Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CPW:01239:01237
Extra
PDB:
ATOM 1 O3' U A1238 11.919 94.300 66.326 1.00106.47 O
ATOM 2 P A A1239 10.342 94.423 66.034 1.00106.89 P
ATOM 3 OP1 A A1239 9.784 95.320 67.078 1.00107.25 O
ATOM 4 OP2 A A1239 9.787 93.049 65.874 1.00107.00 O
ATOM 5 O5' A A1239 10.241 95.170 64.630 1.00103.55 O
ATOM 6 C5' A A1239 10.169 96.605 64.552 1.00100.29 C
ATOM 7 C4' A A1239 8.738 97.049 64.346 1.00 98.53 C
ATOM 8 O4' A A1239 8.167 96.291 63.246 1.00 98.20 O
ATOM 9 C3' A A1239 7.781 96.807 65.506 1.00 97.85 C
ATOM 10 O3' A A1239 7.813 97.868 66.455 1.00 97.74 O
ATOM 11 C2' A A1239 6.427 96.718 64.813 1.00 97.67 C
ATOM 12 O2' A A1239 5.862 97.986 64.536 1.00 96.22 O
ATOM 13 C1' A A1239 6.796 96.019 63.504 1.00 97.25 C
ATOM 14 N9 A A1239 6.621 94.565 63.586 1.00 96.11 N
ATOM 15 C8 A A1239 7.601 93.607 63.703 1.00 95.69 C
ATOM 16 N7 A A1239 7.140 92.383 63.768 1.00 95.19 N
ATOM 17 C5 A A1239 5.764 92.541 63.690 1.00 94.63 C
ATOM 18 C6 A A1239 4.709 91.617 63.704 1.00 94.27 C
ATOM 19 N6 A A1239 4.882 90.297 63.813 1.00 93.39 N
ATOM 20 N1 A A1239 3.452 92.100 63.602 1.00 94.82 N
ATOM 21 C2 A A1239 3.280 93.424 63.496 1.00 95.27 C
ATOM 22 N3 A A1239 4.192 94.392 63.473 1.00 94.95 N
ATOM 23 C4 A A1239 5.430 93.878 63.574 1.00 94.97 C
ATOM 24 P C A1240 7.162 97.656 67.914 1.00 97.24 P
ATOM 25 OP1 C A1240 7.284 98.939 68.652 1.00 96.97 O
ATOM 26 OP2 C A1240 7.701 96.406 68.518 1.00 96.79 O
ATOM 27 O5' C A1240 5.617 97.415 67.621 1.00 95.07 O
TER
ATOM 1 O3' C B1236 9.940 86.596 58.709 1.00 66.64 O
ATOM 2 P A B1237 10.008 86.579 60.312 1.00 66.12 P
ATOM 3 OP1 A B1237 11.219 85.817 60.693 1.00 65.77 O
ATOM 4 OP2 A B1237 8.686 86.164 60.832 1.00 68.35 O
ATOM 5 O5' A B1237 10.225 88.107 60.693 1.00 69.28 O
ATOM 6 C5' A B1237 11.522 88.720 60.578 1.00 73.80 C
ATOM 7 C4' A B1237 11.454 90.159 61.014 1.00 76.97 C
ATOM 8 O4' A B1237 10.572 90.878 60.121 1.00 77.33 O
ATOM 9 C3' A B1237 10.871 90.386 62.397 1.00 79.81 C
ATOM 10 O3' A B1237 11.862 90.266 63.397 1.00 85.78 O
ATOM 11 C2' A B1237 10.325 91.803 62.304 1.00 78.53 C
ATOM 12 O2' A B1237 11.317 92.785 62.526 1.00 77.81 O
ATOM 13 C1' A B1237 9.851 91.856 60.849 1.00 78.06 C
ATOM 14 N9 A B1237 8.427 91.562 60.712 1.00 78.04 N
ATOM 15 C8 A B1237 7.811 90.334 60.736 1.00 78.72 C
ATOM 16 N7 A B1237 6.508 90.393 60.623 1.00 78.57 N
ATOM 17 C5 A B1237 6.246 91.750 60.509 1.00 78.80 C
ATOM 18 C6 A B1237 5.049 92.474 60.378 1.00 79.33 C
ATOM 19 N6 A B1237 3.838 91.908 60.348 1.00 79.34 N
ATOM 20 N1 A B1237 5.137 93.818 60.286 1.00 79.87 N
ATOM 21 C2 A B1237 6.350 94.386 60.335 1.00 79.15 C
ATOM 22 N3 A B1237 7.543 93.816 60.467 1.00 78.39 N
ATOM 23 C4 A B1237 7.421 92.481 60.551 1.00 78.28 C
