Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ7:01239:01237
Extra
PDB:
ATOM 1 O3' U A1238 11.851 94.953 65.491 1.00110.56 O
ATOM 2 P A A1239 10.244 95.021 65.408 1.00110.25 P
ATOM 3 OP1 A A1239 9.805 95.997 66.438 1.00110.87 O
ATOM 4 OP2 A A1239 9.707 93.635 65.441 1.00111.33 O
ATOM 5 O5' A A1239 9.933 95.653 63.978 1.00107.65 O
ATOM 6 C5' A A1239 9.871 97.082 63.795 1.00103.97 C
ATOM 7 C4' A A1239 8.431 97.535 63.674 1.00101.18 C
ATOM 8 O4' A A1239 7.792 96.801 62.594 1.00 99.89 O
ATOM 9 C3' A A1239 7.541 97.261 64.878 1.00 99.34 C
ATOM 10 O3' A A1239 7.644 98.260 65.882 1.00 98.00 O
ATOM 11 C2' A A1239 6.156 97.236 64.254 1.00 98.47 C
ATOM 12 O2' A A1239 5.655 98.534 63.996 1.00 97.83 O
ATOM 13 C1' A A1239 6.445 96.507 62.943 1.00 97.58 C
ATOM 14 N9 A A1239 6.321 95.057 63.098 1.00 94.86 N
ATOM 15 C8 A A1239 7.329 94.135 63.247 1.00 94.14 C
ATOM 16 N7 A A1239 6.905 92.903 63.377 1.00 93.36 N
ATOM 17 C5 A A1239 5.524 93.019 63.310 1.00 93.14 C
ATOM 18 C6 A A1239 4.496 92.070 63.384 1.00 92.44 C
ATOM 19 N6 A A1239 4.706 90.763 63.554 1.00 92.20 N
ATOM 20 N1 A A1239 3.225 92.513 63.278 1.00 92.36 N
ATOM 21 C2 A A1239 3.015 93.824 63.109 1.00 92.59 C
ATOM 22 N3 A A1239 3.899 94.814 63.025 1.00 92.79 N
ATOM 23 C4 A A1239 5.151 94.339 63.134 1.00 93.44 C
ATOM 24 P C A1240 7.077 97.963 67.356 1.00 97.22 P
ATOM 25 OP1 C A1240 7.290 99.177 68.181 1.00 97.99 O
ATOM 26 OP2 C A1240 7.605 96.653 67.824 1.00 97.57 O
ATOM 27 O5' C A1240 5.509 97.796 67.158 1.00 94.84 O
TER
ATOM 1 O3' C B1236 9.635 87.173 58.204 1.00 69.95 O
ATOM 2 P A B1237 9.627 87.143 59.806 1.00 70.62 P
ATOM 3 OP1 A B1237 10.793 86.319 60.221 1.00 69.00 O
ATOM 4 OP2 A B1237 8.264 86.778 60.271 1.00 71.11 O
ATOM 5 O5' A B1237 9.872 88.662 60.214 1.00 73.27 O
ATOM 6 C5' A B1237 11.158 89.289 60.025 1.00 77.27 C
ATOM 7 C4' A B1237 11.089 90.736 60.441 1.00 79.98 C
ATOM 8 O4' A B1237 10.168 91.431 59.565 1.00 80.24 O
ATOM 9 C3' A B1237 10.533 90.968 61.837 1.00 82.99 C
ATOM 10 O3' A B1237 11.555 90.849 62.819 1.00 89.12 O
ATOM 11 C2' A B1237 9.978 92.383 61.742 1.00 81.53 C
ATOM 12 O2' A B1237 10.962 93.386 61.891 1.00 81.35 O
ATOM 13 C1' A B1237 9.445 92.400 60.306 1.00 80.78 C
ATOM 14 N9 A B1237 8.021 92.082 60.207 1.00 80.50 N
ATOM 15 C8 A B1237 7.425 90.844 60.211 1.00 80.44 C
ATOM 16 N7 A B1237 6.119 90.887 60.119 1.00 79.54 N
ATOM 17 C5 A B1237 5.834 92.242 60.047 1.00 79.98 C
ATOM 18 C6 A B1237 4.626 92.948 59.945 1.00 80.29 C
ATOM 19 N6 A B1237 3.429 92.362 59.908 1.00 80.45 N
ATOM 20 N1 A B1237 4.690 94.296 59.888 1.00 80.83 N
ATOM 21 C2 A B1237 5.893 94.883 59.941 1.00 80.62 C
ATOM 22 N3 A B1237 7.097 94.328 60.047 1.00 79.78 N
ATOM 23 C4 A B1237 6.997 92.989 60.095 1.00 80.20 C
