Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A518:A515
Extra
PDB:
ATOM 1 O3' U A 517 50.128-106.200 -29.082 1.00 60.45 O
ATOM 2 P A A 518 50.400-107.010 -30.461 1.00 64.31 P
ATOM 3 OP1 A A 518 49.742-108.343 -30.401 1.00 57.10 O
ATOM 4 OP2 A A 518 51.865-106.928 -30.747 1.00 64.91 O
ATOM 5 O5' A A 518 49.587-106.177 -31.553 1.00 65.18 O
ATOM 6 C5' A A 518 48.220-105.830 -31.331 1.00 57.84 C
ATOM 7 C4' A A 518 47.789-104.773 -32.325 1.00 58.58 C
ATOM 8 O4' A A 518 47.777-105.338 -33.664 1.00 60.51 O
ATOM 9 C3' A A 518 46.386-104.214 -32.128 1.00 58.24 C
ATOM 10 O3' A A 518 46.419-103.160 -31.169 1.00 53.88 O
ATOM 11 C2' A A 518 46.004-103.754 -33.533 1.00 53.12 C
ATOM 12 O2' A A 518 46.547-102.507 -33.871 1.00 44.20 O
ATOM 13 C1' A A 518 46.684-104.809 -34.403 1.00 57.58 C
ATOM 14 N9 A A 518 45.804-105.923 -34.784 1.00 63.83 N
ATOM 15 C8 A A 518 46.000-107.265 -34.540 1.00 58.31 C
ATOM 16 N7 A A 518 45.050-108.037 -35.012 1.00 58.99 N
ATOM 17 C5 A A 518 44.167-107.149 -35.614 1.00 64.55 C
ATOM 18 C6 A A 518 42.960-107.344 -36.313 1.00 66.13 C
ATOM 19 N6 A A 518 42.426-108.549 -36.558 1.00 68.83 N
ATOM 20 N1 A A 518 42.318-106.246 -36.766 1.00 60.88 N
ATOM 21 C2 A A 518 42.864-105.045 -36.544 1.00 56.07 C
ATOM 22 N3 A A 518 43.996-104.735 -35.921 1.00 58.87 N
ATOM 23 C4 A A 518 44.610-105.842 -35.471 1.00 64.77 C
ATOM 24 P G A 519 45.630-103.327 -29.781 1.00 52.45 P
ATOM 25 OP1 G A 519 46.077-102.210 -28.923 1.00 51.28 O
ATOM 26 OP2 G A 519 45.855-104.730 -29.339 1.00 52.98 O
ATOM 27 O5' G A 519 44.110-103.046 -30.181 1.00 56.56 O
TER
ATOM 1 O3' A B 514 44.830-116.154 -36.362 1.00 52.19 O
ATOM 2 P A B 515 44.407-115.477 -34.967 1.00 54.89 P
ATOM 3 OP1 A B 515 44.694-116.410 -33.841 1.00 57.25 O
ATOM 4 OP2 A B 515 43.012-114.991 -35.167 1.00 51.22 O
ATOM 5 O5' A B 515 45.417-114.237 -34.806 1.00 55.78 O
ATOM 6 C5' A B 515 46.655-114.354 -34.073 1.00 51.84 C
ATOM 7 C4' A B 515 47.362-113.011 -33.993 1.00 50.92 C
ATOM 8 O4' A B 515 47.566-112.522 -35.335 1.00 53.68 O
ATOM 9 C3' A B 515 46.621-111.894 -33.267 1.00 49.13 C
ATOM 10 O3' A B 515 47.052-111.868 -31.923 1.00 41.16 O
ATOM 11 C2' A B 515 47.124-110.620 -33.950 1.00 51.49 C
ATOM 12 O2' A B 515 48.281-110.040 -33.377 1.00 41.67 O
ATOM 13 C1' A B 515 47.422-111.113 -35.365 1.00 53.80 C
ATOM 14 N9 A B 515 46.359-110.787 -36.308 1.00 56.59 N
ATOM 15 C8 A B 515 45.210-111.494 -36.556 1.00 58.55 C
ATOM 16 N7 A B 515 44.450-110.958 -37.474 1.00 57.62 N
ATOM 17 C5 A B 515 45.141-109.824 -37.855 1.00 58.61 C
ATOM 18 C6 A B 515 44.863-108.831 -38.792 1.00 58.00 C
ATOM 19 N6 A B 515 43.775-108.833 -39.568 1.00 64.41 N
ATOM 20 N1 A B 515 45.748-107.825 -38.920 1.00 56.59 N
ATOM 21 C2 A B 515 46.839-107.836 -38.153 1.00 54.60 C
ATOM 22 N3 A B 515 47.218-108.719 -37.241 1.00 53.56 N
ATOM 23 C4 A B 515 46.315-109.701 -37.140 1.00 56.80 C
ATOM 24 P A B 516 46.112-112.427 -30.759 1.00 49.47 P
