Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CMA:01239:01237
Extra
PDB:
ATOM 1 O3' U A1238 12.060 93.937 65.259 1.00101.45 O
ATOM 2 P A A1239 10.455 94.049 65.165 1.00100.90 P
ATOM 3 OP1 A A1239 10.024 95.004 66.220 1.00101.64 O
ATOM 4 OP2 A A1239 9.880 92.676 65.143 1.00101.67 O
ATOM 5 O5' A A1239 10.177 94.727 63.750 1.00 97.84 O
ATOM 6 C5' A A1239 10.051 96.157 63.620 1.00 94.30 C
ATOM 7 C4' A A1239 8.595 96.545 63.465 1.00 91.91 C
ATOM 8 O4' A A1239 8.003 95.736 62.411 1.00 92.03 O
ATOM 9 C3' A A1239 7.699 96.285 64.666 1.00 90.30 C
ATOM 10 O3' A A1239 7.773 97.334 65.623 1.00 89.49 O
ATOM 11 C2' A A1239 6.320 96.185 64.026 1.00 89.90 C
ATOM 12 O2' A A1239 5.750 97.439 63.708 1.00 88.23 O
ATOM 13 C1' A A1239 6.651 95.432 62.737 1.00 89.68 C
ATOM 14 N9 A A1239 6.528 93.980 62.897 1.00 87.40 N
ATOM 15 C8 A A1239 7.531 93.049 63.024 1.00 86.32 C
ATOM 16 N7 A A1239 7.099 91.821 63.162 1.00 85.54 N
ATOM 17 C5 A A1239 5.718 91.947 63.120 1.00 85.12 C
ATOM 18 C6 A A1239 4.680 91.005 63.209 1.00 84.53 C
ATOM 19 N6 A A1239 4.877 89.694 63.365 1.00 83.04 N
ATOM 20 N1 A A1239 3.411 91.462 63.131 1.00 85.22 N
ATOM 21 C2 A A1239 3.212 92.778 62.977 1.00 85.53 C
ATOM 22 N3 A A1239 4.104 93.760 62.880 1.00 85.17 N
ATOM 23 C4 A A1239 5.353 93.272 62.958 1.00 85.84 C
ATOM 24 P C A1240 7.128 97.129 67.082 1.00 88.66 P
ATOM 25 OP1 C A1240 7.115 98.453 67.762 1.00 88.58 O
ATOM 26 OP2 C A1240 7.775 95.965 67.746 1.00 88.34 O
ATOM 27 O5' C A1240 5.616 96.740 66.784 1.00 85.86 O
TER
ATOM 1 O3' C B1236 10.006 86.264 58.181 1.00 53.41 O
ATOM 2 P A B1237 9.965 86.079 59.768 1.00 54.57 P
ATOM 3 OP1 A B1237 11.133 85.258 60.145 1.00 54.36 O
ATOM 4 OP2 A B1237 8.605 85.642 60.156 1.00 56.07 O
ATOM 5 O5' A B1237 10.173 87.553 60.324 1.00 57.68 O
ATOM 6 C5' A B1237 11.440 88.215 60.199 1.00 63.14 C
ATOM 7 C4' A B1237 11.300 89.673 60.550 1.00 66.86 C
ATOM 8 O4' A B1237 10.399 90.303 59.609 1.00 66.66 O
ATOM 9 C3' A B1237 10.690 89.959 61.911 1.00 69.48 C
ATOM 10 O3' A B1237 11.690 89.921 62.920 1.00 76.21 O
ATOM 11 C2' A B1237 10.129 91.361 61.726 1.00 67.46 C
ATOM 12 O2' A B1237 11.121 92.354 61.850 1.00 68.11 O
ATOM 13 C1' A B1237 9.654 91.307 60.271 1.00 66.82 C
ATOM 14 N9 A B1237 8.237 90.994 60.118 1.00 65.86 N
ATOM 15 C8 A B1237 7.626 89.766 60.158 1.00 65.78 C
ATOM 16 N7 A B1237 6.327 89.819 60.003 1.00 65.57 N
ATOM 17 C5 A B1237 6.065 91.172 59.847 1.00 65.41 C
ATOM 18 C6 A B1237 4.874 91.887 59.655 1.00 65.92 C
ATOM 19 N6 A B1237 3.667 91.319 59.589 1.00 65.57 N
ATOM 20 N1 A B1237 4.963 93.228 59.533 1.00 66.96 N
ATOM 21 C2 A B1237 6.173 93.801 59.609 1.00 66.64 C
ATOM 22 N3 A B1237 7.360 93.237 59.794 1.00 65.53 N
ATOM 23 C4 A B1237 7.235 91.905 59.908 1.00 65.49 C
