ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCS:01239:01237

Extra

PDB:
ATOM 1 O3' U A1238 12.295 95.119 66.071 1.00110.67 O
ATOM 2 P A A1239 10.701 95.292 66.208 1.00109.94 P
ATOM 3 OP1 A A1239 10.466 96.410 67.154 1.00110.43 O
ATOM 4 OP2 A A1239 10.099 93.962 66.488 1.00110.95 O
ATOM 5 O5' A A1239 10.223 95.765 64.765 1.00106.55 O
ATOM 6 C5' A A1239 10.139 97.163 64.444 1.00103.36 C
ATOM 7 C4' A A1239 8.693 97.593 64.356 1.00101.01 C
ATOM 8 O4' A A1239 8.044 96.859 63.286 1.00100.66 O
ATOM 9 C3' A A1239 7.846 97.299 65.583 1.00 99.75 C
ATOM 10 O3' A A1239 7.981 98.310 66.578 1.00 99.56 O
ATOM 11 C2' A A1239 6.443 97.231 64.996 1.00 99.17 C
ATOM 12 O2' A A1239 5.886 98.506 64.746 1.00 98.13 O
ATOM 13 C1' A A1239 6.717 96.532 63.664 1.00 98.50 C
ATOM 14 N9 A A1239 6.632 95.076 63.762 1.00 95.85 N
ATOM 15 C8 A A1239 7.674 94.184 63.784 1.00 95.58 C
ATOM 16 N7 A A1239 7.297 92.934 63.876 1.00 95.05 N
ATOM 17 C5 A A1239 5.913 93.007 63.919 1.00 94.00 C
ATOM 18 C6 A A1239 4.921 92.021 64.015 1.00 93.29 C
ATOM 19 N6 A A1239 5.182 90.714 64.086 1.00 92.31 N
ATOM 20 N1 A A1239 3.634 92.427 64.034 1.00 93.55 N
ATOM 21 C2 A A1239 3.376 93.739 63.963 1.00 93.89 C
ATOM 22 N3 A A1239 4.223 94.761 63.870 1.00 93.97 N
ATOM 23 C4 A A1239 5.490 94.321 63.852 1.00 94.30 C
ATOM 24 P C A1240 7.370 98.071 68.049 1.00 99.66 P
ATOM 25 OP1 C A1240 7.425 99.368 68.772 1.00 99.80 O
ATOM 26 OP2 C A1240 7.994 96.863 68.656 1.00 98.53 O
ATOM 27 O5' C A1240 5.836 97.749 67.776 1.00 96.94 O
TER

ATOM 1 O3' C B1236 10.208 86.975 58.957 1.00 69.88 O
ATOM 2 P A B1237 10.179 86.923 60.553 1.00 71.84 P
ATOM 3 OP1 A B1237 11.333 86.120 61.012 1.00 71.04 O
ATOM 4 OP2 A B1237 8.808 86.552 60.978 1.00 73.21 O
ATOM 5 O5' A B1237 10.394 88.440 60.977 1.00 75.63 O
ATOM 6 C5' A B1237 11.655 89.097 60.783 1.00 78.96 C
ATOM 7 C4' A B1237 11.544 90.533 61.212 1.00 81.06 C
ATOM 8 O4' A B1237 10.625 91.218 60.328 1.00 80.65 O
ATOM 9 C3' A B1237 10.931 90.718 62.585 1.00 84.18 C
ATOM 10 O3' A B1237 11.896 90.542 63.611 1.00 92.38 O
ATOM 11 C2' A B1237 10.378 92.133 62.509 1.00 82.25 C
ATOM 12 O2' A B1237 11.353 93.131 62.702 1.00 82.93 O
ATOM 13 C1' A B1237 9.896 92.184 61.060 1.00 81.12 C
ATOM 14 N9 A B1237 8.476 91.885 60.927 1.00 80.24 N
ATOM 15 C8 A B1237 7.854 90.664 60.916 1.00 79.88 C
ATOM 16 N7 A B1237 6.551 90.738 60.813 1.00 79.69 N
ATOM 17 C5 A B1237 6.300 92.101 60.743 1.00 80.08 C
ATOM 18 C6 A B1237 5.109 92.844 60.635 1.00 80.82 C
ATOM 19 N6 A B1237 3.893 92.296 60.579 1.00 81.71 N
ATOM 20 N1 A B1237 5.212 94.189 60.592 1.00 80.58 N
ATOM 21 C2 A B1237 6.428 94.740 60.658 1.00 80.05 C
ATOM 22 N3 A B1237 7.615 94.151 60.764 1.00 79.35 N
ATOM 23 C4 A B1237 7.478 92.816 60.803 1.00 79.82 C
ATOM 24 P U B1238 11.518 89.685 64.921 1.00 99.14 P
ATOM 25 OP1 U B1238 12.236 88.382 64.847 1.00 98.13 O
ATOM 26 OP2 U B1238 10.037 89.702 65.061 1.00 99.74 O
ATOM 27 O5' U B1238 12.133 90.534 66.123 1.00102.58 O
TER

Atoms:
OP1: (10.466,96.410,67.154)
OP2: (10.099,93.962,66.488)
C3': (7.846,97.299,65.583)
C1': (6.717,96.532,63.664)
C5': (10.139,97.163,64.444)
O4': (8.044,96.859,63.286)
C8: (7.674,94.184,63.784)
O2': (5.886,98.506,64.746)
C6: (4.921,92.021,64.015)
C5: (5.913,93.007,63.919)
C4: (5.490,94.321,63.852)
P: (10.701,95.292,66.208)
C4': (8.693,97.593,64.356)
C2': (6.443,97.231,64.996)
C2: (3.376,93.739,63.963)
N1: (3.634,92.427,64.034)
N3: (4.223,94.761,63.870)
N6: (5.182,90.714,64.086)
N7: (7.297,92.934,63.876)
N9: (6.632,95.076,63.762)
O5': (10.223,95.765,64.765)
O3': (7.981,98.310,66.578)
OP1: (11.333,86.120,61.012)
OP2: (8.808,86.552,60.978)
C3': (10.931,90.718,62.585)
C1': (9.896,92.184,61.060)
C5': (11.655,89.097,60.783)
O4': (10.625,91.218,60.328)
C8: (7.854,90.664,60.916)
O2': (11.353,93.131,62.702)
C6: (5.109,92.844,60.635)
C5: (6.300,92.101,60.743)
C4: (7.478,92.816,60.803)
P: (10.179,86.923,60.553)
C4': (11.544,90.533,61.212)
C2': (10.378,92.133,62.509)
C2: (6.428,94.740,60.658)
N1: (5.212,94.189,60.592)
N3: (7.615,94.151,60.764)
N6: (3.893,92.296,60.579)
N7: (6.551,90.738,60.813)
N9: (8.476,91.885,60.927)
O5': (10.394,88.440,60.977)
O3': (11.896,90.542,63.611)
Image (generated by PyMOL):
PyMOL image
show in jmol