ATOM 25 OP1 A B 516 47.028-113.128 -29.817 1.00 43.00 O
ATOM 26 OP2 A B 516 44.962-113.172 -31.354 1.00 51.12 O
ATOM 27 O5' A B 516 45.640-111.074 -30.066 1.00 46.33 O
TER
ATOM 2 P A A 518 50.400-107.010 -30.461 1.00 64.31 P
ATOM 3 OP1 A A 518 49.742-108.343 -30.401 1.00 57.10 O
ATOM 4 OP2 A A 518 51.865-106.928 -30.747 1.00 64.91 O
ATOM 5 O5' A A 518 49.587-106.177 -31.553 1.00 65.18 O
ATOM 6 C5' A A 518 48.220-105.830 -31.331 1.00 57.84 C
ATOM 7 C4' A A 518 47.789-104.773 -32.325 1.00 58.58 C
ATOM 8 O4' A A 518 47.777-105.338 -33.664 1.00 60.51 O
ATOM 9 C3' A A 518 46.386-104.214 -32.128 1.00 58.24 C
ATOM 10 O3' A A 518 46.419-103.160 -31.169 1.00 53.88 O
ATOM 11 C2' A A 518 46.004-103.754 -33.533 1.00 53.12 C
ATOM 12 O2' A A 518 46.547-102.507 -33.871 1.00 44.20 O
ATOM 13 C1' A A 518 46.684-104.809 -34.403 1.00 57.58 C
ATOM 14 N9 A A 518 45.804-105.923 -34.784 1.00 63.83 N
ATOM 15 C8 A A 518 46.000-107.265 -34.540 1.00 58.31 C
ATOM 16 N7 A A 518 45.050-108.037 -35.012 1.00 58.99 N
ATOM 17 C5 A A 518 44.167-107.149 -35.614 1.00 64.55 C
ATOM 18 C6 A A 518 42.960-107.344 -36.313 1.00 66.13 C
ATOM 19 N6 A A 518 42.426-108.549 -36.558 1.00 68.83 N
ATOM 20 N1 A A 518 42.318-106.246 -36.766 1.00 60.88 N
ATOM 21 C2 A A 518 42.864-105.045 -36.544 1.00 56.07 C
ATOM 22 N3 A A 518 43.996-104.735 -35.921 1.00 58.87 N
ATOM 23 C4 A A 518 44.610-105.842 -35.471 1.00 64.77 C
ATOM 24 P G A 519 45.630-103.327 -29.781 1.00 52.45 P
ATOM 25 OP1 G A 519 46.077-102.210 -28.923 1.00 51.28 O
ATOM 26 OP2 G A 519 45.855-104.730 -29.339 1.00 52.98 O
ATOM 27 O5' G A 519 44.110-103.046 -30.181 1.00 56.56 O
TER
ATOM 1 O3' A B 514 44.830-116.154 -36.362 1.00 52.19 O
ATOM 2 P A B 515 44.407-115.477 -34.967 1.00 54.89 P
ATOM 3 OP1 A B 515 44.694-116.410 -33.841 1.00 57.25 O
ATOM 4 OP2 A B 515 43.012-114.991 -35.167 1.00 51.22 O
ATOM 5 O5' A B 515 45.417-114.237 -34.806 1.00 55.78 O
ATOM 6 C5' A B 515 46.655-114.354 -34.073 1.00 51.84 C
ATOM 7 C4' A B 515 47.362-113.011 -33.993 1.00 50.92 C
ATOM 8 O4' A B 515 47.566-112.522 -35.335 1.00 53.68 O
ATOM 9 C3' A B 515 46.621-111.894 -33.267 1.00 49.13 C
ATOM 10 O3' A B 515 47.052-111.868 -31.923 1.00 41.16 O
ATOM 11 C2' A B 515 47.124-110.620 -33.950 1.00 51.49 C
ATOM 12 O2' A B 515 48.281-110.040 -33.377 1.00 41.67 O
ATOM 13 C1' A B 515 47.422-111.113 -35.365 1.00 53.80 C
ATOM 14 N9 A B 515 46.359-110.787 -36.308 1.00 56.59 N
ATOM 15 C8 A B 515 45.210-111.494 -36.556 1.00 58.55 C
ATOM 16 N7 A B 515 44.450-110.958 -37.474 1.00 57.62 N
ATOM 17 C5 A B 515 45.141-109.824 -37.855 1.00 58.61 C
ATOM 18 C6 A B 515 44.863-108.831 -38.792 1.00 58.00 C
ATOM 19 N6 A B 515 43.775-108.833 -39.568 1.00 64.41 N
ATOM 20 N1 A B 515 45.748-107.825 -38.920 1.00 56.59 N
ATOM 21 C2 A B 515 46.839-107.836 -38.153 1.00 54.60 C
ATOM 22 N3 A B 515 47.218-108.719 -37.241 1.00 53.56 N
ATOM 23 C4 A B 515 46.315-109.701 -37.140 1.00 56.80 C
