Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:A3:A2
Extra
PDB:
ATOM 1 O3' C A 2 7.869 -33.374 -6.978 1.00 96.84 O
ATOM 2 P U A 3 8.466 -33.131 -5.512 1.00 94.04 P
ATOM 3 OP1 U A 3 9.889 -33.535 -5.527 1.00 93.60 O
ATOM 4 OP2 U A 3 7.552 -33.738 -4.518 1.00 93.10 O
ATOM 5 O5' U A 3 8.363 -31.539 -5.373 1.00 93.30 O
ATOM 6 C5' U A 3 9.162 -30.692 -6.201 1.00 92.94 C
ATOM 7 C4' U A 3 8.961 -29.226 -5.868 1.00 91.81 C
ATOM 8 O4' U A 3 7.632 -28.808 -6.265 1.00 92.60 O
ATOM 9 C3' U A 3 9.017 -28.888 -4.387 1.00 89.58 C
ATOM 10 O3' U A 3 10.365 -28.807 -3.935 1.00 87.44 O
ATOM 11 C2' U A 3 8.255 -27.563 -4.342 1.00 90.37 C
ATOM 12 O2' U A 3 9.020 -26.437 -4.724 1.00 90.93 O
ATOM 13 C1' U A 3 7.148 -27.824 -5.364 1.00 92.06 C
ATOM 14 N1 U A 3 5.843 -28.275 -4.744 1.00 91.92 N
ATOM 15 C2 U A 3 4.964 -27.328 -4.233 1.00 92.06 C
ATOM 16 O2 U A 3 5.171 -26.126 -4.257 1.00 92.57 O
ATOM 17 N3 U A 3 3.804 -27.842 -3.690 1.00 91.67 N
ATOM 18 C4 U A 3 3.437 -29.177 -3.601 1.00 91.04 C
ATOM 19 O4 U A 3 2.368 -29.485 -3.087 1.00 90.24 O
ATOM 20 C5 U A 3 4.399 -30.104 -4.148 1.00 91.32 C
ATOM 21 C6 U A 3 5.536 -29.629 -4.683 1.00 91.72 C
ATOM 22 P C A 4 10.735 -29.314 -2.463 1.00 84.65 P
ATOM 23 OP1 C A 4 12.209 -29.399 -2.343 1.00 84.60 O
ATOM 24 OP2 C A 4 9.930 -30.514 -2.150 1.00 84.27 O
ATOM 25 O5' C A 4 10.211 -28.096 -1.574 1.00 83.58 O
TER
ATOM 1 O3' G B 1 3.558 -37.637 -7.268 1.00102.76 O
ATOM 2 P C B 2 4.389 -37.069 -6.025 1.00100.31 P
ATOM 3 OP1 C B 2 5.515 -37.996 -5.770 1.00 99.94 O
ATOM 4 OP2 C B 2 3.437 -36.740 -4.938 1.00 98.93 O
ATOM 5 O5' C B 2 4.973 -35.693 -6.593 1.00100.16 O
ATOM 6 C5' C B 2 5.811 -35.673 -7.747 1.00100.53 C
ATOM 7 C4' C B 2 5.981 -34.248 -8.239 1.00100.44 C
ATOM 8 O4' C B 2 4.698 -33.700 -8.637 1.00101.18 O
ATOM 9 C3' C B 2 6.465 -33.263 -7.187 1.00 98.45 C
ATOM 10 O3' C B 2 7.869 -33.374 -6.978 1.00 96.84 O
ATOM 11 C2' C B 2 6.048 -31.934 -7.810 1.00 99.61 C
ATOM 12 O2' C B 2 6.932 -31.483 -8.820 1.00100.84 O
ATOM 13 C1' C B 2 4.686 -32.300 -8.401 1.00100.71 C
ATOM 14 N1 C B 2 3.530 -31.921 -7.508 1.00 99.79 N
ATOM 15 C2 C B 2 3.028 -30.607 -7.537 1.00100.16 C
ATOM 16 O2 C B 2 3.529 -29.769 -8.297 1.00101.28 O
ATOM 17 N3 C B 2 1.986 -30.280 -6.726 1.00 99.52 N
ATOM 18 C4 C B 2 1.451 -31.193 -5.910 1.00 98.33 C
ATOM 19 N4 C B 2 0.429 -30.815 -5.136 1.00 97.40 N
ATOM 20 C5 C B 2 1.944 -32.534 -5.859 1.00 98.04 C
ATOM 21 C6 C B 2 2.971 -32.847 -6.664 1.00 98.77 C
