Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0300:0299
Extra
PDB:
ATOM 1 O3' C A 299 -5.758 145.498 43.380 1.00 65.08 O
ATOM 2 P U A 300 -4.912 146.311 44.468 1.00 66.18 P
ATOM 3 OP1 U A 300 -5.827 147.186 45.246 1.00 65.46 O
ATOM 4 OP2 U A 300 -3.763 146.916 43.741 1.00 65.91 O
ATOM 5 O5' U A 300 -4.374 145.166 45.439 1.00 66.80 O
ATOM 6 C5' U A 300 -5.284 144.426 46.284 1.00 66.38 C
ATOM 7 C4' U A 300 -4.528 143.426 47.132 1.00 66.22 C
ATOM 8 O4' U A 300 -3.971 142.387 46.285 1.00 66.83 O
ATOM 9 C3' U A 300 -3.328 143.980 47.881 1.00 65.74 C
ATOM 10 O3' U A 300 -3.695 144.614 49.091 1.00 64.87 O
ATOM 11 C2' U A 300 -2.488 142.736 48.106 1.00 66.27 C
ATOM 12 O2' U A 300 -2.976 141.949 49.174 1.00 66.72 O
ATOM 13 C1' U A 300 -2.697 142.000 46.779 1.00 66.66 C
ATOM 14 N1 U A 300 -1.685 142.354 45.769 1.00 66.56 N
ATOM 15 C2 U A 300 -0.479 141.674 45.789 1.00 66.70 C
ATOM 16 O2 U A 300 -0.221 140.798 46.595 1.00 67.18 O
ATOM 17 N3 U A 300 0.421 142.063 44.830 1.00 67.30 N
ATOM 18 C4 U A 300 0.247 143.044 43.876 1.00 66.88 C
ATOM 19 O4 U A 300 1.172 143.308 43.106 1.00 66.61 O
ATOM 20 C5 U A 300 -1.024 143.696 43.915 1.00 66.74 C
ATOM 21 C6 U A 300 -1.923 143.338 44.833 1.00 66.36 C
ATOM 22 P U A 301 -2.781 145.800 49.666 1.00 66.93 P
ATOM 23 OP1 U A 301 -3.436 146.359 50.882 1.00 65.94 O
ATOM 24 OP2 U A 301 -2.450 146.705 48.531 1.00 66.02 O
ATOM 25 O5' U A 301 -1.451 145.044 50.111 1.00 66.38 O
TER
ATOM 1 O3' U B 298 -4.436 145.908 37.395 1.00 68.61 O
ATOM 2 P C B 299 -3.955 146.732 38.685 1.00 69.93 P
ATOM 3 OP1 C B 299 -4.763 147.977 38.741 1.00 69.42 O
ATOM 4 OP2 C B 299 -2.477 146.827 38.639 1.00 72.32 O
ATOM 5 O5' C B 299 -4.363 145.796 39.908 1.00 67.64 O
ATOM 6 C5' C B 299 -5.746 145.509 40.177 1.00 66.15 C
ATOM 7 C4' C B 299 -5.871 144.416 41.210 1.00 64.96 C
ATOM 8 O4' C B 299 -5.348 143.170 40.683 1.00 65.18 O
ATOM 9 C3' C B 299 -5.085 144.630 42.487 1.00 64.45 C
ATOM 10 O3' C B 299 -5.758 145.498 43.380 1.00 65.08 O
ATOM 11 C2' C B 299 -4.959 143.213 43.024 1.00 64.48 C
ATOM 12 O2' C B 299 -6.147 142.751 43.636 1.00 64.22 O
ATOM 13 C1' C B 299 -4.733 142.433 41.730 1.00 64.57 C
ATOM 14 N1 C B 299 -3.305 142.251 41.397 1.00 65.09 N
ATOM 15 C2 C B 299 -2.653 141.085 41.825 1.00 63.61 C
ATOM 16 O2 C B 299 -3.279 140.257 42.504 1.00 64.01 O
ATOM 17 N3 C B 299 -1.356 140.893 41.487 1.00 62.81 N
ATOM 18 C4 C B 299 -0.712 141.806 40.757 1.00 62.70 C
ATOM 19 N4 C B 299 0.553 141.558 40.423 1.00 61.42 N
ATOM 20 C5 C B 299 -1.341 143.012 40.329 1.00 63.93 C
ATOM 21 C6 C B 299 -2.625 143.193 40.670 1.00 65.06 C
