Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0430:0429
Extra
PDB:
ATOM 1 O3' A A 429 53.890 128.020 36.991 1.00 56.07 O
ATOM 2 P A A 430 53.263 129.087 38.008 1.00 55.47 P
ATOM 3 OP1 A A 430 53.925 128.889 39.324 1.00 55.90 O
ATOM 4 OP2 A A 430 51.792 129.008 37.914 1.00 55.86 O
ATOM 5 O5' A A 430 53.701 130.486 37.394 1.00 55.78 O
ATOM 6 C5' A A 430 54.826 131.219 37.908 1.00 54.88 C
ATOM 7 C4' A A 430 55.494 131.967 36.787 1.00 55.17 C
ATOM 8 O4' A A 430 56.248 131.037 35.972 1.00 55.48 O
ATOM 9 C3' A A 430 54.519 132.607 35.820 1.00 55.26 C
ATOM 10 O3' A A 430 54.070 133.863 36.284 1.00 55.53 O
ATOM 11 C2' A A 430 55.333 132.701 34.545 1.00 56.62 C
ATOM 12 O2' A A 430 56.220 133.797 34.577 1.00 58.57 O
ATOM 13 C1' A A 430 56.127 131.392 34.603 1.00 57.08 C
ATOM 14 N9 A A 430 55.500 130.270 33.897 1.00 57.77 N
ATOM 15 C8 A A 430 55.087 129.078 34.438 1.00 58.72 C
ATOM 16 N7 A A 430 54.574 128.249 33.564 1.00 58.89 N
ATOM 17 C5 A A 430 54.652 128.939 32.366 1.00 58.30 C
ATOM 18 C6 A A 430 54.269 128.601 31.064 1.00 58.79 C
ATOM 19 N6 A A 430 53.718 127.434 30.739 1.00 60.47 N
ATOM 20 N1 A A 430 54.472 129.513 30.094 1.00 58.68 N
ATOM 21 C2 A A 430 55.024 130.682 30.425 1.00 58.24 C
ATOM 22 N3 A A 430 55.428 131.118 31.614 1.00 57.28 N
ATOM 23 C4 A A 430 55.213 130.187 32.555 1.00 57.68 C
ATOM 24 P C A 431 52.500 134.187 36.275 1.00 57.78 P
ATOM 25 OP1 C A 431 52.300 135.565 36.794 1.00 57.95 O
ATOM 26 OP2 C A 431 51.796 133.055 36.921 1.00 57.72 O
ATOM 27 O5' C A 431 52.129 134.176 34.729 1.00 57.56 O
TER
ATOM 1 O3' C B 428 56.343 121.985 37.824 1.00 50.79 O
ATOM 2 P A B 429 54.947 122.404 38.487 1.00 51.66 P
ATOM 3 OP1 A B 429 55.185 122.566 39.943 1.00 52.12 O
ATOM 4 OP2 A B 429 53.905 121.465 38.012 1.00 53.05 O
ATOM 5 O5' A B 429 54.648 123.843 37.890 1.00 53.48 O
ATOM 6 C5' A B 429 55.607 124.904 38.018 1.00 55.53 C
ATOM 7 C4' A B 429 55.246 126.028 37.088 1.00 56.15 C
ATOM 8 O4' A B 429 55.216 125.493 35.739 1.00 57.51 O
ATOM 9 C3' A B 429 53.874 126.644 37.327 1.00 56.70 C
ATOM 10 O3' A B 429 53.890 128.020 36.991 1.00 56.07 O
ATOM 11 C2' A B 429 52.974 125.858 36.382 1.00 56.94 C
ATOM 12 O2' A B 429 51.864 126.602 35.932 1.00 58.77 O
ATOM 13 C1' A B 429 53.907 125.573 35.213 1.00 57.66 C
ATOM 14 N9 A B 429 53.591 124.286 34.599 1.00 60.31 N
ATOM 15 C8 A B 429 53.604 123.042 35.190 1.00 61.21 C
ATOM 16 N7 A B 429 53.239 122.071 34.391 1.00 61.84 N
ATOM 17 C5 A B 429 52.969 122.715 33.190 1.00 62.37 C
ATOM 18 C6 A B 429 52.523 122.244 31.948 1.00 61.81 C
ATOM 19 N6 A B 429 52.250 120.961 31.700 1.00 62.08 N
ATOM 20 N1 A B 429 52.361 123.145 30.955 1.00 61.63 N
ATOM 21 C2 A B 429 52.632 124.430 31.205 1.00 61.57 C
ATOM 22 N3 A B 429 53.052 124.999 32.331 1.00 62.44 N
ATOM 23 C4 A B 429 53.199 124.077 33.300 1.00 62.18 C
