ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1F:A341:A339

Extra

PDB:
ATOM 1 O3' G A 340 -3.521 195.045 212.557 1.00 61.14 O
ATOM 2 P A A 341 -4.410 193.884 213.215 1.00 64.79 P
ATOM 3 OP1 A A 341 -5.548 193.621 212.303 1.00 63.06 O
ATOM 4 OP2 A A 341 -4.677 194.214 214.630 1.00 68.80 O
ATOM 5 O5' A A 341 -3.450 192.617 213.168 1.00 71.48 O
ATOM 6 C5' A A 341 -3.403 191.803 212.007 1.00 68.23 C
ATOM 7 C4' A A 341 -2.319 190.748 212.137 1.00 67.28 C
ATOM 8 O4' A A 341 -1.058 191.423 212.358 1.00 64.01 O
ATOM 9 C3' A A 341 -2.447 189.768 213.302 1.00 60.21 C
ATOM 10 O3' A A 341 -1.851 188.524 212.948 1.00 65.68 O
ATOM 11 C2' A A 341 -1.618 190.441 214.383 1.00 60.48 C
ATOM 12 O2' A A 341 -1.148 189.520 215.334 1.00 64.49 O
ATOM 13 C1' A A 341 -0.459 190.909 213.528 1.00 68.70 C
ATOM 14 N9 A A 341 0.357 191.961 214.119 1.00 73.05 N
ATOM 15 C8 A A 341 -0.044 193.086 214.788 1.00 75.66 C
ATOM 16 N7 A A 341 0.956 193.839 215.188 1.00 76.77 N
ATOM 17 C5 A A 341 2.085 193.160 214.746 1.00 73.88 C
ATOM 18 C6 A A 341 3.470 193.421 214.842 1.00 75.70 C
ATOM 19 N6 A A 341 3.997 194.491 215.443 1.00 78.58 N
ATOM 20 N1 A A 341 4.309 192.526 214.288 1.00 70.79 N
ATOM 21 C2 A A 341 3.799 191.451 213.678 1.00 73.73 C
ATOM 22 N3 A A 341 2.528 191.095 213.524 1.00 67.23 N
ATOM 23 C4 A A 341 1.723 192.005 214.083 1.00 68.48 C
ATOM 24 P G A 342 -2.678 187.368 212.196 1.00 70.96 P
ATOM 25 OP1 G A 342 -1.775 186.197 212.102 1.00 80.25 O
ATOM 26 OP2 G A 342 -3.313 187.897 210.961 1.00 61.38 O
ATOM 27 O5' G A 342 -3.838 187.018 213.244 1.00 61.24 O
TER

ATOM 1 O3' C B 338 1.908 195.379 221.390 1.00 73.78 O
ATOM 2 P A B 339 0.845 196.505 220.983 1.00 77.11 P
ATOM 3 OP1 A B 339 1.613 197.598 220.343 1.00 82.55 O
ATOM 4 OP2 A B 339 -0.019 196.769 222.165 1.00 87.49 O
ATOM 5 O5' A B 339 -0.086 195.811 219.879 1.00 87.07 O
ATOM 6 C5' A B 339 0.479 195.285 218.685 1.00 85.30 C
ATOM 7 C4' A B 339 -0.566 194.476 217.946 1.00 73.40 C
ATOM 8 O4' A B 339 -0.780 193.216 218.626 1.00 73.53 O
ATOM 9 C3' A B 339 -1.930 195.139 217.907 1.00 75.09 C
ATOM 10 O3' A B 339 -1.991 195.998 216.766 1.00 78.81 O
ATOM 11 C2' A B 339 -2.869 193.939 217.799 1.00 80.87 C
ATOM 12 O2' A B 339 -3.005 193.483 216.466 1.00 85.06 O
ATOM 13 C1' A B 339 -2.157 192.883 218.640 1.00 76.39 C
ATOM 14 N9 A B 339 -2.608 192.809 220.028 1.00 77.15 N
ATOM 15 C8 A B 339 -1.964 193.315 221.114 1.00 82.75 C
ATOM 16 N7 A B 339 -2.585 193.108 222.247 1.00 88.26 N
ATOM 17 C5 A B 339 -3.718 192.416 221.879 1.00 74.97 C
ATOM 18 C6 A B 339 -4.786 191.910 222.632 1.00 72.79 C
ATOM 19 N6 A B 339 -4.874 192.039 223.960 1.00 74.48 N
ATOM 20 N1 A B 339 -5.759 191.266 221.964 1.00 72.62 N
ATOM 21 C2 A B 339 -5.657 191.152 220.637 1.00 78.46 C
ATOM 22 N3 A B 339 -4.701 191.591 219.822 1.00 75.08 N
ATOM 23 C4 A B 339 -3.750 192.221 220.516 1.00 74.14 C
ATOM 24 P G B 340 -1.698 197.574 216.888 1.00 78.60 P
ATOM 25 OP1 G B 340 -0.271 197.792 216.569 1.00 81.64 O
ATOM 26 OP2 G B 340 -2.282 198.102 218.156 1.00 69.34 O
ATOM 27 O5' G B 340 -2.549 198.106 215.646 1.00 83.56 O
TER

Atoms:
OP1: (-5.548,193.621,212.303)
OP2: (-4.677,194.214,214.630)
C3': (-2.447,189.768,213.302)
C1': (-0.459,190.909,213.528)
C5': (-3.403,191.803,212.007)
O4': (-1.058,191.423,212.358)
C8: (-0.044,193.086,214.788)
O2': (-1.148,189.520,215.334)
C6: (3.470,193.421,214.842)
C5: (2.085,193.160,214.746)
C4: (1.723,192.005,214.083)
P: (-4.410,193.884,213.215)
C4': (-2.319,190.748,212.137)
C2': (-1.618,190.441,214.383)
C2: (3.799,191.451,213.678)
N1: (4.309,192.526,214.288)
N3: (2.528,191.095,213.524)
N6: (3.997,194.491,215.443)
N7: (0.956,193.839,215.188)
N9: (0.357,191.961,214.119)
O5': (-3.450,192.617,213.168)
O3': (-1.851,188.524,212.948)
OP1: (1.613,197.598,220.343)
OP2: (-0.019,196.769,222.165)
C3': (-1.930,195.139,217.907)
C1': (-2.157,192.883,218.640)
C5': (0.479,195.285,218.685)
O4': (-0.780,193.216,218.626)
C8: (-1.964,193.315,221.114)
O2': (-3.005,193.483,216.466)
C6: (-4.786,191.910,222.632)
C5: (-3.718,192.416,221.879)
C4: (-3.750,192.221,220.516)
P: (0.845,196.505,220.983)
C4': (-0.566,194.476,217.946)
C2': (-2.869,193.939,217.799)
C2: (-5.657,191.152,220.637)
N1: (-5.759,191.266,221.964)
N3: (-4.701,191.591,219.822)
N6: (-4.874,192.039,223.960)
N7: (-2.585,193.108,222.247)
N9: (-2.608,192.809,220.028)
O5': (-0.086,195.811,219.879)
O3': (-1.991,195.998,216.766)
Image (generated by PyMOL):
PyMOL image
show in jmol