ATOM 22 P U B 300 -4.912 146.311 44.468 1.00 66.18 P
ATOM 23 OP1 U B 300 -5.827 147.186 45.246 1.00 65.46 O
ATOM 24 OP2 U B 300 -3.763 146.916 43.741 1.00 65.91 O
ATOM 25 O5' U B 300 -4.374 145.166 45.439 1.00 66.80 O
TER
ATOM 2 P U A 300 -4.912 146.311 44.468 1.00 66.18 P
ATOM 3 OP1 U A 300 -5.827 147.186 45.246 1.00 65.46 O
ATOM 4 OP2 U A 300 -3.763 146.916 43.741 1.00 65.91 O
ATOM 5 O5' U A 300 -4.374 145.166 45.439 1.00 66.80 O
ATOM 6 C5' U A 300 -5.284 144.426 46.284 1.00 66.38 C
ATOM 7 C4' U A 300 -4.528 143.426 47.132 1.00 66.22 C
ATOM 8 O4' U A 300 -3.971 142.387 46.285 1.00 66.83 O
ATOM 9 C3' U A 300 -3.328 143.980 47.881 1.00 65.74 C
ATOM 10 O3' U A 300 -3.695 144.614 49.091 1.00 64.87 O
ATOM 11 C2' U A 300 -2.488 142.736 48.106 1.00 66.27 C
ATOM 12 O2' U A 300 -2.976 141.949 49.174 1.00 66.72 O
ATOM 13 C1' U A 300 -2.697 142.000 46.779 1.00 66.66 C
ATOM 14 N1 U A 300 -1.685 142.354 45.769 1.00 66.56 N
ATOM 15 C2 U A 300 -0.479 141.674 45.789 1.00 66.70 C
ATOM 16 O2 U A 300 -0.221 140.798 46.595 1.00 67.18 O
ATOM 17 N3 U A 300 0.421 142.063 44.830 1.00 67.30 N
ATOM 18 C4 U A 300 0.247 143.044 43.876 1.00 66.88 C
ATOM 19 O4 U A 300 1.172 143.308 43.106 1.00 66.61 O
ATOM 20 C5 U A 300 -1.024 143.696 43.915 1.00 66.74 C
ATOM 21 C6 U A 300 -1.923 143.338 44.833 1.00 66.36 C
ATOM 22 P U A 301 -2.781 145.800 49.666 1.00 66.93 P
ATOM 23 OP1 U A 301 -3.436 146.359 50.882 1.00 65.94 O
ATOM 24 OP2 U A 301 -2.450 146.705 48.531 1.00 66.02 O
ATOM 25 O5' U A 301 -1.451 145.044 50.111 1.00 66.38 O
TER
ATOM 1 O3' U B 298 -4.436 145.908 37.395 1.00 68.61 O
ATOM 2 P C B 299 -3.955 146.732 38.685 1.00 69.93 P
ATOM 3 OP1 C B 299 -4.763 147.977 38.741 1.00 69.42 O
ATOM 4 OP2 C B 299 -2.477 146.827 38.639 1.00 72.32 O
ATOM 5 O5' C B 299 -4.363 145.796 39.908 1.00 67.64 O
ATOM 6 C5' C B 299 -5.746 145.509 40.177 1.00 66.15 C
ATOM 7 C4' C B 299 -5.871 144.416 41.210 1.00 64.96 C
ATOM 8 O4' C B 299 -5.348 143.170 40.683 1.00 65.18 O
ATOM 9 C3' C B 299 -5.085 144.630 42.487 1.00 64.45 C
ATOM 10 O3' C B 299 -5.758 145.498 43.380 1.00 65.08 O
ATOM 11 C2' C B 299 -4.959 143.213 43.024 1.00 64.48 C
ATOM 12 O2' C B 299 -6.147 142.751 43.636 1.00 64.22 O
ATOM 13 C1' C B 299 -4.733 142.433 41.730 1.00 64.57 C
ATOM 14 N1 C B 299 -3.305 142.251 41.397 1.00 65.09 N
ATOM 15 C2 C B 299 -2.653 141.085 41.825 1.00 63.61 C
ATOM 16 O2 C B 299 -3.279 140.257 42.504 1.00 64.01 O
ATOM 17 N3 C B 299 -1.356 140.893 41.487 1.00 62.81 N
ATOM 18 C4 C B 299 -0.712 141.806 40.757 1.00 62.70 C
ATOM 19 N4 C B 299 0.553 141.558 40.423 1.00 61.42 N