ATOM 24 P U B1238 11.247 90.128 64.225 1.00 93.63 P
ATOM 25 OP1 U B1238 11.433 88.663 64.022 1.00 92.35 O
ATOM 26 OP2 U B1238 9.950 90.639 64.751 1.00 92.96 O
ATOM 27 O5' U B1238 12.430 90.646 65.165 1.00 98.73 O
TER
ATOM 2 P A A1239 10.244 95.021 65.408 1.00110.25 P
ATOM 3 OP1 A A1239 9.805 95.997 66.438 1.00110.87 O
ATOM 4 OP2 A A1239 9.707 93.635 65.441 1.00111.33 O
ATOM 5 O5' A A1239 9.933 95.653 63.978 1.00107.65 O
ATOM 6 C5' A A1239 9.871 97.082 63.795 1.00103.97 C
ATOM 7 C4' A A1239 8.431 97.535 63.674 1.00101.18 C
ATOM 8 O4' A A1239 7.792 96.801 62.594 1.00 99.89 O
ATOM 9 C3' A A1239 7.541 97.261 64.878 1.00 99.34 C
ATOM 10 O3' A A1239 7.644 98.260 65.882 1.00 98.00 O
ATOM 11 C2' A A1239 6.156 97.236 64.254 1.00 98.47 C
ATOM 12 O2' A A1239 5.655 98.534 63.996 1.00 97.83 O
ATOM 13 C1' A A1239 6.445 96.507 62.943 1.00 97.58 C
ATOM 14 N9 A A1239 6.321 95.057 63.098 1.00 94.86 N
ATOM 15 C8 A A1239 7.329 94.135 63.247 1.00 94.14 C
ATOM 16 N7 A A1239 6.905 92.903 63.377 1.00 93.36 N
ATOM 17 C5 A A1239 5.524 93.019 63.310 1.00 93.14 C
ATOM 18 C6 A A1239 4.496 92.070 63.384 1.00 92.44 C
ATOM 19 N6 A A1239 4.706 90.763 63.554 1.00 92.20 N
ATOM 20 N1 A A1239 3.225 92.513 63.278 1.00 92.36 N
ATOM 21 C2 A A1239 3.015 93.824 63.109 1.00 92.59 C
ATOM 22 N3 A A1239 3.899 94.814 63.025 1.00 92.79 N
ATOM 23 C4 A A1239 5.151 94.339 63.134 1.00 93.44 C
ATOM 24 P C A1240 7.077 97.963 67.356 1.00 97.22 P
ATOM 25 OP1 C A1240 7.290 99.177 68.181 1.00 97.99 O
ATOM 26 OP2 C A1240 7.605 96.653 67.824 1.00 97.57 O
ATOM 27 O5' C A1240 5.509 97.796 67.158 1.00 94.84 O
TER
ATOM 1 O3' C B1236 9.635 87.173 58.204 1.00 69.95 O
ATOM 2 P A B1237 9.627 87.143 59.806 1.00 70.62 P
ATOM 3 OP1 A B1237 10.793 86.319 60.221 1.00 69.00 O
ATOM 4 OP2 A B1237 8.264 86.778 60.271 1.00 71.11 O
ATOM 5 O5' A B1237 9.872 88.662 60.214 1.00 73.27 O
ATOM 6 C5' A B1237 11.158 89.289 60.025 1.00 77.27 C
ATOM 7 C4' A B1237 11.089 90.736 60.441 1.00 79.98 C
ATOM 8 O4' A B1237 10.168 91.431 59.565 1.00 80.24 O
ATOM 9 C3' A B1237 10.533 90.968 61.837 1.00 82.99 C
ATOM 10 O3' A B1237 11.555 90.849 62.819 1.00 89.12 O
ATOM 11 C2' A B1237 9.978 92.383 61.742 1.00 81.53 C
ATOM 12 O2' A B1237 10.962 93.386 61.891 1.00 81.35 O
ATOM 13 C1' A B1237 9.445 92.400 60.306 1.00 80.78 C
ATOM 14 N9 A B1237 8.021 92.082 60.207 1.00 80.50 N
ATOM 15 C8 A B1237 7.425 90.844 60.211 1.00 80.44 C
ATOM 16 N7 A B1237 6.119 90.887 60.119 1.00 79.54 N
ATOM 17 C5 A B1237 5.834 92.242 60.047 1.00 79.98 C
ATOM 18 C6 A B1237 4.626 92.948 59.945 1.00 80.29 C
ATOM 19 N6 A B1237 3.429 92.362 59.908 1.00 80.45 N
ATOM 20 N1 A B1237 4.690 94.296 59.888 1.00 80.83 N
