ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1M90:A1239:A1237

Extra

PDB:
ATOM 1 O3' U A1238 11.850 94.642 65.967 1.00 98.57 O
ATOM 2 P A A1239 10.265 94.740 65.708 1.00 98.35 P
ATOM 3 OP1 A A1239 9.710 95.633 66.757 1.00 98.61 O
ATOM 4 OP2 A A1239 9.732 93.361 65.566 1.00 99.16 O
ATOM 5 O5' A A1239 10.129 95.473 64.301 1.00 95.13 O
ATOM 6 C5' A A1239 10.043 96.906 64.215 1.00 91.10 C
ATOM 7 C4' A A1239 8.606 97.333 64.017 1.00 88.44 C
ATOM 8 O4' A A1239 8.037 96.575 62.914 1.00 87.59 O
ATOM 9 C3' A A1239 7.656 97.052 65.170 1.00 86.81 C
ATOM 10 O3' A A1239 7.719 98.060 66.171 1.00 85.97 O
ATOM 11 C2' A A1239 6.306 97.026 64.470 1.00 86.20 C
ATOM 12 O2' A A1239 5.816 98.318 64.173 1.00 86.26 O
ATOM 13 C1' A A1239 6.665 96.307 63.171 1.00 85.32 C
ATOM 14 N9 A A1239 6.493 94.859 63.284 1.00 83.05 N
ATOM 15 C8 A A1239 7.466 93.898 63.419 1.00 82.44 C
ATOM 16 N7 A A1239 6.997 92.678 63.513 1.00 81.31 N
ATOM 17 C5 A A1239 5.622 92.845 63.436 1.00 81.51 C
ATOM 18 C6 A A1239 4.556 91.931 63.478 1.00 81.09 C
ATOM 19 N6 A A1239 4.714 90.613 63.625 1.00 80.01 N
ATOM 20 N1 A A1239 3.304 92.425 63.366 1.00 81.28 N
ATOM 21 C2 A A1239 3.145 93.749 63.227 1.00 81.30 C
ATOM 22 N3 A A1239 4.065 94.706 63.178 1.00 81.51 N
ATOM 23 C4 A A1239 5.298 94.182 63.288 1.00 81.99 C
ATOM 24 P C A1240 7.072 97.787 67.619 1.00 86.18 P
ATOM 25 OP1 C A1240 7.162 99.042 68.406 1.00 85.94 O
ATOM 26 OP2 C A1240 7.631 96.528 68.179 1.00 85.95 O
ATOM 27 O5' C A1240 5.532 97.538 67.321 1.00 84.02 O
TER

ATOM 1 O3' C B1236 9.912 86.888 58.370 1.00 60.10 O
ATOM 2 P A B1237 9.978 86.883 59.974 1.00 60.99 P
ATOM 3 OP1 A B1237 11.191 86.113 60.351 1.00 59.45 O
ATOM 4 OP2 A B1237 8.655 86.470 60.504 1.00 61.06 O
ATOM 5 O5' A B1237 10.187 88.417 60.343 1.00 63.43 O
ATOM 6 C5' A B1237 11.479 89.046 60.227 1.00 67.61 C
ATOM 7 C4' A B1237 11.395 90.474 60.689 1.00 70.31 C
ATOM 8 O4' A B1237 10.488 91.188 59.815 1.00 70.63 O
ATOM 9 C3' A B1237 10.799 90.659 62.074 1.00 73.17 C
ATOM 10 O3' A B1237 11.788 90.485 63.079 1.00 78.14 O
ATOM 11 C2' A B1237 10.247 92.079 62.012 1.00 72.11 C
ATOM 12 O2' A B1237 11.206 93.093 62.236 1.00 72.44 O
ATOM 13 C1' A B1237 9.761 92.147 60.562 1.00 71.52 C
ATOM 14 N9 A B1237 8.339 91.850 60.428 1.00 71.64 N
ATOM 15 C8 A B1237 7.717 90.626 60.455 1.00 72.11 C
ATOM 16 N7 A B1237 6.412 90.695 60.348 1.00 71.93 N
ATOM 17 C5 A B1237 6.159 92.053 60.238 1.00 71.94 C
ATOM 18 C6 A B1237 4.964 92.785 60.113 1.00 72.22 C
ATOM 19 N6 A B1237 3.752 92.228 60.099 1.00 71.80 N
ATOM 20 N1 A B1237 5.060 94.128 60.014 1.00 72.78 N
ATOM 21 C2 A B1237 6.278 94.688 60.051 1.00 72.73 C
ATOM 22 N3 A B1237 7.470 94.109 60.179 1.00 72.24 N
ATOM 23 C4 A B1237 7.338 92.775 60.269 1.00 72.01 C
ATOM 24 P U B1238 11.372 89.931 64.530 1.00 82.02 P
ATOM 25 OP1 U B1238 11.417 88.443 64.449 1.00 80.64 O
ATOM 26 OP2 U B1238 10.115 90.606 64.959 1.00 80.56 O
ATOM 27 O5' U B1238 12.583 90.421 65.454 1.00 86.76 O
TER

Atoms:
OP1: (9.710,95.633,66.757)
OP2: (9.732,93.361,65.566)
C3': (7.656,97.052,65.170)
C1': (6.665,96.307,63.171)
C5': (10.043,96.906,64.215)
O4': (8.037,96.575,62.914)
C8: (7.466,93.898,63.419)
O2': (5.816,98.318,64.173)
C6: (4.556,91.931,63.478)
C5: (5.622,92.845,63.436)
C4: (5.298,94.182,63.288)
P: (10.265,94.740,65.708)
C4': (8.606,97.333,64.017)
C2': (6.306,97.026,64.470)
C2: (3.145,93.749,63.227)
N1: (3.304,92.425,63.366)
N3: (4.065,94.706,63.178)
N6: (4.714,90.613,63.625)
N7: (6.997,92.678,63.513)
N9: (6.493,94.859,63.284)
O5': (10.129,95.473,64.301)
O3': (7.719,98.060,66.171)
OP1: (11.191,86.113,60.351)
OP2: (8.655,86.470,60.504)
C3': (10.799,90.659,62.074)
C1': (9.761,92.147,60.562)
C5': (11.479,89.046,60.227)
O4': (10.488,91.188,59.815)
C8: (7.717,90.626,60.455)
O2': (11.206,93.093,62.236)
C6: (4.964,92.785,60.113)
C5: (6.159,92.053,60.238)
C4: (7.338,92.775,60.269)
P: (9.978,86.883,59.974)
C4': (11.395,90.474,60.689)
C2': (10.247,92.079,62.012)
C2: (6.278,94.688,60.051)
N1: (5.060,94.128,60.014)
N3: (7.470,94.109,60.179)
N6: (3.752,92.228,60.099)
N7: (6.412,90.695,60.348)
N9: (8.339,91.850,60.428)
O5': (10.187,88.417,60.343)
O3': (11.788,90.485,63.079)
Image (generated by PyMOL):
PyMOL image
show in jmol