ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2352:2351

Extra

PDB:
ATOM 1 O3' A A 351 -49.770 41.580 90.685 1.00 58.07 O
ATOM 2 P A A 352 -49.624 42.221 89.201 1.00 55.05 P
ATOM 3 OP1 A A 352 -50.944 42.753 88.819 1.00 55.50 O
ATOM 4 OP2 A A 352 -48.974 41.204 88.323 1.00 54.67 O
ATOM 5 O5' A A 352 -48.637 43.421 89.456 1.00 54.89 O
ATOM 6 C5' A A 352 -49.080 44.554 90.182 1.00 55.24 C
ATOM 7 C4' A A 352 -48.047 45.022 91.153 1.00 55.10 C
ATOM 8 O4' A A 352 -47.828 44.000 92.155 1.00 55.05 O
ATOM 9 C3' A A 352 -46.690 45.282 90.554 1.00 54.66 C
ATOM 10 O3' A A 352 -46.592 46.565 90.007 1.00 54.74 O
ATOM 11 C2' A A 352 -45.735 45.032 91.707 1.00 54.52 C
ATOM 12 O2' A A 352 -45.644 46.169 92.537 1.00 54.77 O
ATOM 13 C1' A A 352 -46.466 43.931 92.481 1.00 54.70 C
ATOM 14 N9 A A 352 -45.973 42.581 92.138 1.00 54.38 N
ATOM 15 C8 A A 352 -46.713 41.524 91.673 1.00 54.42 C
ATOM 16 N7 A A 352 -45.989 40.461 91.474 1.00 54.12 N
ATOM 17 C5 A A 352 -44.727 40.855 91.855 1.00 53.87 C
ATOM 18 C6 A A 352 -43.547 40.176 91.888 1.00 53.55 C
ATOM 19 N6 A A 352 -43.459 38.919 91.535 1.00 53.41 N
ATOM 20 N1 A A 352 -42.463 40.819 92.305 1.00 53.41 N
ATOM 21 C2 A A 352 -42.565 42.092 92.688 1.00 53.59 C
ATOM 22 N3 A A 352 -43.646 42.844 92.701 1.00 53.91 N
ATOM 23 C4 A A 352 -44.688 42.144 92.267 1.00 54.03 C
ATOM 24 P C A 353 -46.023 46.753 88.529 1.00 61.53 P
ATOM 25 OP1 C A 353 -45.717 48.197 88.362 1.00 61.65 O
ATOM 26 OP2 C A 353 -46.988 46.095 87.600 1.00 61.63 O
ATOM 27 O5' C A 353 -44.671 45.933 88.560 1.00 61.06 O
TER

ATOM 1 O3' C B 350 -55.092 42.225 94.281 1.00 58.31 O
ATOM 2 P A B 351 -54.474 41.746 92.874 1.00 59.99 P
ATOM 3 OP1 A B 351 -55.209 42.435 91.800 1.00 60.19 O
ATOM 4 OP2 A B 351 -54.446 40.271 92.891 1.00 59.86 O
ATOM 5 O5' A B 351 -53.009 42.323 92.918 1.00 59.52 O
ATOM 6 C5' A B 351 -52.008 41.725 93.688 1.00 59.23 C
ATOM 7 C4' A B 351 -50.820 41.396 92.853 1.00 58.68 C
ATOM 8 O4' A B 351 -50.442 40.053 93.169 1.00 58.50 O
ATOM 9 C3' A B 351 -51.046 41.415 91.343 1.00 58.55 C
ATOM 10 O3' A B 351 -49.770 41.580 90.685 1.00 58.07 O
ATOM 11 C2' A B 351 -51.543 40.002 91.110 1.00 58.57 C
ATOM 12 O2' A B 351 -51.388 39.550 89.792 1.00 58.34 O
ATOM 13 C1' A B 351 -50.663 39.219 92.069 1.00 58.36 C
ATOM 14 N9 A B 351 -51.264 38.011 92.579 1.00 58.56 N
ATOM 15 C8 A B 351 -52.469 37.913 93.137 1.00 59.05 C
ATOM 16 N7 A B 351 -52.717 36.713 93.551 1.00 59.15 N
ATOM 17 C5 A B 351 -51.593 35.991 93.265 1.00 58.70 C
ATOM 18 C6 A B 351 -51.262 34.638 93.454 1.00 58.61 C
ATOM 19 N6 A B 351 -52.075 33.741 94.029 1.00 58.97 N
ATOM 20 N1 A B 351 -50.004 34.246 93.083 1.00 58.15 N
ATOM 21 C2 A B 351 -49.183 35.164 92.527 1.00 57.82 C
ATOM 22 N3 A B 351 -49.417 36.455 92.288 1.00 57.88 N
ATOM 23 C4 A B 351 -50.659 36.800 92.686 1.00 58.34 C
ATOM 24 P A B 352 -49.624 42.221 89.201 1.00 55.05 P
ATOM 25 OP1 A B 352 -50.944 42.753 88.819 1.00 55.50 O
ATOM 26 OP2 A B 352 -48.974 41.204 88.323 1.00 54.67 O
ATOM 27 O5' A B 352 -48.637 43.421 89.456 1.00 54.89 O
TER

Atoms:
OP1: (-50.944,42.753,88.819)
OP2: (-48.974,41.204,88.323)
C3': (-46.690,45.282,90.554)
C1': (-46.466,43.931,92.481)
C5': (-49.080,44.554,90.182)
O4': (-47.828,44.000,92.155)
C8: (-46.713,41.524,91.673)
O2': (-45.644,46.169,92.537)
C6: (-43.547,40.176,91.888)
C5: (-44.727,40.855,91.855)
C4: (-44.688,42.144,92.267)
P: (-49.624,42.221,89.201)
C4': (-48.047,45.022,91.153)
C2': (-45.735,45.032,91.707)
C2: (-42.565,42.092,92.688)
N1: (-42.463,40.819,92.305)
N3: (-43.646,42.844,92.701)
N6: (-43.459,38.919,91.535)
N7: (-45.989,40.461,91.474)
N9: (-45.973,42.581,92.138)
O5': (-48.637,43.421,89.456)
O3': (-46.592,46.565,90.007)
OP1: (-55.209,42.435,91.800)
OP2: (-54.446,40.271,92.891)
C3': (-51.046,41.415,91.343)
C1': (-50.663,39.219,92.069)
C5': (-52.008,41.725,93.688)
O4': (-50.442,40.053,93.169)
C8: (-52.469,37.913,93.137)
O2': (-51.388,39.550,89.792)
C6: (-51.262,34.638,93.454)
C5: (-51.593,35.991,93.265)
C4: (-50.659,36.800,92.686)
P: (-54.474,41.746,92.874)
C4': (-50.820,41.396,92.853)
C2': (-51.543,40.002,91.110)
C2: (-49.183,35.164,92.527)
N1: (-50.004,34.246,93.083)
N3: (-49.417,36.455,92.288)
N6: (-52.075,33.741,94.029)
N7: (-52.717,36.713,93.551)
N9: (-51.264,38.011,92.579)
O5': (-53.009,42.323,92.918)
O3': (-49.770,41.580,90.685)
Image (generated by PyMOL):
PyMOL image
show in jmol