ATOM 24 P U B1238 11.436 89.096 64.276 1.00 81.68 P
ATOM 25 OP1 U B1238 11.689 87.662 63.978 1.00 80.79 O
ATOM 26 OP2 U B1238 10.123 89.509 64.845 1.00 81.41 O
ATOM 27 O5' U B1238 12.612 89.598 65.232 1.00 87.36 O
TER
ATOM 2 P A A1239 10.455 94.049 65.165 1.00100.90 P
ATOM 3 OP1 A A1239 10.024 95.004 66.220 1.00101.64 O
ATOM 4 OP2 A A1239 9.880 92.676 65.143 1.00101.67 O
ATOM 5 O5' A A1239 10.177 94.727 63.750 1.00 97.84 O
ATOM 6 C5' A A1239 10.051 96.157 63.620 1.00 94.30 C
ATOM 7 C4' A A1239 8.595 96.545 63.465 1.00 91.91 C
ATOM 8 O4' A A1239 8.003 95.736 62.411 1.00 92.03 O
ATOM 9 C3' A A1239 7.699 96.285 64.666 1.00 90.30 C
ATOM 10 O3' A A1239 7.773 97.334 65.623 1.00 89.49 O
ATOM 11 C2' A A1239 6.320 96.185 64.026 1.00 89.90 C
ATOM 12 O2' A A1239 5.750 97.439 63.708 1.00 88.23 O
ATOM 13 C1' A A1239 6.651 95.432 62.737 1.00 89.68 C
ATOM 14 N9 A A1239 6.528 93.980 62.897 1.00 87.40 N
ATOM 15 C8 A A1239 7.531 93.049 63.024 1.00 86.32 C
ATOM 16 N7 A A1239 7.099 91.821 63.162 1.00 85.54 N
ATOM 17 C5 A A1239 5.718 91.947 63.120 1.00 85.12 C
ATOM 18 C6 A A1239 4.680 91.005 63.209 1.00 84.53 C
ATOM 19 N6 A A1239 4.877 89.694 63.365 1.00 83.04 N
ATOM 20 N1 A A1239 3.411 91.462 63.131 1.00 85.22 N
ATOM 21 C2 A A1239 3.212 92.778 62.977 1.00 85.53 C
ATOM 22 N3 A A1239 4.104 93.760 62.880 1.00 85.17 N
ATOM 23 C4 A A1239 5.353 93.272 62.958 1.00 85.84 C
ATOM 24 P C A1240 7.128 97.129 67.082 1.00 88.66 P
ATOM 25 OP1 C A1240 7.115 98.453 67.762 1.00 88.58 O
ATOM 26 OP2 C A1240 7.775 95.965 67.746 1.00 88.34 O
ATOM 27 O5' C A1240 5.616 96.740 66.784 1.00 85.86 O
TER
ATOM 1 O3' C B1236 10.006 86.264 58.181 1.00 53.41 O
ATOM 2 P A B1237 9.965 86.079 59.768 1.00 54.57 P
ATOM 3 OP1 A B1237 11.133 85.258 60.145 1.00 54.36 O
ATOM 4 OP2 A B1237 8.605 85.642 60.156 1.00 56.07 O
ATOM 5 O5' A B1237 10.173 87.553 60.324 1.00 57.68 O
ATOM 6 C5' A B1237 11.440 88.215 60.199 1.00 63.14 C
ATOM 7 C4' A B1237 11.300 89.673 60.550 1.00 66.86 C
ATOM 8 O4' A B1237 10.399 90.303 59.609 1.00 66.66 O
ATOM 9 C3' A B1237 10.690 89.959 61.911 1.00 69.48 C
ATOM 10 O3' A B1237 11.690 89.921 62.920 1.00 76.21 O
ATOM 11 C2' A B1237 10.129 91.361 61.726 1.00 67.46 C
ATOM 12 O2' A B1237 11.121 92.354 61.850 1.00 68.11 O
ATOM 13 C1' A B1237 9.654 91.307 60.271 1.00 66.82 C
ATOM 14 N9 A B1237 8.237 90.994 60.118 1.00 65.86 N
ATOM 15 C8 A B1237 7.626 89.766 60.158 1.00 65.78 C
ATOM 16 N7 A B1237 6.327 89.819 60.003 1.00 65.57 N
ATOM 17 C5 A B1237 6.065 91.172 59.847 1.00 65.41 C
ATOM 18 C6 A B1237 4.874 91.887 59.655 1.00 65.92 C
ATOM 19 N6 A B1237 3.667 91.319 59.589 1.00 65.57 N
ATOM 20 N1 A B1237 4.963 93.228 59.533 1.00 66.96 N
