Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2205:A2204
Extra
PDB:
ATOM 1 O3' A A2204 -29.389 -16.158 56.355 1.00 65.54 O
ATOM 2 P A A2205 -29.608 -15.444 54.916 1.00 17.17 P
ATOM 3 OP1 A A2205 -28.285 -15.085 54.338 1.00 17.17 O
ATOM 4 OP2 A A2205 -30.617 -14.342 55.136 1.00 17.17 O
ATOM 5 O5' A A2205 -30.261 -16.621 54.069 1.00 17.17 O
ATOM 6 C5' A A2205 -30.853 -16.365 52.800 1.00 17.17 C
ATOM 7 C4' A A2205 -32.288 -16.851 52.741 1.00 17.17 C
ATOM 8 O4' A A2205 -32.414 -18.063 53.541 1.00 17.17 O
ATOM 9 C3' A A2205 -33.347 -15.864 53.259 1.00 17.17 C
ATOM 10 O3' A A2205 -34.412 -15.729 52.308 1.00 17.17 O
ATOM 11 C2' A A2205 -33.853 -16.513 54.562 1.00 17.17 C
ATOM 12 O2' A A2205 -35.217 -16.272 54.854 1.00 17.17 O
ATOM 13 C1' A A2205 -33.574 -18.001 54.333 1.00 17.17 C
ATOM 14 N9 A A2205 -33.322 -18.756 55.562 1.00 16.61 N
ATOM 15 C8 A A2205 -32.239 -18.612 56.370 1.00 16.61 C
ATOM 16 N7 A A2205 -32.240 -19.393 57.425 1.00 16.61 N
ATOM 17 C5 A A2205 -33.405 -20.108 57.313 1.00 16.61 C
ATOM 18 C6 A A2205 -33.964 -21.097 58.133 1.00 16.61 C
ATOM 19 N6 A A2205 -33.417 -21.556 59.257 1.00 16.61 N
ATOM 20 N1 A A2205 -35.136 -21.610 57.733 1.00 16.61 N
ATOM 21 C2 A A2205 -35.701 -21.153 56.601 1.00 16.61 C
ATOM 22 N3 A A2205 -35.268 -20.226 55.748 1.00 16.61 N
ATOM 23 C4 A A2205 -34.087 -19.732 56.164 1.00 16.61 C
ATOM 24 P U A2206 -34.094 -15.209 50.828 1.00 46.76 P
ATOM 25 OP1 U A2206 -33.796 -16.405 50.011 1.00 46.76 O
ATOM 26 OP2 U A2206 -33.070 -14.159 50.952 1.00 46.76 O
ATOM 27 O5' U A2206 -35.463 -14.563 50.347 1.00 46.76 O
TER
ATOM 1 O3' U B2203 -29.083 -14.805 60.187 1.00 17.33 O
ATOM 2 P A B2204 -27.634 -14.129 60.399 1.00 65.54 P
ATOM 3 OP1 A B2204 -27.537 -13.737 61.825 1.00 65.54 O
ATOM 4 OP2 A B2204 -27.486 -13.081 59.359 1.00 65.54 O
ATOM 5 O5' A B2204 -26.629 -15.326 60.103 1.00 65.54 O
ATOM 6 C5' A B2204 -26.876 -16.272 59.062 1.00 65.54 C
ATOM 7 C4' A B2204 -27.548 -15.645 57.863 1.00 65.54 C
ATOM 8 O4' A B2204 -26.579 -14.839 57.146 1.00 65.54 O
ATOM 9 C3' A B2204 -28.117 -16.640 56.857 1.00 65.54 C
ATOM 10 O3' A B2204 -29.389 -16.158 56.355 1.00 65.54 O
ATOM 11 C2' A B2204 -27.023 -16.748 55.785 1.00 65.54 C
ATOM 12 O2' A B2204 -27.474 -17.074 54.484 1.00 65.54 O
ATOM 13 C1' A B2204 -26.334 -15.370 55.851 1.00 65.54 C
ATOM 14 N9 A B2204 -24.865 -15.413 55.663 1.00 66.38 N
ATOM 15 C8 A B2204 -24.106 -14.645 54.785 1.00 66.38 C
ATOM 16 N7 A B2204 -22.802 -14.861 54.835 1.00 66.38 N
ATOM 17 C5 A B2204 -22.666 -15.831 55.830 1.00 66.38 C
ATOM 18 C6 A B2204 -21.529 -16.483 56.362 1.00 66.38 C
ATOM 19 N6 A B2204 -20.283 -16.241 55.936 1.00 66.38 N
ATOM 20 N1 A B2204 -21.730 -17.397 57.351 1.00 66.38 N
ATOM 21 C2 A B2204 -22.986 -17.636 57.772 1.00 66.38 C
ATOM 22 N3 A B2204 -24.132 -17.096 57.348 1.00 66.38 N
ATOM 23 C4 A B2204 -23.918 -16.181 56.362 1.00 66.38 C
