Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:02088:02087
Extra
PDB:
ATOM 1 O3' C A2087 129.857 112.772 32.893 1.00 91.91 O
ATOM 2 P U A2088 129.191 114.241 32.886 1.00 90.20 P
ATOM 3 OP1 U A2088 130.049 115.158 32.089 1.00 90.18 O
ATOM 4 OP2 U A2088 128.849 114.598 34.288 1.00 90.15 O
ATOM 5 O5' U A2088 127.849 114.039 32.059 1.00 87.79 O
ATOM 6 C5' U A2088 127.891 113.618 30.686 1.00 84.44 C
ATOM 7 C4' U A2088 126.509 113.666 30.089 1.00 82.53 C
ATOM 8 O4' U A2088 125.636 112.776 30.844 1.00 82.97 O
ATOM 9 C3' U A2088 125.833 115.033 30.118 1.00 80.83 C
ATOM 10 O3' U A2088 124.967 115.082 28.992 1.00 78.90 O
ATOM 11 C2' U A2088 125.048 114.974 31.426 1.00 80.55 C
ATOM 12 O2' U A2088 123.953 115.855 31.516 1.00 77.88 O
ATOM 13 C1' U A2088 124.572 113.523 31.411 1.00 82.60 C
ATOM 14 N1 U A2088 124.248 112.972 32.738 1.00 83.53 N
ATOM 15 C2 U A2088 122.938 112.583 32.971 1.00 83.12 C
ATOM 16 O2 U A2088 122.058 112.660 32.128 1.00 82.28 O
ATOM 17 N3 U A2088 122.696 112.096 34.230 1.00 83.83 N
ATOM 18 C4 U A2088 123.605 111.954 35.257 1.00 85.10 C
ATOM 19 O4 U A2088 123.223 111.527 36.348 1.00 85.81 O
ATOM 20 C5 U A2088 124.937 112.364 34.937 1.00 84.61 C
ATOM 21 C6 U A2088 125.207 112.847 33.722 1.00 83.89 C
ATOM 22 P C A2089 124.372 116.483 28.480 1.00 78.58 P
ATOM 23 OP1 C A2089 125.256 117.004 27.414 1.00 79.28 O
ATOM 24 OP2 C A2089 124.074 117.335 29.659 1.00 78.46 O
ATOM 25 O5' C A2089 123.007 116.019 27.800 1.00 78.12 O
TER
ATOM 1 O3' U B2086 132.080 109.400 37.727 1.00108.39 O
ATOM 2 P C B2087 131.361 110.841 37.645 1.00108.04 P
ATOM 3 OP1 C B2087 132.431 111.870 37.511 1.00107.31 O
ATOM 4 OP2 C B2087 130.392 110.934 38.768 1.00108.38 O
ATOM 5 O5' C B2087 130.545 110.806 36.273 1.00105.27 O
ATOM 6 C5' C B2087 131.232 110.735 35.008 1.00100.67 C
ATOM 7 C4' C B2087 130.248 110.579 33.867 1.00 97.18 C
ATOM 8 O4' C B2087 129.416 109.414 34.100 1.00 96.04 O
ATOM 9 C3' C B2087 129.249 111.705 33.634 1.00 94.63 C
ATOM 10 O3' C B2087 129.857 112.772 32.893 1.00 91.91 O
ATOM 11 C2' C B2087 128.154 110.999 32.834 1.00 94.97 C
ATOM 12 O2' C B2087 128.453 110.866 31.458 1.00 93.38 O
ATOM 13 C1' C B2087 128.166 109.598 33.457 1.00 95.78 C
ATOM 14 N1 C B2087 127.075 109.303 34.413 1.00 96.99 N
ATOM 15 C2 C B2087 125.798 108.995 33.908 1.00 96.45 C
ATOM 16 O2 C B2087 125.616 109.000 32.680 1.00 96.89 O
ATOM 17 N3 C B2087 124.800 108.698 34.771 1.00 96.19 N
ATOM 18 C4 C B2087 125.032 108.702 36.087 1.00 96.64 C
ATOM 19 N4 C B2087 124.019 108.393 36.902 1.00 96.22 N
ATOM 20 C5 C B2087 126.313 109.021 36.628 1.00 97.05 C
ATOM 21 C6 C B2087 127.295 109.315 35.764 1.00 97.14 C