ATOM 21 C2 A B1237 5.893 94.883 59.941 1.00 80.62 C
ATOM 22 N3 A B1237 7.097 94.328 60.047 1.00 79.78 N
ATOM 23 C4 A B1237 6.997 92.989 60.095 1.00 80.20 C
ATOM 24 P U B1238 11.247 90.128 64.225 1.00 93.63 P
ATOM 25 OP1 U B1238 11.433 88.663 64.022 1.00 92.35 O
ATOM 26 OP2 U B1238 9.950 90.639 64.751 1.00 92.96 O
ATOM 27 O5' U B1238 12.430 90.646 65.165 1.00 98.73 O
TER
Atoms:
OP1: (9.805,95.997,66.438)
OP2: (9.707,93.635,65.441)
C3': (7.541,97.261,64.878)
C1': (6.445,96.507,62.943)
C5': (9.871,97.082,63.795)
O4': (7.792,96.801,62.594)
C8: (7.329,94.135,63.247)
O2': (5.655,98.534,63.996)
C6: (4.496,92.070,63.384)
C5: (5.524,93.019,63.310)
C4: (5.151,94.339,63.134)
P: (10.244,95.021,65.408)
C4': (8.431,97.535,63.674)
C2': (6.156,97.236,64.254)
C2: (3.015,93.824,63.109)
N1: (3.225,92.513,63.278)
N3: (3.899,94.814,63.025)
N6: (4.706,90.763,63.554)
N7: (6.905,92.903,63.377)
N9: (6.321,95.057,63.098)
O5': (9.933,95.653,63.978)
O3': (7.644,98.260,65.882)
OP2: (9.707,93.635,65.441)
C3': (7.541,97.261,64.878)
C1': (6.445,96.507,62.943)
C5': (9.871,97.082,63.795)
O4': (7.792,96.801,62.594)
C8: (7.329,94.135,63.247)
O2': (5.655,98.534,63.996)
C6: (4.496,92.070,63.384)
C5: (5.524,93.019,63.310)
C4: (5.151,94.339,63.134)
P: (10.244,95.021,65.408)
C4': (8.431,97.535,63.674)
C2': (6.156,97.236,64.254)
C2: (3.015,93.824,63.109)
N1: (3.225,92.513,63.278)
N3: (3.899,94.814,63.025)
N6: (4.706,90.763,63.554)
N7: (6.905,92.903,63.377)
N9: (6.321,95.057,63.098)
O5': (9.933,95.653,63.978)
O3': (7.644,98.260,65.882)
OP1: (10.793,86.319,60.221)
OP2: (8.264,86.778,60.271)
C3': (10.533,90.968,61.837)
C1': (9.445,92.400,60.306)
C5': (11.158,89.289,60.025)
O4': (10.168,91.431,59.565)
C8: (7.425,90.844,60.211)
O2': (10.962,93.386,61.891)
C6: (4.626,92.948,59.945)
C5: (5.834,92.242,60.047)
C4: (6.997,92.989,60.095)
P: (9.627,87.143,59.806)
C4': (11.089,90.736,60.441)
C2': (9.978,92.383,61.742)
C2: (5.893,94.883,59.941)
N1: (4.690,94.296,59.888)
N3: (7.097,94.328,60.047)
N6: (3.429,92.362,59.908)
N7: (6.119,90.887,60.119)
N9: (8.021,92.082,60.207)
O5': (9.872,88.662,60.214)
O3': (11.555,90.849,62.819)
OP2: (8.264,86.778,60.271)
C3': (10.533,90.968,61.837)
C1': (9.445,92.400,60.306)
C5': (11.158,89.289,60.025)
O4': (10.168,91.431,59.565)
C8: (7.425,90.844,60.211)
O2': (10.962,93.386,61.891)
C6: (4.626,92.948,59.945)
C5: (5.834,92.242,60.047)
C4: (6.997,92.989,60.095)
P: (9.627,87.143,59.806)
C4': (11.089,90.736,60.441)
C2': (9.978,92.383,61.742)
C2: (5.893,94.883,59.941)
N1: (4.690,94.296,59.888)
N3: (7.097,94.328,60.047)
N6: (3.429,92.362,59.908)
N7: (6.119,90.887,60.119)
N9: (8.021,92.082,60.207)
O5': (9.872,88.662,60.214)
O3': (11.555,90.849,62.819)
Image (generated by PyMOL):