ATOM 24 P U B1238 11.481 89.641 64.826 1.00 91.05 P
ATOM 25 OP1 U B1238 11.579 88.160 64.690 1.00 89.56 O
ATOM 26 OP2 U B1238 10.207 90.257 65.300 1.00 89.28 O
ATOM 27 O5' U B1238 12.691 90.124 65.750 1.00 95.22 O
TER
ATOM 2 P A A1239 10.342 94.423 66.034 1.00106.89 P
ATOM 3 OP1 A A1239 9.784 95.320 67.078 1.00107.25 O
ATOM 4 OP2 A A1239 9.787 93.049 65.874 1.00107.00 O
ATOM 5 O5' A A1239 10.241 95.170 64.630 1.00103.55 O
ATOM 6 C5' A A1239 10.169 96.605 64.552 1.00100.29 C
ATOM 7 C4' A A1239 8.738 97.049 64.346 1.00 98.53 C
ATOM 8 O4' A A1239 8.167 96.291 63.246 1.00 98.20 O
ATOM 9 C3' A A1239 7.781 96.807 65.506 1.00 97.85 C
ATOM 10 O3' A A1239 7.813 97.868 66.455 1.00 97.74 O
ATOM 11 C2' A A1239 6.427 96.718 64.813 1.00 97.67 C
ATOM 12 O2' A A1239 5.862 97.986 64.536 1.00 96.22 O
ATOM 13 C1' A A1239 6.796 96.019 63.504 1.00 97.25 C
ATOM 14 N9 A A1239 6.621 94.565 63.586 1.00 96.11 N
ATOM 15 C8 A A1239 7.601 93.607 63.703 1.00 95.69 C
ATOM 16 N7 A A1239 7.140 92.383 63.768 1.00 95.19 N
ATOM 17 C5 A A1239 5.764 92.541 63.690 1.00 94.63 C
ATOM 18 C6 A A1239 4.709 91.617 63.704 1.00 94.27 C
ATOM 19 N6 A A1239 4.882 90.297 63.813 1.00 93.39 N
ATOM 20 N1 A A1239 3.452 92.100 63.602 1.00 94.82 N
ATOM 21 C2 A A1239 3.280 93.424 63.496 1.00 95.27 C
ATOM 22 N3 A A1239 4.192 94.392 63.473 1.00 94.95 N
ATOM 23 C4 A A1239 5.430 93.878 63.574 1.00 94.97 C
ATOM 24 P C A1240 7.162 97.656 67.914 1.00 97.24 P
ATOM 25 OP1 C A1240 7.284 98.939 68.652 1.00 96.97 O
ATOM 26 OP2 C A1240 7.701 96.406 68.518 1.00 96.79 O
ATOM 27 O5' C A1240 5.617 97.415 67.621 1.00 95.07 O
TER
ATOM 1 O3' C B1236 9.940 86.596 58.709 1.00 66.64 O
ATOM 2 P A B1237 10.008 86.579 60.312 1.00 66.12 P
ATOM 3 OP1 A B1237 11.219 85.817 60.693 1.00 65.77 O
ATOM 4 OP2 A B1237 8.686 86.164 60.832 1.00 68.35 O
ATOM 5 O5' A B1237 10.225 88.107 60.693 1.00 69.28 O
ATOM 6 C5' A B1237 11.522 88.720 60.578 1.00 73.80 C
ATOM 7 C4' A B1237 11.454 90.159 61.014 1.00 76.97 C
ATOM 8 O4' A B1237 10.572 90.878 60.121 1.00 77.33 O
ATOM 9 C3' A B1237 10.871 90.386 62.397 1.00 79.81 C
ATOM 10 O3' A B1237 11.862 90.266 63.397 1.00 85.78 O
ATOM 11 C2' A B1237 10.325 91.803 62.304 1.00 78.53 C
ATOM 12 O2' A B1237 11.317 92.785 62.526 1.00 77.81 O
ATOM 13 C1' A B1237 9.851 91.856 60.849 1.00 78.06 C
ATOM 14 N9 A B1237 8.427 91.562 60.712 1.00 78.04 N
ATOM 15 C8 A B1237 7.811 90.334 60.736 1.00 78.72 C
ATOM 16 N7 A B1237 6.508 90.393 60.623 1.00 78.57 N
ATOM 17 C5 A B1237 6.246 91.750 60.509 1.00 78.80 C
ATOM 18 C6 A B1237 5.049 92.474 60.378 1.00 79.33 C
ATOM 19 N6 A B1237 3.838 91.908 60.348 1.00 79.34 N
ATOM 20 N1 A B1237 5.137 93.818 60.286 1.00 79.87 N
