Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0430:0429
Extra
PDB:
ATOM 1 O3' A A 429 54.087 127.922 37.137 1.00 50.84 O
ATOM 2 P A A 430 53.378 129.021 38.066 1.00 49.78 P
ATOM 3 OP1 A A 430 53.977 128.918 39.419 1.00 50.73 O
ATOM 4 OP2 A A 430 51.916 128.879 37.906 1.00 50.07 O
ATOM 5 O5' A A 430 53.818 130.400 37.403 1.00 48.96 O
ATOM 6 C5' A A 430 54.957 131.145 37.893 1.00 48.34 C
ATOM 7 C4' A A 430 55.614 131.884 36.756 1.00 48.54 C
ATOM 8 O4' A A 430 56.353 130.946 35.934 1.00 49.15 O
ATOM 9 C3' A A 430 54.624 132.528 35.804 1.00 50.08 C
ATOM 10 O3' A A 430 54.179 133.792 36.276 1.00 50.95 O
ATOM 11 C2' A A 430 55.401 132.587 34.498 1.00 50.02 C
ATOM 12 O2' A A 430 56.293 133.678 34.442 1.00 51.80 O
ATOM 13 C1' A A 430 56.194 131.278 34.562 1.00 49.94 C
ATOM 14 N9 A A 430 55.544 130.145 33.894 1.00 50.50 N
ATOM 15 C8 A A 430 55.062 129.004 34.484 1.00 50.69 C
ATOM 16 N7 A A 430 54.536 128.152 33.640 1.00 50.76 N
ATOM 17 C5 A A 430 54.677 128.772 32.411 1.00 49.66 C
ATOM 18 C6 A A 430 54.308 128.385 31.120 1.00 50.14 C
ATOM 19 N6 A A 430 53.695 127.237 30.843 1.00 51.70 N
ATOM 20 N1 A A 430 54.587 129.229 30.108 1.00 50.33 N
ATOM 21 C2 A A 430 55.190 130.386 30.392 1.00 49.74 C
ATOM 22 N3 A A 430 55.580 130.867 31.566 1.00 49.31 N
ATOM 23 C4 A A 430 55.294 130.001 32.549 1.00 50.01 C
ATOM 24 P C A 431 52.603 134.106 36.314 1.00 53.98 P
ATOM 25 OP1 C A 431 52.410 135.491 36.809 1.00 53.55 O
ATOM 26 OP2 C A 431 51.910 132.985 37.002 1.00 54.68 O
ATOM 27 O5' C A 431 52.194 134.062 34.777 1.00 53.32 O
TER
ATOM 1 O3' C B 428 56.359 121.794 37.986 1.00 46.39 O
ATOM 2 P A B 429 54.951 122.226 38.624 1.00 47.89 P
ATOM 3 OP1 A B 429 55.197 122.379 40.088 1.00 46.32 O
ATOM 4 OP2 A B 429 53.889 121.300 38.147 1.00 46.54 O
ATOM 5 O5' A B 429 54.677 123.671 38.017 1.00 47.29 O
ATOM 6 C5' A B 429 55.631 124.731 38.200 1.00 49.70 C
ATOM 7 C4' A B 429 55.325 125.875 37.268 1.00 50.57 C
ATOM 8 O4' A B 429 55.327 125.377 35.902 1.00 51.99 O
ATOM 9 C3' A B 429 53.974 126.546 37.466 1.00 50.89 C
ATOM 10 O3' A B 429 54.087 127.922 37.137 1.00 50.84 O
ATOM 11 C2' A B 429 53.073 125.792 36.491 1.00 50.60 C
ATOM 12 O2' A B 429 51.981 126.550 36.019 1.00 48.78 O
ATOM 13 C1' A B 429 54.030 125.476 35.344 1.00 51.71 C
ATOM 14 N9 A B 429 53.705 124.188 34.728 1.00 55.39 N
ATOM 15 C8 A B 429 53.708 122.947 35.327 1.00 55.88 C
ATOM 16 N7 A B 429 53.329 121.974 34.534 1.00 56.93 N
ATOM 17 C5 A B 429 53.064 122.612 33.329 1.00 57.08 C
ATOM 18 C6 A B 429 52.609 122.136 32.093 1.00 56.43 C
ATOM 19 N6 A B 429 52.307 120.859 31.862 1.00 56.25 N
ATOM 20 N1 A B 429 52.464 123.028 31.090 1.00 56.99 N
ATOM 21 C2 A B 429 52.752 124.312 31.327 1.00 56.57 C
ATOM 22 N3 A B 429 53.174 124.887 32.450 1.00 56.91 N
ATOM 23 C4 A B 429 53.310 123.973 33.428 1.00 56.99 C