ATOM 24 P A B 516 46.112-112.427 -30.759 1.00 49.47 P
ATOM 25 OP1 A B 516 47.028-113.128 -29.817 1.00 43.00 O
ATOM 26 OP2 A B 516 44.962-113.172 -31.354 1.00 51.12 O
ATOM 27 O5' A B 516 45.640-111.074 -30.066 1.00 46.33 O
TER
Atoms:
OP1: (49.742,-108.343,-30.401)
OP2: (51.865,-106.928,-30.747)
C3': (46.386,-104.214,-32.128)
C1': (46.684,-104.809,-34.403)
C5': (48.220,-105.830,-31.331)
O4': (47.777,-105.338,-33.664)
C8: (46.000,-107.265,-34.540)
O2': (46.547,-102.507,-33.871)
C6: (42.960,-107.344,-36.313)
C5: (44.167,-107.149,-35.614)
C4: (44.610,-105.842,-35.471)
P: (50.400,-107.010,-30.461)
C4': (47.789,-104.773,-32.325)
C2': (46.004,-103.754,-33.533)
C2: (42.864,-105.045,-36.544)
N1: (42.318,-106.246,-36.766)
N3: (43.996,-104.735,-35.921)
N6: (42.426,-108.549,-36.558)
N7: (45.050,-108.037,-35.012)
N9: (45.804,-105.923,-34.784)
O5': (49.587,-106.177,-31.553)
O3': (46.419,-103.160,-31.169)
OP2: (51.865,-106.928,-30.747)
C3': (46.386,-104.214,-32.128)
C1': (46.684,-104.809,-34.403)
C5': (48.220,-105.830,-31.331)
O4': (47.777,-105.338,-33.664)
C8: (46.000,-107.265,-34.540)
O2': (46.547,-102.507,-33.871)
C6: (42.960,-107.344,-36.313)
C5: (44.167,-107.149,-35.614)
C4: (44.610,-105.842,-35.471)
P: (50.400,-107.010,-30.461)
C4': (47.789,-104.773,-32.325)
C2': (46.004,-103.754,-33.533)
C2: (42.864,-105.045,-36.544)
N1: (42.318,-106.246,-36.766)
N3: (43.996,-104.735,-35.921)
N6: (42.426,-108.549,-36.558)
N7: (45.050,-108.037,-35.012)
N9: (45.804,-105.923,-34.784)
O5': (49.587,-106.177,-31.553)
O3': (46.419,-103.160,-31.169)
OP1: (44.694,-116.410,-33.841)
OP2: (43.012,-114.991,-35.167)
C3': (46.621,-111.894,-33.267)
C1': (47.422,-111.113,-35.365)
C5': (46.655,-114.354,-34.073)
O4': (47.566,-112.522,-35.335)
C8: (45.210,-111.494,-36.556)
O2': (48.281,-110.040,-33.377)
C6: (44.863,-108.831,-38.792)
C5: (45.141,-109.824,-37.855)
C4: (46.315,-109.701,-37.140)
P: (44.407,-115.477,-34.967)
C4': (47.362,-113.011,-33.993)
C2': (47.124,-110.620,-33.950)
C2: (46.839,-107.836,-38.153)
N1: (45.748,-107.825,-38.920)
N3: (47.218,-108.719,-37.241)
N6: (43.775,-108.833,-39.568)
N7: (44.450,-110.958,-37.474)
N9: (46.359,-110.787,-36.308)
O5': (45.417,-114.237,-34.806)
O3': (47.052,-111.868,-31.923)
OP2: (43.012,-114.991,-35.167)
C3': (46.621,-111.894,-33.267)
C1': (47.422,-111.113,-35.365)
C5': (46.655,-114.354,-34.073)
O4': (47.566,-112.522,-35.335)
C8: (45.210,-111.494,-36.556)
O2': (48.281,-110.040,-33.377)
C6: (44.863,-108.831,-38.792)
C5: (45.141,-109.824,-37.855)
C4: (46.315,-109.701,-37.140)
P: (44.407,-115.477,-34.967)
C4': (47.362,-113.011,-33.993)
C2': (47.124,-110.620,-33.950)
C2: (46.839,-107.836,-38.153)
N1: (45.748,-107.825,-38.920)
N3: (47.218,-108.719,-37.241)
N6: (43.775,-108.833,-39.568)
N7: (44.450,-110.958,-37.474)
N9: (46.359,-110.787,-36.308)
O5': (45.417,-114.237,-34.806)
O3': (47.052,-111.868,-31.923)
Image (generated by PyMOL):