ATOM 20 C5 C B 299 -1.341 143.012 40.329 1.00 63.93 C
ATOM 21 C6 C B 299 -2.625 143.193 40.670 1.00 65.06 C
ATOM 22 P U B 300 -4.912 146.311 44.468 1.00 66.18 P
ATOM 23 OP1 U B 300 -5.827 147.186 45.246 1.00 65.46 O
ATOM 24 OP2 U B 300 -3.763 146.916 43.741 1.00 65.91 O
ATOM 25 O5' U B 300 -4.374 145.166 45.439 1.00 66.80 O
TER
Atoms:
C4: (0.247,143.044,43.876)
N3: (0.421,142.063,44.830)
OP1: (-5.827,147.186,45.246)
OP2: (-3.763,146.916,43.741)
C2: (-0.479,141.674,45.789)
C1': (-2.697,142.000,46.779)
C3': (-3.328,143.980,47.881)
O5': (-4.374,145.166,45.439)
O4': (-3.971,142.387,46.285)
C5': (-5.284,144.426,46.284)
P: (-4.912,146.311,44.468)
C4': (-4.528,143.426,47.132)
C2': (-2.488,142.736,48.106)
O2': (-2.976,141.949,49.174)
N1: (-1.685,142.354,45.769)
O4: (1.172,143.308,43.106)
O2: (-0.221,140.798,46.595)
C6: (-1.923,143.338,44.833)
C5: (-1.024,143.696,43.915)
O3': (-3.695,144.614,49.091)
N3: (0.421,142.063,44.830)
OP1: (-5.827,147.186,45.246)
OP2: (-3.763,146.916,43.741)
C2: (-0.479,141.674,45.789)
C1': (-2.697,142.000,46.779)
C3': (-3.328,143.980,47.881)
O5': (-4.374,145.166,45.439)
O4': (-3.971,142.387,46.285)
C5': (-5.284,144.426,46.284)
P: (-4.912,146.311,44.468)
C4': (-4.528,143.426,47.132)
C2': (-2.488,142.736,48.106)
O2': (-2.976,141.949,49.174)
N1: (-1.685,142.354,45.769)
O4: (1.172,143.308,43.106)
O2: (-0.221,140.798,46.595)
C6: (-1.923,143.338,44.833)
C5: (-1.024,143.696,43.915)
O3': (-3.695,144.614,49.091)
C2: (-2.653,141.085,41.825)
OP1: (-4.763,147.977,38.741)
OP2: (-2.477,146.827,38.639)
C4: (-0.712,141.806,40.757)
O5': (-4.363,145.796,39.908)
C3': (-5.085,144.630,42.487)
C1': (-4.733,142.433,41.730)
O4': (-5.348,143.170,40.683)
C5': (-5.746,145.509,40.177)
P: (-3.955,146.732,38.685)
O2: (-3.279,140.257,42.504)
C4': (-5.871,144.416,41.210)
C2': (-4.959,143.213,43.024)
O2': (-6.147,142.751,43.636)
N1: (-3.305,142.251,41.397)
N3: (-1.356,140.893,41.487)
N4: (0.553,141.558,40.423)
C6: (-2.625,143.193,40.670)
C5: (-1.341,143.012,40.329)
O3': (-5.758,145.498,43.380)
OP1: (-4.763,147.977,38.741)
OP2: (-2.477,146.827,38.639)
C4: (-0.712,141.806,40.757)
O5': (-4.363,145.796,39.908)
C3': (-5.085,144.630,42.487)
C1': (-4.733,142.433,41.730)
O4': (-5.348,143.170,40.683)
C5': (-5.746,145.509,40.177)
P: (-3.955,146.732,38.685)
O2: (-3.279,140.257,42.504)
C4': (-5.871,144.416,41.210)
C2': (-4.959,143.213,43.024)
O2': (-6.147,142.751,43.636)
N1: (-3.305,142.251,41.397)
N3: (-1.356,140.893,41.487)
N4: (0.553,141.558,40.423)
C6: (-2.625,143.193,40.670)
C5: (-1.341,143.012,40.329)
O3': (-5.758,145.498,43.380)
Image (generated by PyMOL):