Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01239:01237
Extra
PDB:
ATOM 1 O3' U A1238 12.212 94.994 66.079 1.00 97.95 O
ATOM 2 P A A1239 10.605 95.044 65.974 1.00 97.27 P
ATOM 3 OP1 A A1239 10.138 96.018 66.990 1.00 97.36 O
ATOM 4 OP2 A A1239 10.086 93.652 66.003 1.00 98.22 O
ATOM 5 O5' A A1239 10.309 95.660 64.535 1.00 93.80 O
ATOM 6 C5' A A1239 10.304 97.084 64.325 1.00 89.22 C
ATOM 7 C4' A A1239 8.892 97.573 64.096 1.00 86.49 C
ATOM 8 O4' A A1239 8.314 96.847 62.978 1.00 86.03 O
ATOM 9 C3' A A1239 7.916 97.331 65.234 1.00 84.85 C
ATOM 10 O3' A A1239 7.993 98.347 66.219 1.00 84.54 O
ATOM 11 C2' A A1239 6.575 97.333 64.516 1.00 84.51 C
ATOM 12 O2' A A1239 6.105 98.630 64.213 1.00 84.73 O
ATOM 13 C1' A A1239 6.937 96.601 63.224 1.00 83.39 C
ATOM 14 N9 A A1239 6.751 95.156 63.357 1.00 80.64 N
ATOM 15 C8 A A1239 7.716 94.192 63.529 1.00 79.82 C
ATOM 16 N7 A A1239 7.236 92.981 63.648 1.00 79.01 N
ATOM 17 C5 A A1239 5.865 93.156 63.543 1.00 78.03 C
ATOM 18 C6 A A1239 4.797 92.254 63.595 1.00 77.28 C
ATOM 19 N6 A A1239 4.947 90.942 63.781 1.00 76.17 N
ATOM 20 N1 A A1239 3.551 92.751 63.451 1.00 77.76 N
ATOM 21 C2 A A1239 3.403 94.071 63.270 1.00 77.93 C
ATOM 22 N3 A A1239 4.328 95.019 63.207 1.00 77.63 N
ATOM 23 C4 A A1239 5.553 94.489 63.353 1.00 78.64 C
ATOM 24 P C A1240 7.392 98.082 67.686 1.00 84.67 P
ATOM 25 OP1 C A1240 7.616 99.315 68.483 1.00 85.30 O
ATOM 26 OP2 C A1240 7.893 96.775 68.191 1.00 84.54 O
ATOM 27 O5' C A1240 5.827 97.937 67.456 1.00 81.01 O
TER
ATOM 1 O3' C B1236 10.322 87.229 58.717 1.00 56.20 O
ATOM 2 P A B1237 10.302 87.098 60.310 1.00 58.02 P
ATOM 3 OP1 A B1237 11.487 86.303 60.695 1.00 58.45 O
ATOM 4 OP2 A B1237 8.951 86.661 60.733 1.00 58.66 O
ATOM 5 O5' A B1237 10.512 88.592 60.815 1.00 62.35 O
ATOM 6 C5' A B1237 11.764 89.276 60.613 1.00 66.01 C
ATOM 7 C4' A B1237 11.613 90.738 60.943 1.00 68.57 C
ATOM 8 O4' A B1237 10.677 91.343 60.017 1.00 68.66 O
ATOM 9 C3' A B1237 11.024 91.029 62.311 1.00 71.38 C
ATOM 10 O3' A B1237 12.032 90.982 63.314 1.00 78.52 O
ATOM 11 C2' A B1237 10.448 92.427 62.124 1.00 69.55 C
ATOM 12 O2' A B1237 11.419 93.447 62.204 1.00 69.02 O
ATOM 13 C1' A B1237 9.935 92.349 60.685 1.00 69.03 C
ATOM 14 N9 A B1237 8.516 92.012 60.597 1.00 68.32 N
ATOM 15 C8 A B1237 7.932 90.775 60.691 1.00 68.43 C
ATOM 16 N7 A B1237 6.627 90.801 60.601 1.00 68.39 N
ATOM 17 C5 A B1237 6.330 92.144 60.431 1.00 68.16 C
ATOM 18 C6 A B1237 5.113 92.833 60.290 1.00 68.68 C
ATOM 19 N6 A B1237 3.918 92.238 60.302 1.00 69.80 N
ATOM 20 N1 A B1237 5.164 94.173 60.141 1.00 68.41 N
ATOM 21 C2 A B1237 6.362 94.769 60.139 1.00 68.77 C
ATOM 22 N3 A B1237 7.572 94.231 60.269 1.00 68.37 N
ATOM 23 C4 A B1237 7.485 92.900 60.415 1.00 68.14 C
ATOM 24 P U B1238 11.814 90.092 64.640 1.00 84.10 P
ATOM 25 OP1 U B1238 12.194 88.691 64.307 1.00 82.74 O
ATOM 26 OP2 U B1238 10.460 90.372 65.198 1.00 83.92 O
ATOM 27 O5' U B1238 12.919 90.664 65.645 1.00 89.20 O
TER
ATOM 2 P A A1239 10.605 95.044 65.974 1.00 97.27 P
ATOM 3 OP1 A A1239 10.138 96.018 66.990 1.00 97.36 O
ATOM 4 OP2 A A1239 10.086 93.652 66.003 1.00 98.22 O
ATOM 5 O5' A A1239 10.309 95.660 64.535 1.00 93.80 O
