ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3HHN:C130:C129

Extra

PDB:
ATOM 1 O3' A A 129 -18.374 50.085 10.633 1.00 76.24 O
ATOM 2 P A A 130 -19.241 51.218 11.358 1.00 85.89 P
ATOM 3 OP1 A A 130 -18.432 51.768 12.469 1.00 74.45 O
ATOM 4 OP2 A A 130 -20.587 50.674 11.629 1.00 76.39 O
ATOM 5 O5' A A 130 -19.387 52.340 10.226 1.00 83.05 O
ATOM 6 C5' A A 130 -18.285 53.167 9.875 1.00 76.48 C
ATOM 7 C4' A A 130 -18.511 53.787 8.509 1.00 79.16 C
ATOM 8 O4' A A 130 -18.240 52.799 7.482 1.00 87.16 O
ATOM 9 C3' A A 130 -19.936 54.257 8.249 1.00 79.64 C
ATOM 10 O3' A A 130 -20.098 55.604 8.670 1.00 79.35 O
ATOM 11 C2' A A 130 -20.033 54.126 6.734 1.00 82.99 C
ATOM 12 O2' A A 130 -19.402 55.194 6.056 1.00 77.49 O
ATOM 13 C1' A A 130 -19.263 52.830 6.505 1.00 85.73 C
ATOM 14 N9 A A 130 -20.090 51.634 6.649 1.00 83.36 N
ATOM 15 C8 A A 130 -20.176 50.810 7.738 1.00 80.06 C
ATOM 16 N7 A A 130 -21.009 49.808 7.580 1.00 76.75 N
ATOM 17 C5 A A 130 -21.503 49.988 6.298 1.00 81.74 C
ATOM 18 C6 A A 130 -22.430 49.260 5.525 1.00 83.22 C
ATOM 19 N6 A A 130 -23.046 48.157 5.960 1.00 85.74 N
ATOM 20 N1 A A 130 -22.702 49.710 4.282 1.00 82.91 N
ATOM 21 C2 A A 130 -22.086 50.816 3.849 1.00 80.95 C
ATOM 22 N3 A A 130 -21.197 51.581 4.481 1.00 85.73 N
ATOM 23 C4 A A 130 -20.948 51.108 5.712 1.00 81.09 C
ATOM 24 P U A 131 -21.456 56.067 9.379 1.00 82.60 P
ATOM 25 OP1 U A 131 -21.269 57.464 9.829 1.00 97.56 O
ATOM 26 OP2 U A 131 -21.849 55.026 10.355 1.00 66.26 O
ATOM 27 O5' U A 131 -22.512 56.050 8.179 1.00 74.92 O
TER

ATOM 1 O3' C B 128 -13.106 52.463 8.210 1.00 83.07 O
ATOM 2 P A B 129 -14.306 53.013 9.111 1.00 79.01 P
ATOM 3 OP1 A B 129 -15.291 53.625 8.189 1.00 67.24 O
ATOM 4 OP2 A B 129 -13.722 53.805 10.215 1.00 74.41 O
ATOM 5 O5' A B 129 -14.946 51.694 9.753 1.00 70.13 O
ATOM 6 C5' A B 129 -15.752 50.835 8.956 1.00 70.87 C
ATOM 7 C4' A B 129 -16.183 49.612 9.745 1.00 71.01 C
ATOM 8 O4' A B 129 -15.016 48.919 10.250 1.00 73.76 O
ATOM 9 C3' A B 129 -17.008 49.900 10.988 1.00 73.86 C
ATOM 10 O3' A B 129 -18.374 50.085 10.633 1.00 76.24 O
ATOM 11 C2' A B 129 -16.791 48.620 11.788 1.00 69.76 C
ATOM 12 O2' A B 129 -17.610 47.562 11.338 1.00 65.18 O
ATOM 13 C1' A B 129 -15.333 48.292 11.480 1.00 68.00 C
ATOM 14 N9 A B 129 -14.390 48.745 12.501 1.00 76.88 N
ATOM 15 C8 A B 129 -13.600 49.861 12.467 1.00 77.70 C
ATOM 16 N7 A B 129 -12.845 50.010 13.531 1.00 69.01 N
ATOM 17 C5 A B 129 -13.162 48.915 14.318 1.00 72.20 C
ATOM 18 C6 A B 129 -12.706 48.486 15.581 1.00 83.15 C
ATOM 19 N6 A B 129 -11.791 49.147 16.298 1.00 87.70 N
ATOM 20 N1 A B 129 -13.226 47.346 16.082 1.00 80.66 N
ATOM 21 C2 A B 129 -14.141 46.686 15.363 1.00 76.40 C
ATOM 22 N3 A B 129 -14.648 46.990 14.169 1.00 73.74 N
ATOM 23 C4 A B 129 -14.111 48.126 13.697 1.00 72.91 C
ATOM 24 P A B 130 -19.241 51.218 11.358 1.00 85.89 P
ATOM 25 OP1 A B 130 -18.432 51.768 12.469 1.00 74.45 O
ATOM 26 OP2 A B 130 -20.587 50.674 11.629 1.00 76.39 O
ATOM 27 O5' A B 130 -19.387 52.340 10.226 1.00 83.05 O
TER

Atoms:
OP1: (-18.432,51.768,12.469)
OP2: (-20.587,50.674,11.629)
C3': (-19.936,54.257,8.249)
C1': (-19.263,52.830,6.505)
C5': (-18.285,53.167,9.875)
O4': (-18.240,52.799,7.482)
C8: (-20.176,50.810,7.738)
O2': (-19.402,55.194,6.056)
C6: (-22.430,49.260,5.525)
C5: (-21.503,49.988,6.298)
C4: (-20.948,51.108,5.712)
P: (-19.241,51.218,11.358)
C4': (-18.511,53.787,8.509)
C2': (-20.033,54.126,6.734)
C2: (-22.086,50.816,3.849)
N1: (-22.702,49.710,4.282)
N3: (-21.197,51.581,4.481)
N6: (-23.046,48.157,5.960)
N7: (-21.009,49.808,7.580)
N9: (-20.090,51.634,6.649)
O5': (-19.387,52.340,10.226)
O3': (-20.098,55.604,8.670)
OP1: (-15.291,53.625,8.189)
OP2: (-13.722,53.805,10.215)
C3': (-17.008,49.900,10.988)
C1': (-15.333,48.292,11.480)
C5': (-15.752,50.835,8.956)
O4': (-15.016,48.919,10.250)
C8: (-13.600,49.861,12.467)
O2': (-17.610,47.562,11.338)
C6: (-12.706,48.486,15.581)
C5: (-13.162,48.915,14.318)
C4: (-14.111,48.126,13.697)
P: (-14.306,53.013,9.111)
C4': (-16.183,49.612,9.745)
C2': (-16.791,48.620,11.788)
C2: (-14.141,46.686,15.363)
N1: (-13.226,47.346,16.082)
N3: (-14.648,46.990,14.169)
N6: (-11.791,49.147,16.298)
N7: (-12.845,50.010,13.531)
N9: (-14.390,48.745,12.501)
O5': (-14.946,51.694,9.753)
O3': (-18.374,50.085,10.633)
Image (generated by PyMOL):
PyMOL image
show in jmol