ATOM 24 P A B 430 53.378 129.021 38.066 1.00 49.78 P
ATOM 25 OP1 A B 430 53.977 128.918 39.419 1.00 50.73 O
ATOM 26 OP2 A B 430 51.916 128.879 37.906 1.00 50.07 O
ATOM 27 O5' A B 430 53.818 130.400 37.403 1.00 48.96 O
TER
ATOM 2 P A A 430 53.378 129.021 38.066 1.00 49.78 P
ATOM 3 OP1 A A 430 53.977 128.918 39.419 1.00 50.73 O
ATOM 4 OP2 A A 430 51.916 128.879 37.906 1.00 50.07 O
ATOM 5 O5' A A 430 53.818 130.400 37.403 1.00 48.96 O
ATOM 6 C5' A A 430 54.957 131.145 37.893 1.00 48.34 C
ATOM 7 C4' A A 430 55.614 131.884 36.756 1.00 48.54 C
ATOM 8 O4' A A 430 56.353 130.946 35.934 1.00 49.15 O
ATOM 9 C3' A A 430 54.624 132.528 35.804 1.00 50.08 C
ATOM 10 O3' A A 430 54.179 133.792 36.276 1.00 50.95 O
ATOM 11 C2' A A 430 55.401 132.587 34.498 1.00 50.02 C
ATOM 12 O2' A A 430 56.293 133.678 34.442 1.00 51.80 O
ATOM 13 C1' A A 430 56.194 131.278 34.562 1.00 49.94 C
ATOM 14 N9 A A 430 55.544 130.145 33.894 1.00 50.50 N
ATOM 15 C8 A A 430 55.062 129.004 34.484 1.00 50.69 C
ATOM 16 N7 A A 430 54.536 128.152 33.640 1.00 50.76 N
ATOM 17 C5 A A 430 54.677 128.772 32.411 1.00 49.66 C
ATOM 18 C6 A A 430 54.308 128.385 31.120 1.00 50.14 C
ATOM 19 N6 A A 430 53.695 127.237 30.843 1.00 51.70 N
ATOM 20 N1 A A 430 54.587 129.229 30.108 1.00 50.33 N
ATOM 21 C2 A A 430 55.190 130.386 30.392 1.00 49.74 C
ATOM 22 N3 A A 430 55.580 130.867 31.566 1.00 49.31 N
ATOM 23 C4 A A 430 55.294 130.001 32.549 1.00 50.01 C
ATOM 24 P C A 431 52.603 134.106 36.314 1.00 53.98 P
ATOM 25 OP1 C A 431 52.410 135.491 36.809 1.00 53.55 O
ATOM 26 OP2 C A 431 51.910 132.985 37.002 1.00 54.68 O
ATOM 27 O5' C A 431 52.194 134.062 34.777 1.00 53.32 O
TER
ATOM 1 O3' C B 428 56.359 121.794 37.986 1.00 46.39 O
ATOM 2 P A B 429 54.951 122.226 38.624 1.00 47.89 P
ATOM 3 OP1 A B 429 55.197 122.379 40.088 1.00 46.32 O
ATOM 4 OP2 A B 429 53.889 121.300 38.147 1.00 46.54 O
ATOM 5 O5' A B 429 54.677 123.671 38.017 1.00 47.29 O
ATOM 6 C5' A B 429 55.631 124.731 38.200 1.00 49.70 C
ATOM 7 C4' A B 429 55.325 125.875 37.268 1.00 50.57 C
ATOM 8 O4' A B 429 55.327 125.377 35.902 1.00 51.99 O
ATOM 9 C3' A B 429 53.974 126.546 37.466 1.00 50.89 C
ATOM 10 O3' A B 429 54.087 127.922 37.137 1.00 50.84 O
ATOM 11 C2' A B 429 53.073 125.792 36.491 1.00 50.60 C
ATOM 12 O2' A B 429 51.981 126.550 36.019 1.00 48.78 O
ATOM 13 C1' A B 429 54.030 125.476 35.344 1.00 51.71 C
ATOM 14 N9 A B 429 53.705 124.188 34.728 1.00 55.39 N
ATOM 15 C8 A B 429 53.708 122.947 35.327 1.00 55.88 C
ATOM 16 N7 A B 429 53.329 121.974 34.534 1.00 56.93 N
ATOM 17 C5 A B 429 53.064 122.612 33.329 1.00 57.08 C
ATOM 18 C6 A B 429 52.609 122.136 32.093 1.00 56.43 C
ATOM 19 N6 A B 429 52.307 120.859 31.862 1.00 56.25 N
ATOM 20 N1 A B 429 52.464 123.028 31.090 1.00 56.99 N
ATOM 21 C2 A B 429 52.752 124.312 31.327 1.00 56.57 C