ATOM 22 P U B2088 129.191 114.241 32.886 1.00 90.20 P
ATOM 23 OP1 U B2088 130.049 115.158 32.089 1.00 90.18 O
ATOM 24 OP2 U B2088 128.849 114.598 34.288 1.00 90.15 O
ATOM 25 O5' U B2088 127.849 114.039 32.059 1.00 87.79 O
TER
ATOM 2 P U A2088 129.191 114.241 32.886 1.00 90.20 P
ATOM 3 OP1 U A2088 130.049 115.158 32.089 1.00 90.18 O
ATOM 4 OP2 U A2088 128.849 114.598 34.288 1.00 90.15 O
ATOM 5 O5' U A2088 127.849 114.039 32.059 1.00 87.79 O
ATOM 6 C5' U A2088 127.891 113.618 30.686 1.00 84.44 C
ATOM 7 C4' U A2088 126.509 113.666 30.089 1.00 82.53 C
ATOM 8 O4' U A2088 125.636 112.776 30.844 1.00 82.97 O
ATOM 9 C3' U A2088 125.833 115.033 30.118 1.00 80.83 C
ATOM 10 O3' U A2088 124.967 115.082 28.992 1.00 78.90 O
ATOM 11 C2' U A2088 125.048 114.974 31.426 1.00 80.55 C
ATOM 12 O2' U A2088 123.953 115.855 31.516 1.00 77.88 O
ATOM 13 C1' U A2088 124.572 113.523 31.411 1.00 82.60 C
ATOM 14 N1 U A2088 124.248 112.972 32.738 1.00 83.53 N
ATOM 15 C2 U A2088 122.938 112.583 32.971 1.00 83.12 C
ATOM 16 O2 U A2088 122.058 112.660 32.128 1.00 82.28 O
ATOM 17 N3 U A2088 122.696 112.096 34.230 1.00 83.83 N
ATOM 18 C4 U A2088 123.605 111.954 35.257 1.00 85.10 C
ATOM 19 O4 U A2088 123.223 111.527 36.348 1.00 85.81 O
ATOM 20 C5 U A2088 124.937 112.364 34.937 1.00 84.61 C
ATOM 21 C6 U A2088 125.207 112.847 33.722 1.00 83.89 C
ATOM 22 P C A2089 124.372 116.483 28.480 1.00 78.58 P
ATOM 23 OP1 C A2089 125.256 117.004 27.414 1.00 79.28 O
ATOM 24 OP2 C A2089 124.074 117.335 29.659 1.00 78.46 O
ATOM 25 O5' C A2089 123.007 116.019 27.800 1.00 78.12 O
TER
ATOM 1 O3' U B2086 132.080 109.400 37.727 1.00108.39 O
ATOM 2 P C B2087 131.361 110.841 37.645 1.00108.04 P
ATOM 3 OP1 C B2087 132.431 111.870 37.511 1.00107.31 O
ATOM 4 OP2 C B2087 130.392 110.934 38.768 1.00108.38 O
ATOM 5 O5' C B2087 130.545 110.806 36.273 1.00105.27 O
ATOM 6 C5' C B2087 131.232 110.735 35.008 1.00100.67 C
ATOM 7 C4' C B2087 130.248 110.579 33.867 1.00 97.18 C
ATOM 8 O4' C B2087 129.416 109.414 34.100 1.00 96.04 O
ATOM 9 C3' C B2087 129.249 111.705 33.634 1.00 94.63 C
ATOM 10 O3' C B2087 129.857 112.772 32.893 1.00 91.91 O
ATOM 11 C2' C B2087 128.154 110.999 32.834 1.00 94.97 C
ATOM 12 O2' C B2087 128.453 110.866 31.458 1.00 93.38 O
ATOM 13 C1' C B2087 128.166 109.598 33.457 1.00 95.78 C
ATOM 14 N1 C B2087 127.075 109.303 34.413 1.00 96.99 N
ATOM 15 C2 C B2087 125.798 108.995 33.908 1.00 96.45 C
ATOM 16 O2 C B2087 125.616 109.000 32.680 1.00 96.89 O
ATOM 17 N3 C B2087 124.800 108.698 34.771 1.00 96.19 N
ATOM 18 C4 C B2087 125.032 108.702 36.087 1.00 96.64 C
ATOM 19 N4 C B2087 124.019 108.393 36.902 1.00 96.22 N
ATOM 20 C5 C B2087 126.313 109.021 36.628 1.00 97.05 C
