52.938,125.961,36.470)
C2: (52.659,124.607,31.253)
N1: (52.327,123.337,30.993)
N3: (53.079,125.150,32.391)
N6: (52.079,121.164,31.731)
N7: (53.079,122.210,34.441)
N9: (53.529,124.405,34.667)
O5': (54.561,123.850,37.973)
O3': (53.934,128.084,37.105)
Image (generated by PyMOL):