ATOM 22 N3 A B 429 53.174 124.887 32.450 1.00 56.91 N
ATOM 23 C4 A B 429 53.310 123.973 33.428 1.00 56.99 C
ATOM 24 P A B 430 53.378 129.021 38.066 1.00 49.78 P
ATOM 25 OP1 A B 430 53.977 128.918 39.419 1.00 50.73 O
ATOM 26 OP2 A B 430 51.916 128.879 37.906 1.00 50.07 O
ATOM 27 O5' A B 430 53.818 130.400 37.403 1.00 48.96 O
TER
Atoms:
OP1: (53.977,128.918,39.419)
OP2: (51.916,128.879,37.906)
C3': (54.624,132.528,35.804)
C1': (56.194,131.278,34.562)
C5': (54.957,131.145,37.893)
O4': (56.353,130.946,35.934)
C8: (55.062,129.004,34.484)
O2': (56.293,133.678,34.442)
C6: (54.308,128.385,31.120)
C5: (54.677,128.772,32.411)
C4: (55.294,130.001,32.549)
P: (53.378,129.021,38.066)
C4': (55.614,131.884,36.756)
C2': (55.401,132.587,34.498)
C2: (55.190,130.386,30.392)
N1: (54.587,129.229,30.108)
N3: (55.580,130.867,31.566)
N6: (53.695,127.237,30.843)
N7: (54.536,128.152,33.640)
N9: (55.544,130.145,33.894)
O5': (53.818,130.400,37.403)
O3': (54.179,133.792,36.276)
OP2: (51.916,128.879,37.906)
C3': (54.624,132.528,35.804)
C1': (56.194,131.278,34.562)
C5': (54.957,131.145,37.893)
O4': (56.353,130.946,35.934)
C8: (55.062,129.004,34.484)
O2': (56.293,133.678,34.442)
C6: (54.308,128.385,31.120)
C5: (54.677,128.772,32.411)
C4: (55.294,130.001,32.549)
P: (53.378,129.021,38.066)
C4': (55.614,131.884,36.756)
C2': (55.401,132.587,34.498)
C2: (55.190,130.386,30.392)
N1: (54.587,129.229,30.108)
N3: (55.580,130.867,31.566)
N6: (53.695,127.237,30.843)
N7: (54.536,128.152,33.640)
N9: (55.544,130.145,33.894)
O5': (53.818,130.400,37.403)
O3': (54.179,133.792,36.276)
OP1: (55.197,122.379,40.088)
OP2: (53.889,121.300,38.147)
C3': (53.974,126.546,37.466)
C1': (54.030,125.476,35.344)
C5': (55.631,124.731,38.200)
O4': (55.327,125.377,35.902)
C8: (53.708,122.947,35.327)
O2': (51.981,126.550,36.019)
C6: (52.609,122.136,32.093)
C5: (53.064,122.612,33.329)
C4: (53.310,123.973,33.428)
P: (54.951,122.226,38.624)
C4': (55.325,125.875,37.268)
C2': (53.073,125.792,36.491)
C2: (52.752,124.312,31.327)
N1: (52.464,123.028,31.090)
N3: (53.174,124.887,32.450)
N6: (52.307,120.859,31.862)
N7: (53.329,121.974,34.534)
N9: (53.705,124.188,34.728)
O5': (54.677,123.671,38.017)
O3': (54.087,127.922,37.137)
OP2: (53.889,121.300,38.147)
C3': (53.974,126.546,37.466)
C1': (54.030,125.476,35.344)
C5': (55.631,124.731,38.200)
O4': (55.327,125.377,35.902)
C8: (53.708,122.947,35.327)
O2': (51.981,126.550,36.019)
C6: (52.609,122.136,32.093)
C5: (53.064,122.612,33.329)
C4: (53.310,123.973,33.428)
P: (54.951,122.226,38.624)
C4': (55.325,125.875,37.268)
C2': (53.073,125.792,36.491)
C2: (52.752,124.312,31.327)
N1: (52.464,123.028,31.090)
N3: (53.174,124.887,32.450)
N6: (52.307,120.859,31.862)
N7: (53.329,121.974,34.534)
N9: (53.705,124.188,34.728)
O5': (54.677,123.671,38.017)
O3': (54.087,127.922,37.137)
Image (generated by PyMOL):