ATOM 24 P A B2205 -29.608 -15.444 54.916 1.00 17.17 P
ATOM 25 OP1 A B2205 -28.285 -15.085 54.338 1.00 17.17 O
ATOM 26 OP2 A B2205 -30.617 -14.342 55.136 1.00 17.17 O
ATOM 27 O5' A B2205 -30.261 -16.621 54.069 1.00 17.17 O
TER
ATOM 2 P A A2205 -29.608 -15.444 54.916 1.00 17.17 P
ATOM 3 OP1 A A2205 -28.285 -15.085 54.338 1.00 17.17 O
ATOM 4 OP2 A A2205 -30.617 -14.342 55.136 1.00 17.17 O
ATOM 5 O5' A A2205 -30.261 -16.621 54.069 1.00 17.17 O
ATOM 6 C5' A A2205 -30.853 -16.365 52.800 1.00 17.17 C
ATOM 7 C4' A A2205 -32.288 -16.851 52.741 1.00 17.17 C
ATOM 8 O4' A A2205 -32.414 -18.063 53.541 1.00 17.17 O
ATOM 9 C3' A A2205 -33.347 -15.864 53.259 1.00 17.17 C
ATOM 10 O3' A A2205 -34.412 -15.729 52.308 1.00 17.17 O
ATOM 11 C2' A A2205 -33.853 -16.513 54.562 1.00 17.17 C
ATOM 12 O2' A A2205 -35.217 -16.272 54.854 1.00 17.17 O
ATOM 13 C1' A A2205 -33.574 -18.001 54.333 1.00 17.17 C
ATOM 14 N9 A A2205 -33.322 -18.756 55.562 1.00 16.61 N
ATOM 15 C8 A A2205 -32.239 -18.612 56.370 1.00 16.61 C
ATOM 16 N7 A A2205 -32.240 -19.393 57.425 1.00 16.61 N
ATOM 17 C5 A A2205 -33.405 -20.108 57.313 1.00 16.61 C
ATOM 18 C6 A A2205 -33.964 -21.097 58.133 1.00 16.61 C
ATOM 19 N6 A A2205 -33.417 -21.556 59.257 1.00 16.61 N
ATOM 20 N1 A A2205 -35.136 -21.610 57.733 1.00 16.61 N
ATOM 21 C2 A A2205 -35.701 -21.153 56.601 1.00 16.61 C
ATOM 22 N3 A A2205 -35.268 -20.226 55.748 1.00 16.61 N
ATOM 23 C4 A A2205 -34.087 -19.732 56.164 1.00 16.61 C
ATOM 24 P U A2206 -34.094 -15.209 50.828 1.00 46.76 P
ATOM 25 OP1 U A2206 -33.796 -16.405 50.011 1.00 46.76 O
ATOM 26 OP2 U A2206 -33.070 -14.159 50.952 1.00 46.76 O
ATOM 27 O5' U A2206 -35.463 -14.563 50.347 1.00 46.76 O
TER
ATOM 1 O3' U B2203 -29.083 -14.805 60.187 1.00 17.33 O
ATOM 2 P A B2204 -27.634 -14.129 60.399 1.00 65.54 P
ATOM 3 OP1 A B2204 -27.537 -13.737 61.825 1.00 65.54 O
ATOM 4 OP2 A B2204 -27.486 -13.081 59.359 1.00 65.54 O
ATOM 5 O5' A B2204 -26.629 -15.326 60.103 1.00 65.54 O
ATOM 6 C5' A B2204 -26.876 -16.272 59.062 1.00 65.54 C
ATOM 7 C4' A B2204 -27.548 -15.645 57.863 1.00 65.54 C
ATOM 8 O4' A B2204 -26.579 -14.839 57.146 1.00 65.54 O
ATOM 9 C3' A B2204 -28.117 -16.640 56.857 1.00 65.54 C
ATOM 10 O3' A B2204 -29.389 -16.158 56.355 1.00 65.54 O
ATOM 11 C2' A B2204 -27.023 -16.748 55.785 1.00 65.54 C
ATOM 12 O2' A B2204 -27.474 -17.074 54.484 1.00 65.54 O
ATOM 13 C1' A B2204 -26.334 -15.370 55.851 1.00 65.54 C
ATOM 14 N9 A B2204 -24.865 -15.413 55.663 1.00 66.38 N
ATOM 15 C8 A B2204 -24.106 -14.645 54.785 1.00 66.38 C
ATOM 16 N7 A B2204 -22.802 -14.861 54.835 1.00 66.38 N
ATOM 17 C5 A B2204 -22.666 -15.831 55.830 1.00 66.38 C
ATOM 18 C6 A B2204 -21.529 -16.483 56.362 1.00 66.38 C
ATOM 19 N6 A B2204 -20.283 -16.241 55.936 1.00 66.38 N
ATOM 20 N1 A B2204 -21.730 -17.397 57.351 1.00 66.38 N
ATOM 21 C2 A B2204 -22.986 -17.636 57.772 1.00 66.38 C
ATOM 22 N3 A B2204 -24.132 -17.096 57.348 1.00 66.38 N