ATOM 24 P A B 430 53.263 129.087 38.008 1.00 55.47 P
ATOM 25 OP1 A B 430 53.925 128.889 39.324 1.00 55.90 O
ATOM 26 OP2 A B 430 51.792 129.008 37.914 1.00 55.86 O
ATOM 27 O5' A B 430 53.701 130.486 37.394 1.00 55.78 O
TER
ATOM 2 P A A 430 53.263 129.087 38.008 1.00 55.47 P
ATOM 3 OP1 A A 430 53.925 128.889 39.324 1.00 55.90 O
ATOM 4 OP2 A A 430 51.792 129.008 37.914 1.00 55.86 O
ATOM 5 O5' A A 430 53.701 130.486 37.394 1.00 55.78 O
ATOM 6 C5' A A 430 54.826 131.219 37.908 1.00 54.88 C
ATOM 7 C4' A A 430 55.494 131.967 36.787 1.00 55.17 C
ATOM 8 O4' A A 430 56.248 131.037 35.972 1.00 55.48 O
ATOM 9 C3' A A 430 54.519 132.607 35.820 1.00 55.26 C
ATOM 10 O3' A A 430 54.070 133.863 36.284 1.00 55.53 O
ATOM 11 C2' A A 430 55.333 132.701 34.545 1.00 56.62 C
ATOM 12 O2' A A 430 56.220 133.797 34.577 1.00 58.57 O
ATOM 13 C1' A A 430 56.127 131.392 34.603 1.00 57.08 C
ATOM 14 N9 A A 430 55.500 130.270 33.897 1.00 57.77 N
ATOM 15 C8 A A 430 55.087 129.078 34.438 1.00 58.72 C
ATOM 16 N7 A A 430 54.574 128.249 33.564 1.00 58.89 N
ATOM 17 C5 A A 430 54.652 128.939 32.366 1.00 58.30 C
ATOM 18 C6 A A 430 54.269 128.601 31.064 1.00 58.79 C
ATOM 19 N6 A A 430 53.718 127.434 30.739 1.00 60.47 N
ATOM 20 N1 A A 430 54.472 129.513 30.094 1.00 58.68 N
ATOM 21 C2 A A 430 55.024 130.682 30.425 1.00 58.24 C
ATOM 22 N3 A A 430 55.428 131.118 31.614 1.00 57.28 N
ATOM 23 C4 A A 430 55.213 130.187 32.555 1.00 57.68 C
ATOM 24 P C A 431 52.500 134.187 36.275 1.00 57.78 P
ATOM 25 OP1 C A 431 52.300 135.565 36.794 1.00 57.95 O
ATOM 26 OP2 C A 431 51.796 133.055 36.921 1.00 57.72 O
ATOM 27 O5' C A 431 52.129 134.176 34.729 1.00 57.56 O
TER
ATOM 1 O3' C B 428 56.343 121.985 37.824 1.00 50.79 O
ATOM 2 P A B 429 54.947 122.404 38.487 1.00 51.66 P
ATOM 3 OP1 A B 429 55.185 122.566 39.943 1.00 52.12 O
ATOM 4 OP2 A B 429 53.905 121.465 38.012 1.00 53.05 O
ATOM 5 O5' A B 429 54.648 123.843 37.890 1.00 53.48 O
ATOM 6 C5' A B 429 55.607 124.904 38.018 1.00 55.53 C
ATOM 7 C4' A B 429 55.246 126.028 37.088 1.00 56.15 C
ATOM 8 O4' A B 429 55.216 125.493 35.739 1.00 57.51 O
ATOM 9 C3' A B 429 53.874 126.644 37.327 1.00 56.70 C
ATOM 10 O3' A B 429 53.890 128.020 36.991 1.00 56.07 O
ATOM 11 C2' A B 429 52.974 125.858 36.382 1.00 56.94 C
ATOM 12 O2' A B 429 51.864 126.602 35.932 1.00 58.77 O
ATOM 13 C1' A B 429 53.907 125.573 35.213 1.00 57.66 C
ATOM 14 N9 A B 429 53.591 124.286 34.599 1.00 60.31 N
ATOM 15 C8 A B 429 53.604 123.042 35.190 1.00 61.21 C
ATOM 16 N7 A B 429 53.239 122.071 34.391 1.00 61.84 N
ATOM 17 C5 A B 429 52.969 122.715 33.190 1.00 62.37 C
ATOM 18 C6 A B 429 52.523 122.244 31.948 1.00 61.81 C
ATOM 19 N6 A B 429 52.250 120.961 31.700 1.00 62.08 N
ATOM 20 N1 A B 429 52.361 123.145 30.955 1.00 61.63 N
ATOM 21 C2 A B 429 52.632 124.430 31.205 1.00 61.57 C