ATOM 21 C2 A B1237 6.350 94.386 60.335 1.00 79.15 C
ATOM 22 N3 A B1237 7.543 93.816 60.467 1.00 78.39 N
ATOM 23 C4 A B1237 7.421 92.481 60.551 1.00 78.28 C
ATOM 24 P U B1238 11.481 89.641 64.826 1.00 91.05 P
ATOM 25 OP1 U B1238 11.579 88.160 64.690 1.00 89.56 O
ATOM 26 OP2 U B1238 10.207 90.257 65.300 1.00 89.28 O
ATOM 27 O5' U B1238 12.691 90.124 65.750 1.00 95.22 O
TER
Atoms:
OP1: (9.784,95.320,67.078)
OP2: (9.787,93.049,65.874)
C3': (7.781,96.807,65.506)
C1': (6.796,96.019,63.504)
C5': (10.169,96.605,64.552)
O4': (8.167,96.291,63.246)
C8: (7.601,93.607,63.703)
O2': (5.862,97.986,64.536)
C6: (4.709,91.617,63.704)
C5: (5.764,92.541,63.690)
C4: (5.430,93.878,63.574)
P: (10.342,94.423,66.034)
C4': (8.738,97.049,64.346)
C2': (6.427,96.718,64.813)
C2: (3.280,93.424,63.496)
N1: (3.452,92.100,63.602)
N3: (4.192,94.392,63.473)
N6: (4.882,90.297,63.813)
N7: (7.140,92.383,63.768)
N9: (6.621,94.565,63.586)
O5': (10.241,95.170,64.630)
O3': (7.813,97.868,66.455)
OP2: (9.787,93.049,65.874)
C3': (7.781,96.807,65.506)
C1': (6.796,96.019,63.504)
C5': (10.169,96.605,64.552)
O4': (8.167,96.291,63.246)
C8: (7.601,93.607,63.703)
O2': (5.862,97.986,64.536)
C6: (4.709,91.617,63.704)
C5: (5.764,92.541,63.690)
C4: (5.430,93.878,63.574)
P: (10.342,94.423,66.034)
C4': (8.738,97.049,64.346)
C2': (6.427,96.718,64.813)
C2: (3.280,93.424,63.496)
N1: (3.452,92.100,63.602)
N3: (4.192,94.392,63.473)
N6: (4.882,90.297,63.813)
N7: (7.140,92.383,63.768)
N9: (6.621,94.565,63.586)
O5': (10.241,95.170,64.630)
O3': (7.813,97.868,66.455)
OP1: (11.219,85.817,60.693)
OP2: (8.686,86.164,60.832)
C3': (10.871,90.386,62.397)
C1': (9.851,91.856,60.849)
C5': (11.522,88.720,60.578)
O4': (10.572,90.878,60.121)
C8: (7.811,90.334,60.736)
O2': (11.317,92.785,62.526)
C6: (5.049,92.474,60.378)
C5: (6.246,91.750,60.509)
C4: (7.421,92.481,60.551)
P: (10.008,86.579,60.312)
C4': (11.454,90.159,61.014)
C2': (10.325,91.803,62.304)
C2: (6.350,94.386,60.335)
N1: (5.137,93.818,60.286)
N3: (7.543,93.816,60.467)
N6: (3.838,91.908,60.348)
N7: (6.508,90.393,60.623)
N9: (8.427,91.562,60.712)
O5': (10.225,88.107,60.693)
O3': (11.862,90.266,63.397)
OP2: (8.686,86.164,60.832)
C3': (10.871,90.386,62.397)
C1': (9.851,91.856,60.849)
C5': (11.522,88.720,60.578)
O4': (10.572,90.878,60.121)
C8: (7.811,90.334,60.736)
O2': (11.317,92.785,62.526)
C6: (5.049,92.474,60.378)
C5: (6.246,91.750,60.509)
C4: (7.421,92.481,60.551)
P: (10.008,86.579,60.312)
C4': (11.454,90.159,61.014)
C2': (10.325,91.803,62.304)
C2: (6.350,94.386,60.335)
N1: (5.137,93.818,60.286)
N3: (7.543,93.816,60.467)
N6: (3.838,91.908,60.348)
N7: (6.508,90.393,60.623)
N9: (8.427,91.562,60.712)
O5': (10.225,88.107,60.693)
O3': (11.862,90.266,63.397)
Image (generated by PyMOL):