ATOM 23 C4 A B2204 -23.918 -16.181 56.362 1.00 66.38 C
ATOM 24 P A B2205 -29.608 -15.444 54.916 1.00 17.17 P
ATOM 25 OP1 A B2205 -28.285 -15.085 54.338 1.00 17.17 O
ATOM 26 OP2 A B2205 -30.617 -14.342 55.136 1.00 17.17 O
ATOM 27 O5' A B2205 -30.261 -16.621 54.069 1.00 17.17 O
TER
Atoms:
OP1: (-28.285,-15.085,54.338)
OP2: (-30.617,-14.342,55.136)
C3': (-33.347,-15.864,53.259)
C1': (-33.574,-18.001,54.333)
C5': (-30.853,-16.365,52.800)
O4': (-32.414,-18.063,53.541)
C8: (-32.239,-18.612,56.370)
O2': (-35.217,-16.272,54.854)
C6: (-33.964,-21.097,58.133)
C5: (-33.405,-20.108,57.313)
C4: (-34.087,-19.732,56.164)
P: (-29.608,-15.444,54.916)
C4': (-32.288,-16.851,52.741)
C2': (-33.853,-16.513,54.562)
C2: (-35.701,-21.153,56.601)
N1: (-35.136,-21.610,57.733)
N3: (-35.268,-20.226,55.748)
N6: (-33.417,-21.556,59.257)
N7: (-32.240,-19.393,57.425)
N9: (-33.322,-18.756,55.562)
O5': (-30.261,-16.621,54.069)
O3': (-34.412,-15.729,52.308)
OP2: (-30.617,-14.342,55.136)
C3': (-33.347,-15.864,53.259)
C1': (-33.574,-18.001,54.333)
C5': (-30.853,-16.365,52.800)
O4': (-32.414,-18.063,53.541)
C8: (-32.239,-18.612,56.370)
O2': (-35.217,-16.272,54.854)
C6: (-33.964,-21.097,58.133)
C5: (-33.405,-20.108,57.313)
C4: (-34.087,-19.732,56.164)
P: (-29.608,-15.444,54.916)
C4': (-32.288,-16.851,52.741)
C2': (-33.853,-16.513,54.562)
C2: (-35.701,-21.153,56.601)
N1: (-35.136,-21.610,57.733)
N3: (-35.268,-20.226,55.748)
N6: (-33.417,-21.556,59.257)
N7: (-32.240,-19.393,57.425)
N9: (-33.322,-18.756,55.562)
O5': (-30.261,-16.621,54.069)
O3': (-34.412,-15.729,52.308)
OP1: (-27.537,-13.737,61.825)
OP2: (-27.486,-13.081,59.359)
C3': (-28.117,-16.640,56.857)
C1': (-26.334,-15.370,55.851)
C5': (-26.876,-16.272,59.062)
O4': (-26.579,-14.839,57.146)
C8: (-24.106,-14.645,54.785)
O2': (-27.474,-17.074,54.484)
C6: (-21.529,-16.483,56.362)
C5: (-22.666,-15.831,55.830)
C4: (-23.918,-16.181,56.362)
P: (-27.634,-14.129,60.399)
C4': (-27.548,-15.645,57.863)
C2': (-27.023,-16.748,55.785)
C2: (-22.986,-17.636,57.772)
N1: (-21.730,-17.397,57.351)
N3: (-24.132,-17.096,57.348)
N6: (-20.283,-16.241,55.936)
N7: (-22.802,-14.861,54.835)
N9: (-24.865,-15.413,55.663)
O5': (-26.629,-15.326,60.103)
O3': (-29.389,-16.158,56.355)
OP2: (-27.486,-13.081,59.359)
C3': (-28.117,-16.640,56.857)
C1': (-26.334,-15.370,55.851)
C5': (-26.876,-16.272,59.062)
O4': (-26.579,-14.839,57.146)
C8: (-24.106,-14.645,54.785)
O2': (-27.474,-17.074,54.484)
C6: (-21.529,-16.483,56.362)
C5: (-22.666,-15.831,55.830)
C4: (-23.918,-16.181,56.362)
P: (-27.634,-14.129,60.399)
C4': (-27.548,-15.645,57.863)
C2': (-27.023,-16.748,55.785)
C2: (-22.986,-17.636,57.772)
N1: (-21.730,-17.397,57.351)
N3: (-24.132,-17.096,57.348)
N6: (-20.283,-16.241,55.936)
N7: (-22.802,-14.861,54.835)
N9: (-24.865,-15.413,55.663)
O5': (-26.629,-15.326,60.103)
O3': (-29.389,-16.158,56.355)
Image (generated by PyMOL):