ATOM 22 N3 A B 429 53.052 124.999 32.331 1.00 62.44 N
ATOM 23 C4 A B 429 53.199 124.077 33.300 1.00 62.18 C
ATOM 24 P A B 430 53.263 129.087 38.008 1.00 55.47 P
ATOM 25 OP1 A B 430 53.925 128.889 39.324 1.00 55.90 O
ATOM 26 OP2 A B 430 51.792 129.008 37.914 1.00 55.86 O
ATOM 27 O5' A B 430 53.701 130.486 37.394 1.00 55.78 O
TER
Atoms:
OP1: (53.925,128.889,39.324)
OP2: (51.792,129.008,37.914)
C3': (54.519,132.607,35.820)
C1': (56.127,131.392,34.603)
C5': (54.826,131.219,37.908)
O4': (56.248,131.037,35.972)
C8: (55.087,129.078,34.438)
O2': (56.220,133.797,34.577)
C6: (54.269,128.601,31.064)
C5: (54.652,128.939,32.366)
C4: (55.213,130.187,32.555)
P: (53.263,129.087,38.008)
C4': (55.494,131.967,36.787)
C2': (55.333,132.701,34.545)
C2: (55.024,130.682,30.425)
N1: (54.472,129.513,30.094)
N3: (55.428,131.118,31.614)
N6: (53.718,127.434,30.739)
N7: (54.574,128.249,33.564)
N9: (55.500,130.270,33.897)
O5': (53.701,130.486,37.394)
O3': (54.070,133.863,36.284)
OP2: (51.792,129.008,37.914)
C3': (54.519,132.607,35.820)
C1': (56.127,131.392,34.603)
C5': (54.826,131.219,37.908)
O4': (56.248,131.037,35.972)
C8: (55.087,129.078,34.438)
O2': (56.220,133.797,34.577)
C6: (54.269,128.601,31.064)
C5: (54.652,128.939,32.366)
C4: (55.213,130.187,32.555)
P: (53.263,129.087,38.008)
C4': (55.494,131.967,36.787)
C2': (55.333,132.701,34.545)
C2: (55.024,130.682,30.425)
N1: (54.472,129.513,30.094)
N3: (55.428,131.118,31.614)
N6: (53.718,127.434,30.739)
N7: (54.574,128.249,33.564)
N9: (55.500,130.270,33.897)
O5': (53.701,130.486,37.394)
O3': (54.070,133.863,36.284)
OP1: (55.185,122.566,39.943)
OP2: (53.905,121.465,38.012)
C3': (53.874,126.644,37.327)
C1': (53.907,125.573,35.213)
C5': (55.607,124.904,38.018)
O4': (55.216,125.493,35.739)
C8: (53.604,123.042,35.190)
O2': (51.864,126.602,35.932)
C6: (52.523,122.244,31.948)
C5: (52.969,122.715,33.190)
C4: (53.199,124.077,33.300)
P: (54.947,122.404,38.487)
C4': (55.246,126.028,37.088)
C2': (52.974,125.858,36.382)
C2: (52.632,124.430,31.205)
N1: (52.361,123.145,30.955)
N3: (53.052,124.999,32.331)
N6: (52.250,120.961,31.700)
N7: (53.239,122.071,34.391)
N9: (53.591,124.286,34.599)
O5': (54.648,123.843,37.890)
O3': (53.890,128.020,36.991)
OP2: (53.905,121.465,38.012)
C3': (53.874,126.644,37.327)
C1': (53.907,125.573,35.213)
C5': (55.607,124.904,38.018)
O4': (55.216,125.493,35.739)
C8: (53.604,123.042,35.190)
O2': (51.864,126.602,35.932)
C6: (52.523,122.244,31.948)
C5: (52.969,122.715,33.190)
C4: (53.199,124.077,33.300)
P: (54.947,122.404,38.487)
C4': (55.246,126.028,37.088)
C2': (52.974,125.858,36.382)
C2: (52.632,124.430,31.205)
N1: (52.361,123.145,30.955)
N3: (53.052,124.999,32.331)
N6: (52.250,120.961,31.700)
N7: (53.239,122.071,34.391)
N9: (53.591,124.286,34.599)
O5': (54.648,123.843,37.890)
O3': (53.890,128.020,36.991)
Image (generated by PyMOL):