ATOM 21 C6 C B2087 127.295 109.315 35.764 1.00 97.14 C
ATOM 22 P U B2088 129.191 114.241 32.886 1.00 90.20 P
ATOM 23 OP1 U B2088 130.049 115.158 32.089 1.00 90.18 O
ATOM 24 OP2 U B2088 128.849 114.598 34.288 1.00 90.15 O
ATOM 25 O5' U B2088 127.849 114.039 32.059 1.00 87.79 O
TER
Atoms:
C4: (123.605,111.954,35.257)
N3: (122.696,112.096,34.230)
OP1: (130.049,115.158,32.089)
OP2: (128.849,114.598,34.288)
C2: (122.938,112.583,32.971)
C1': (124.572,113.523,31.411)
C3': (125.833,115.033,30.118)
O5': (127.849,114.039,32.059)
O4': (125.636,112.776,30.844)
C5': (127.891,113.618,30.686)
P: (129.191,114.241,32.886)
C4': (126.509,113.666,30.089)
C2': (125.048,114.974,31.426)
O2': (123.953,115.855,31.516)
N1: (124.248,112.972,32.738)
O4: (123.223,111.527,36.348)
O2: (122.058,112.660,32.128)
C6: (125.207,112.847,33.722)
C5: (124.937,112.364,34.937)
O3': (124.967,115.082,28.992)
N3: (122.696,112.096,34.230)
OP1: (130.049,115.158,32.089)
OP2: (128.849,114.598,34.288)
C2: (122.938,112.583,32.971)
C1': (124.572,113.523,31.411)
C3': (125.833,115.033,30.118)
O5': (127.849,114.039,32.059)
O4': (125.636,112.776,30.844)
C5': (127.891,113.618,30.686)
P: (129.191,114.241,32.886)
C4': (126.509,113.666,30.089)
C2': (125.048,114.974,31.426)
O2': (123.953,115.855,31.516)
N1: (124.248,112.972,32.738)
O4: (123.223,111.527,36.348)
O2: (122.058,112.660,32.128)
C6: (125.207,112.847,33.722)
C5: (124.937,112.364,34.937)
O3': (124.967,115.082,28.992)
C2: (125.798,108.995,33.908)
OP1: (132.431,111.870,37.511)
OP2: (130.392,110.934,38.768)
C4: (125.032,108.702,36.087)
O5': (130.545,110.806,36.273)
C3': (129.249,111.705,33.634)
C1': (128.166,109.598,33.457)
O4': (129.416,109.414,34.100)
C5': (131.232,110.735,35.008)
P: (131.361,110.841,37.645)
O2: (125.616,109.000,32.680)
C4': (130.248,110.579,33.867)
C2': (128.154,110.999,32.834)
O2': (128.453,110.866,31.458)
N1: (127.075,109.303,34.413)
N3: (124.800,108.698,34.771)
N4: (124.019,108.393,36.902)
C6: (127.295,109.315,35.764)
C5: (126.313,109.021,36.628)
O3': (129.857,112.772,32.893)
OP1: (132.431,111.870,37.511)
OP2: (130.392,110.934,38.768)
C4: (125.032,108.702,36.087)
O5': (130.545,110.806,36.273)
C3': (129.249,111.705,33.634)
C1': (128.166,109.598,33.457)
O4': (129.416,109.414,34.100)
C5': (131.232,110.735,35.008)
P: (131.361,110.841,37.645)
O2: (125.616,109.000,32.680)
C4': (130.248,110.579,33.867)
C2': (128.154,110.999,32.834)
O2': (128.453,110.866,31.458)
N1: (127.075,109.303,34.413)
N3: (124.800,108.698,34.771)
N4: (124.019,108.393,36.902)
C6: (127.295,109.315,35.764)
C5: (126.313,109.021,36.628)
O3': (129.857,112.772,32.893)
Image (generated by PyMOL):