ATOM 21 C2 A B1237 6.173 93.801 59.609 1.00 66.64 C
ATOM 22 N3 A B1237 7.360 93.237 59.794 1.00 65.53 N
ATOM 23 C4 A B1237 7.235 91.905 59.908 1.00 65.49 C
ATOM 24 P U B1238 11.436 89.096 64.276 1.00 81.68 P
ATOM 25 OP1 U B1238 11.689 87.662 63.978 1.00 80.79 O
ATOM 26 OP2 U B1238 10.123 89.509 64.845 1.00 81.41 O
ATOM 27 O5' U B1238 12.612 89.598 65.232 1.00 87.36 O
TER
Atoms:
OP1: (10.024,95.004,66.220)
OP2: (9.880,92.676,65.143)
C3': (7.699,96.285,64.666)
C1': (6.651,95.432,62.737)
C5': (10.051,96.157,63.620)
O4': (8.003,95.736,62.411)
C8: (7.531,93.049,63.024)
O2': (5.750,97.439,63.708)
C6: (4.680,91.005,63.209)
C5: (5.718,91.947,63.120)
C4: (5.353,93.272,62.958)
P: (10.455,94.049,65.165)
C4': (8.595,96.545,63.465)
C2': (6.320,96.185,64.026)
C2: (3.212,92.778,62.977)
N1: (3.411,91.462,63.131)
N3: (4.104,93.760,62.880)
N6: (4.877,89.694,63.365)
N7: (7.099,91.821,63.162)
N9: (6.528,93.980,62.897)
O5': (10.177,94.727,63.750)
O3': (7.773,97.334,65.623)
OP2: (9.880,92.676,65.143)
C3': (7.699,96.285,64.666)
C1': (6.651,95.432,62.737)
C5': (10.051,96.157,63.620)
O4': (8.003,95.736,62.411)
C8: (7.531,93.049,63.024)
O2': (5.750,97.439,63.708)
C6: (4.680,91.005,63.209)
C5: (5.718,91.947,63.120)
C4: (5.353,93.272,62.958)
P: (10.455,94.049,65.165)
C4': (8.595,96.545,63.465)
C2': (6.320,96.185,64.026)
C2: (3.212,92.778,62.977)
N1: (3.411,91.462,63.131)
N3: (4.104,93.760,62.880)
N6: (4.877,89.694,63.365)
N7: (7.099,91.821,63.162)
N9: (6.528,93.980,62.897)
O5': (10.177,94.727,63.750)
O3': (7.773,97.334,65.623)
OP1: (11.133,85.258,60.145)
OP2: (8.605,85.642,60.156)
C3': (10.690,89.959,61.911)
C1': (9.654,91.307,60.271)
C5': (11.440,88.215,60.199)
O4': (10.399,90.303,59.609)
C8: (7.626,89.766,60.158)
O2': (11.121,92.354,61.850)
C6: (4.874,91.887,59.655)
C5: (6.065,91.172,59.847)
C4: (7.235,91.905,59.908)
P: (9.965,86.079,59.768)
C4': (11.300,89.673,60.550)
C2': (10.129,91.361,61.726)
C2: (6.173,93.801,59.609)
N1: (4.963,93.228,59.533)
N3: (7.360,93.237,59.794)
N6: (3.667,91.319,59.589)
N7: (6.327,89.819,60.003)
N9: (8.237,90.994,60.118)
O5': (10.173,87.553,60.324)
O3': (11.690,89.921,62.920)
OP2: (8.605,85.642,60.156)
C3': (10.690,89.959,61.911)
C1': (9.654,91.307,60.271)
C5': (11.440,88.215,60.199)
O4': (10.399,90.303,59.609)
C8: (7.626,89.766,60.158)
O2': (11.121,92.354,61.850)
C6: (4.874,91.887,59.655)
C5: (6.065,91.172,59.847)
C4: (7.235,91.905,59.908)
P: (9.965,86.079,59.768)
C4': (11.300,89.673,60.550)
C2': (10.129,91.361,61.726)
C2: (6.173,93.801,59.609)
N1: (4.963,93.228,59.533)
N3: (7.360,93.237,59.794)
N6: (3.667,91.319,59.589)
N7: (6.327,89.819,60.003)
N9: (8.237,90.994,60.118)
O5': (10.173,87.553,60.324)
O3': (11.690,89.921,62.920)
Image (generated by PyMOL):