ATOM 22 P U B 3 8.466 -33.131 -5.512 1.00 94.04 P
ATOM 23 OP1 U B 3 9.889 -33.535 -5.527 1.00 93.60 O
ATOM 24 OP2 U B 3 7.552 -33.738 -4.518 1.00 93.10 O
ATOM 25 O5' U B 3 8.363 -31.539 -5.373 1.00 93.30 O
TER
ATOM 2 P U A 3 8.466 -33.131 -5.512 1.00 94.04 P
ATOM 3 OP1 U A 3 9.889 -33.535 -5.527 1.00 93.60 O
ATOM 4 OP2 U A 3 7.552 -33.738 -4.518 1.00 93.10 O
ATOM 5 O5' U A 3 8.363 -31.539 -5.373 1.00 93.30 O
ATOM 6 C5' U A 3 9.162 -30.692 -6.201 1.00 92.94 C
ATOM 7 C4' U A 3 8.961 -29.226 -5.868 1.00 91.81 C
ATOM 8 O4' U A 3 7.632 -28.808 -6.265 1.00 92.60 O
ATOM 9 C3' U A 3 9.017 -28.888 -4.387 1.00 89.58 C
ATOM 10 O3' U A 3 10.365 -28.807 -3.935 1.00 87.44 O
ATOM 11 C2' U A 3 8.255 -27.563 -4.342 1.00 90.37 C
ATOM 12 O2' U A 3 9.020 -26.437 -4.724 1.00 90.93 O
ATOM 13 C1' U A 3 7.148 -27.824 -5.364 1.00 92.06 C
ATOM 14 N1 U A 3 5.843 -28.275 -4.744 1.00 91.92 N
ATOM 15 C2 U A 3 4.964 -27.328 -4.233 1.00 92.06 C
ATOM 16 O2 U A 3 5.171 -26.126 -4.257 1.00 92.57 O
ATOM 17 N3 U A 3 3.804 -27.842 -3.690 1.00 91.67 N
ATOM 18 C4 U A 3 3.437 -29.177 -3.601 1.00 91.04 C
ATOM 19 O4 U A 3 2.368 -29.485 -3.087 1.00 90.24 O
ATOM 20 C5 U A 3 4.399 -30.104 -4.148 1.00 91.32 C
ATOM 21 C6 U A 3 5.536 -29.629 -4.683 1.00 91.72 C
ATOM 22 P C A 4 10.735 -29.314 -2.463 1.00 84.65 P
ATOM 23 OP1 C A 4 12.209 -29.399 -2.343 1.00 84.60 O
ATOM 24 OP2 C A 4 9.930 -30.514 -2.150 1.00 84.27 O
ATOM 25 O5' C A 4 10.211 -28.096 -1.574 1.00 83.58 O
TER
ATOM 1 O3' G B 1 3.558 -37.637 -7.268 1.00102.76 O
ATOM 2 P C B 2 4.389 -37.069 -6.025 1.00100.31 P
ATOM 3 OP1 C B 2 5.515 -37.996 -5.770 1.00 99.94 O
ATOM 4 OP2 C B 2 3.437 -36.740 -4.938 1.00 98.93 O
ATOM 5 O5' C B 2 4.973 -35.693 -6.593 1.00100.16 O
ATOM 6 C5' C B 2 5.811 -35.673 -7.747 1.00100.53 C
ATOM 7 C4' C B 2 5.981 -34.248 -8.239 1.00100.44 C
ATOM 8 O4' C B 2 4.698 -33.700 -8.637 1.00101.18 O
ATOM 9 C3' C B 2 6.465 -33.263 -7.187 1.00 98.45 C
ATOM 10 O3' C B 2 7.869 -33.374 -6.978 1.00 96.84 O
ATOM 11 C2' C B 2 6.048 -31.934 -7.810 1.00 99.61 C
ATOM 12 O2' C B 2 6.932 -31.483 -8.820 1.00100.84 O
ATOM 13 C1' C B 2 4.686 -32.300 -8.401 1.00100.71 C
ATOM 14 N1 C B 2 3.530 -31.921 -7.508 1.00 99.79 N
ATOM 15 C2 C B 2 3.028 -30.607 -7.537 1.00100.16 C
ATOM 16 O2 C B 2 3.529 -29.769 -8.297 1.00101.28 O
ATOM 17 N3 C B 2 1.986 -30.280 -6.726 1.00 99.52 N
ATOM 18 C4 C B 2 1.451 -31.193 -5.910 1.00 98.33 C
ATOM 19 N4 C B 2 0.429 -30.815 -5.136 1.00 97.40 N
ATOM 20 C5 C B 2 1.944 -32.534 -5.859 1.00 98.04 C
