ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OTL:01239:01237

Extra

PDB:
ATOM 1 O3' U A1238 12.497 95.334 66.581 1.00100.69 O
ATOM 2 P A A1239 10.892 95.434 66.556 1.00100.58 P
ATOM 3 OP1 A A1239 10.482 96.477 67.529 1.00100.77 O
ATOM 4 OP2 A A1239 10.347 94.056 66.687 1.00101.08 O
ATOM 5 O5' A A1239 10.560 95.989 65.100 1.00 97.47 O
ATOM 6 C5' A A1239 10.583 97.401 64.824 1.00 93.14 C
ATOM 7 C4' A A1239 9.185 97.894 64.550 1.00 90.20 C
ATOM 8 O4' A A1239 8.635 97.140 63.439 1.00 89.76 O
ATOM 9 C3' A A1239 8.193 97.668 65.677 1.00 89.12 C
ATOM 10 O3' A A1239 8.256 98.712 66.640 1.00 89.14 O
ATOM 11 C2' A A1239 6.865 97.633 64.935 1.00 88.88 C
ATOM 12 O2' A A1239 6.398 98.917 64.573 1.00 88.78 O
ATOM 13 C1' A A1239 7.260 96.875 63.668 1.00 88.14 C
ATOM 14 N9 A A1239 7.102 95.429 63.809 1.00 86.03 N
ATOM 15 C8 A A1239 8.091 94.491 63.962 1.00 85.33 C
ATOM 16 N7 A A1239 7.646 93.265 64.074 1.00 84.53 N
ATOM 17 C5 A A1239 6.268 93.403 63.988 1.00 83.58 C
ATOM 18 C6 A A1239 5.222 92.470 64.041 1.00 82.24 C
ATOM 19 N6 A A1239 5.407 91.158 64.201 1.00 81.42 N
ATOM 20 N1 A A1239 3.961 92.936 63.923 1.00 82.07 N
ATOM 21 C2 A A1239 3.777 94.252 63.763 1.00 82.74 C
ATOM 22 N3 A A1239 4.679 95.228 63.699 1.00 83.30 N
ATOM 23 C4 A A1239 5.920 94.731 63.821 1.00 84.28 C
ATOM 24 P C A1240 7.572 98.513 68.083 1.00 89.89 P
ATOM 25 OP1 C A1240 7.528 99.844 68.744 1.00 90.60 O
ATOM 26 OP2 C A1240 8.203 97.364 68.790 1.00 89.26 O
ATOM 27 O5' C A1240 6.069 98.112 67.753 1.00 86.50 O
TER

ATOM 1 O3' C B1236 10.497 87.397 58.995 1.00 58.22 O
ATOM 2 P A B1237 10.459 87.371 60.589 1.00 58.37 P
ATOM 3 OP1 A B1237 11.612 86.573 61.055 1.00 58.58 O
ATOM 4 OP2 A B1237 9.086 86.996 61.000 1.00 60.78 O
ATOM 5 O5' A B1237 10.684 88.888 61.006 1.00 63.19 O
ATOM 6 C5' A B1237 11.948 89.537 60.790 1.00 67.89 C
ATOM 7 C4' A B1237 11.839 90.989 61.160 1.00 71.29 C
ATOM 8 O4' A B1237 10.902 91.633 60.265 1.00 71.02 O
ATOM 9 C3' A B1237 11.254 91.233 62.537 1.00 75.05 C
ATOM 10 O3' A B1237 12.245 91.125 63.545 1.00 83.02 O
ATOM 11 C2' A B1237 10.696 92.642 62.411 1.00 73.62 C
ATOM 12 O2' A B1237 11.666 93.656 62.541 1.00 73.89 O
ATOM 13 C1' A B1237 10.181 92.624 60.973 1.00 72.54 C
ATOM 14 N9 A B1237 8.764 92.298 60.905 1.00 72.02 N
ATOM 15 C8 A B1237 8.163 91.067 60.913 1.00 71.81 C
ATOM 16 N7 A B1237 6.855 91.121 60.859 1.00 72.05 N
ATOM 17 C5 A B1237 6.579 92.480 60.807 1.00 72.44 C
ATOM 18 C6 A B1237 5.373 93.206 60.743 1.00 72.99 C
ATOM 19 N6 A B1237 4.164 92.642 60.717 1.00 73.40 N
ATOM 20 N1 A B1237 5.454 94.554 60.707 1.00 73.62 N
ATOM 21 C2 A B1237 6.666 95.124 60.735 1.00 73.02 C
ATOM 22 N3 A B1237 7.865 94.552 60.796 1.00 71.76 N
ATOM 23 C4 A B1237 7.748 93.214 60.830 1.00 72.13 C
ATOM 24 P U B1238 11.929 90.305 64.892 1.00 89.82 P
ATOM 25 OP1 U B1238 12.305 88.881 64.643 1.00 88.24 O
ATOM 26 OP2 U B1238 10.545 90.639 65.335 1.00 88.57 O
ATOM 27 O5' U B1238 12.957 90.916 65.953 1.00 93.63 O
TER

Atoms:
OP1: (10.482,96.477,67.529)
OP2: (10.347,94.056,66.687)
C3': (8.193,97.668,65.677)
C1': (7.260,96.875,63.668)
C5': (10.583,97.401,64.824)
O4': (8.635,97.140,63.439)
C8: (8.091,94.491,63.962)
O2': (6.398,98.917,64.573)
C6: (5.222,92.470,64.041)
C5: (6.268,93.403,63.988)
C4: (5.920,94.731,63.821)
P: (10.892,95.434,66.556)
C4': (9.185,97.894,64.550)
C2': (6.865,97.633,64.935)
C2: (3.777,94.252,63.763)
N1: (3.961,92.936,63.923)
N3: (4.679,95.228,63.699)
N6: (5.407,91.158,64.201)
N7: (7.646,93.265,64.074)
N9: (7.102,95.429,63.809)
O5': (10.560,95.989,65.100)
O3': (8.256,98.712,66.640)
OP1: (11.612,86.573,61.055)
OP2: (9.086,86.996,61.000)
C3': (11.254,91.233,62.537)
C1': (10.181,92.624,60.973)
C5': (11.948,89.537,60.790)
O4': (10.902,91.633,60.265)
C8: (8.163,91.067,60.913)
O2': (11.666,93.656,62.541)
C6: (5.373,93.206,60.743)
C5: (6.579,92.480,60.807)
C4: (7.748,93.214,60.830)
P: (10.459,87.371,60.589)
C4': (11.839,90.989,61.160)
C2': (10.696,92.642,62.411)
C2: (6.666,95.124,60.735)
N1: (5.454,94.554,60.707)
N3: (7.865,94.552,60.796)
N6: (4.164,92.642,60.717)
N7: (6.855,91.121,60.859)
N9: (8.764,92.298,60.905)
O5': (10.684,88.888,61.006)
O3': (12.245,91.125,63.545)
Image (generated by PyMOL):
PyMOL image
show in jmol