ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1508:A1507

Extra

PDB:
ATOM 1 O3' A A1507 41.730 -12.840 -20.895 1.00 30.80 O
ATOM 2 P A A1508 41.525 -12.283 -22.386 1.00 38.45 P
ATOM 3 OP1 A A1508 42.101 -13.285 -23.337 1.00 24.16 O
ATOM 4 OP2 A A1508 42.059 -10.911 -22.413 1.00 38.67 O
ATOM 5 O5' A A1508 39.921 -12.251 -22.510 1.00 44.01 O
ATOM 6 C5' A A1508 39.126 -13.381 -22.134 1.00 38.54 C
ATOM 7 C4' A A1508 37.646 -13.141 -22.343 1.00 40.83 C
ATOM 8 O4' A A1508 37.155 -12.255 -21.297 1.00 39.36 O
ATOM 9 C3' A A1508 37.272 -12.477 -23.658 1.00 39.79 C
ATOM 10 O3' A A1508 35.920 -12.841 -23.988 1.00 41.37 O
ATOM 11 C2' A A1508 37.347 -11.001 -23.273 1.00 33.77 C
ATOM 12 O2' A A1508 36.647 -10.130 -24.115 1.00 33.01 O
ATOM 13 C1' A A1508 36.761 -11.022 -21.864 1.00 41.26 C
ATOM 14 N9 A A1508 37.251 -9.949 -20.993 1.00 43.42 N
ATOM 15 C8 A A1508 38.332 -9.943 -20.152 1.00 39.73 C
ATOM 16 N7 A A1508 38.491 -8.831 -19.475 1.00 32.90 N
ATOM 17 C5 A A1508 37.440 -8.057 -19.898 1.00 39.17 C
ATOM 18 C6 A A1508 37.027 -6.769 -19.566 1.00 46.18 C
ATOM 19 N6 A A1508 37.662 -5.989 -18.695 1.00 50.05 N
ATOM 20 N1 A A1508 35.914 -6.293 -20.161 1.00 45.38 N
ATOM 21 C2 A A1508 35.277 -7.070 -21.034 1.00 44.61 C
ATOM 22 N3 A A1508 35.566 -8.299 -21.425 1.00 44.48 N
ATOM 23 C4 A A1508 36.669 -8.730 -20.815 1.00 42.46 C
ATOM 24 P G A1509 35.372 -12.805 -25.514 1.00 36.54 P
ATOM 25 OP1 G A1509 36.527 -12.600 -26.420 1.00 32.17 O
ATOM 26 OP2 G A1509 34.269 -11.823 -25.534 1.00 45.16 O
ATOM 27 O5' G A1509 34.792 -14.252 -25.721 1.00 28.55 O
TER

ATOM 1 O3' C B1506 41.977 -9.877 -15.422 1.00 31.56 O
ATOM 2 P A B1507 43.332 -9.624 -16.226 1.00 31.90 P
ATOM 3 OP1 A B1507 44.426 -9.613 -15.228 1.00 41.98 O
ATOM 4 OP2 A B1507 43.140 -8.435 -17.077 1.00 30.65 O
ATOM 5 O5' A B1507 43.426 -10.911 -17.134 1.00 32.07 O
ATOM 6 C5' A B1507 43.681 -10.794 -18.521 1.00 34.37 C
ATOM 7 C4' A B1507 43.230 -12.018 -19.260 1.00 32.73 C
ATOM 8 O4' A B1507 43.231 -13.146 -18.350 1.00 31.78 O
ATOM 9 C3' A B1507 41.828 -11.941 -19.801 1.00 30.78 C
ATOM 10 O3' A B1507 41.730 -12.840 -20.895 1.00 30.80 O
ATOM 11 C2' A B1507 41.017 -12.474 -18.636 1.00 32.90 C
ATOM 12 O2' A B1507 39.744 -12.933 -18.990 1.00 36.86 O
ATOM 13 C1' A B1507 41.906 -13.606 -18.162 1.00 32.41 C
ATOM 14 N9 A B1507 41.737 -13.954 -16.751 1.00 26.56 N
ATOM 15 C8 A B1507 41.610 -13.117 -15.700 1.00 26.75 C
ATOM 16 N7 A B1507 41.513 -13.726 -14.549 1.00 19.48 N
ATOM 17 C5 A B1507 41.579 -15.051 -14.857 1.00 19.97 C
ATOM 18 C6 A B1507 41.509 -16.198 -14.050 1.00 30.91 C
ATOM 19 N6 A B1507 41.359 -16.137 -12.728 1.00 34.22 N
ATOM 20 N1 A B1507 41.588 -17.408 -14.632 1.00 23.75 N
ATOM 21 C2 A B1507 41.730 -17.400 -15.961 1.00 35.38 C
ATOM 22 N3 A B1507 41.808 -16.389 -16.833 1.00 33.73 N
ATOM 23 C4 A B1507 41.717 -15.212 -16.206 1.00 27.73 C
ATOM 24 P A B1508 41.525 -12.283 -22.386 1.00 38.45 P
ATOM 25 OP1 A B1508 42.101 -13.285 -23.337 1.00 24.16 O
ATOM 26 OP2 A B1508 42.059 -10.911 -22.413 1.00 38.67 O
ATOM 27 O5' A B1508 39.921 -12.251 -22.510 1.00 44.01 O
TER

Atoms:
OP1: (42.101,-13.285,-23.337)
OP2: (42.059,-10.911,-22.413)
C3': (37.272,-12.477,-23.658)
C1': (36.761,-11.022,-21.864)
C5': (39.126,-13.381,-22.134)
O4': (37.155,-12.255,-21.297)
C8: (38.332,-9.943,-20.152)
O2': (36.647,-10.130,-24.115)
C6: (37.027,-6.769,-19.566)
C5: (37.440,-8.057,-19.898)
C4: (36.669,-8.730,-20.815)
P: (41.525,-12.283,-22.386)
C4': (37.646,-13.141,-22.343)
C2': (37.347,-11.001,-23.273)
C2: (35.277,-7.070,-21.034)
N1: (35.914,-6.293,-20.161)
N3: (35.566,-8.299,-21.425)
N6: (37.662,-5.989,-18.695)
N7: (38.491,-8.831,-19.475)
N9: (37.251,-9.949,-20.993)
O5': (39.921,-12.251,-22.510)
O3': (35.920,-12.841,-23.988)
OP1: (44.426,-9.613,-15.228)
OP2: (43.140,-8.435,-17.077)
C3': (41.828,-11.941,-19.801)
C1': (41.906,-13.606,-18.162)
C5': (43.681,-10.794,-18.521)
O4': (43.231,-13.146,-18.350)
C8: (41.610,-13.117,-15.700)
O2': (39.744,-12.933,-18.990)
C6: (41.509,-16.198,-14.050)
C5: (41.579,-15.051,-14.857)
C4: (41.717,-15.212,-16.206)
P: (43.332,-9.624,-16.226)
C4': (43.230,-12.018,-19.260)
C2': (41.017,-12.474,-18.636)
C2: (41.730,-17.400,-15.961)
N1: (41.588,-17.408,-14.632)
N3: (41.808,-16.389,-16.833)
N6: (41.359,-16.137,-12.728)
N7: (41.513,-13.726,-14.549)
N9: (41.737,-13.954,-16.751)
O5': (43.426,-10.911,-17.134)
O3': (41.730,-12.840,-20.895)
Image (generated by PyMOL):
PyMOL image
show in jmol