ATOM 21 C6 C B 2 2.971 -32.847 -6.664 1.00 98.77 C
ATOM 22 P U B 3 8.466 -33.131 -5.512 1.00 94.04 P
ATOM 23 OP1 U B 3 9.889 -33.535 -5.527 1.00 93.60 O
ATOM 24 OP2 U B 3 7.552 -33.738 -4.518 1.00 93.10 O
ATOM 25 O5' U B 3 8.363 -31.539 -5.373 1.00 93.30 O
TER
Atoms:
C4: (3.437,-29.177,-3.601)
N3: (3.804,-27.842,-3.690)
OP1: (9.889,-33.535,-5.527)
OP2: (7.552,-33.738,-4.518)
C2: (4.964,-27.328,-4.233)
C1': (7.148,-27.824,-5.364)
C3': (9.017,-28.888,-4.387)
O5': (8.363,-31.539,-5.373)
O4': (7.632,-28.808,-6.265)
C5': (9.162,-30.692,-6.201)
P: (8.466,-33.131,-5.512)
C4': (8.961,-29.226,-5.868)
C2': (8.255,-27.563,-4.342)
O2': (9.020,-26.437,-4.724)
N1: (5.843,-28.275,-4.744)
O4: (2.368,-29.485,-3.087)
O2: (5.171,-26.126,-4.257)
C6: (5.536,-29.629,-4.683)
C5: (4.399,-30.104,-4.148)
O3': (10.365,-28.807,-3.935)
N3: (3.804,-27.842,-3.690)
OP1: (9.889,-33.535,-5.527)
OP2: (7.552,-33.738,-4.518)
C2: (4.964,-27.328,-4.233)
C1': (7.148,-27.824,-5.364)
C3': (9.017,-28.888,-4.387)
O5': (8.363,-31.539,-5.373)
O4': (7.632,-28.808,-6.265)
C5': (9.162,-30.692,-6.201)
P: (8.466,-33.131,-5.512)
C4': (8.961,-29.226,-5.868)
C2': (8.255,-27.563,-4.342)
O2': (9.020,-26.437,-4.724)
N1: (5.843,-28.275,-4.744)
O4: (2.368,-29.485,-3.087)
O2: (5.171,-26.126,-4.257)
C6: (5.536,-29.629,-4.683)
C5: (4.399,-30.104,-4.148)
O3': (10.365,-28.807,-3.935)
C2: (3.028,-30.607,-7.537)
OP1: (5.515,-37.996,-5.770)
OP2: (3.437,-36.740,-4.938)
C4: (1.451,-31.193,-5.910)
O5': (4.973,-35.693,-6.593)
C3': (6.465,-33.263,-7.187)
C1': (4.686,-32.300,-8.401)
O4': (4.698,-33.700,-8.637)
C5': (5.811,-35.673,-7.747)
P: (4.389,-37.069,-6.025)
O2: (3.529,-29.769,-8.297)
C4': (5.981,-34.248,-8.239)
C2': (6.048,-31.934,-7.810)
O2': (6.932,-31.483,-8.820)
N1: (3.530,-31.921,-7.508)
N3: (1.986,-30.280,-6.726)
N4: (0.429,-30.815,-5.136)
C6: (2.971,-32.847,-6.664)
C5: (1.944,-32.534,-5.859)
O3': (7.869,-33.374,-6.978)
OP1: (5.515,-37.996,-5.770)
OP2: (3.437,-36.740,-4.938)
C4: (1.451,-31.193,-5.910)
O5': (4.973,-35.693,-6.593)
C3': (6.465,-33.263,-7.187)
C1': (4.686,-32.300,-8.401)
O4': (4.698,-33.700,-8.637)
C5': (5.811,-35.673,-7.747)
P: (4.389,-37.069,-6.025)
O2: (3.529,-29.769,-8.297)
C4': (5.981,-34.248,-8.239)
C2': (6.048,-31.934,-7.810)
O2': (6.932,-31.483,-8.820)
N1: (3.530,-31.921,-7.508)
N3: (1.986,-30.280,-6.726)
N4: (0.429,-30.815,-5.136)
C6: (2.971,-32.847,-6.664)
C5: (1.944,-32.534,-5.859)
O3': (7.869,-33.374,-6.978)
Image (generated by PyMOL):