ATOM 6 C5' A A1239 10.304 97.084 64.325 1.00 89.22 C
ATOM 7 C4' A A1239 8.892 97.573 64.096 1.00 86.49 C
ATOM 8 O4' A A1239 8.314 96.847 62.978 1.00 86.03 O
ATOM 9 C3' A A1239 7.916 97.331 65.234 1.00 84.85 C
ATOM 10 O3' A A1239 7.993 98.347 66.219 1.00 84.54 O
ATOM 11 C2' A A1239 6.575 97.333 64.516 1.00 84.51 C
ATOM 12 O2' A A1239 6.105 98.630 64.213 1.00 84.73 O
ATOM 13 C1' A A1239 6.937 96.601 63.224 1.00 83.39 C
ATOM 14 N9 A A1239 6.751 95.156 63.357 1.00 80.64 N
ATOM 15 C8 A A1239 7.716 94.192 63.529 1.00 79.82 C
ATOM 16 N7 A A1239 7.236 92.981 63.648 1.00 79.01 N
ATOM 17 C5 A A1239 5.865 93.156 63.543 1.00 78.03 C
ATOM 18 C6 A A1239 4.797 92.254 63.595 1.00 77.28 C
ATOM 19 N6 A A1239 4.947 90.942 63.781 1.00 76.17 N
ATOM 20 N1 A A1239 3.551 92.751 63.451 1.00 77.76 N
ATOM 21 C2 A A1239 3.403 94.071 63.270 1.00 77.93 C
ATOM 22 N3 A A1239 4.328 95.019 63.207 1.00 77.63 N
ATOM 23 C4 A A1239 5.553 94.489 63.353 1.00 78.64 C
ATOM 24 P C A1240 7.392 98.082 67.686 1.00 84.67 P
ATOM 25 OP1 C A1240 7.616 99.315 68.483 1.00 85.30 O
ATOM 26 OP2 C A1240 7.893 96.775 68.191 1.00 84.54 O
ATOM 27 O5' C A1240 5.827 97.937 67.456 1.00 81.01 O
TER
ATOM 1 O3' C B1236 10.322 87.229 58.717 1.00 56.20 O
ATOM 2 P A B1237 10.302 87.098 60.310 1.00 58.02 P
ATOM 3 OP1 A B1237 11.487 86.303 60.695 1.00 58.45 O
ATOM 4 OP2 A B1237 8.951 86.661 60.733 1.00 58.66 O
ATOM 5 O5' A B1237 10.512 88.592 60.815 1.00 62.35 O
ATOM 6 C5' A B1237 11.764 89.276 60.613 1.00 66.01 C
ATOM 7 C4' A B1237 11.613 90.738 60.943 1.00 68.57 C
ATOM 8 O4' A B1237 10.677 91.343 60.017 1.00 68.66 O
ATOM 9 C3' A B1237 11.024 91.029 62.311 1.00 71.38 C
ATOM 10 O3' A B1237 12.032 90.982 63.314 1.00 78.52 O
ATOM 11 C2' A B1237 10.448 92.427 62.124 1.00 69.55 C
ATOM 12 O2' A B1237 11.419 93.447 62.204 1.00 69.02 O
ATOM 13 C1' A B1237 9.935 92.349 60.685 1.00 69.03 C
ATOM 14 N9 A B1237 8.516 92.012 60.597 1.00 68.32 N
ATOM 15 C8 A B1237 7.932 90.775 60.691 1.00 68.43 C
ATOM 16 N7 A B1237 6.627 90.801 60.601 1.00 68.39 N
ATOM 17 C5 A B1237 6.330 92.144 60.431 1.00 68.16 C
ATOM 18 C6 A B1237 5.113 92.833 60.290 1.00 68.68 C
ATOM 19 N6 A B1237 3.918 92.238 60.302 1.00 69.80 N
ATOM 20 N1 A B1237 5.164 94.173 60.141 1.00 68.41 N
ATOM 21 C2 A B1237 6.362 94.769 60.139 1.00 68.77 C
ATOM 22 N3 A B1237 7.572 94.231 60.269 1.00 68.37 N
ATOM 23 C4 A B1237 7.485 92.900 60.415 1.00 68.14 C
ATOM 24 P U B1238 11.814 90.092 64.640 1.00 84.10 P
ATOM 25 OP1 U B1238 12.194 88.691 64.307 1.00 82.74 O
ATOM 26 OP2 U B1238 10.460 90.372 65.198 1.00 83.92 O
ATOM 27 O5' U B1238 12.919 90.664 65.645 1.00 89.20 O
TER
Atoms:
OP1: (10.138,96.018,66.990)
OP2: (10.086,93.652,66.003)
C3': (7.916,97.331,65.234)
C1': (6.937,96.601,63.224)
C5': (10.304,97.084,64.325)
O4': (8.314,96.847,62.978)
C8: (7.716,94.192,63.529)
O2': (6.105,98.630,64.213)
C6: (4.797,92.254,63.595)
C5: (5.865,93.156,63.543)
C4: (5.553,94.489,63.353)
P: (10.605,95.044,65.974)
C4': (8.892,97.573,64.096)
C2': (6.575,97.333,64.516)
C2: (3.403,94.071,63.270)
N1: (3.551,92.751,63.451)
N3: (4.328,95.019,63.207)
N6: (4.947,90.942,63.781)
N7: (7.236,92.981,63.648)
N9: (6.751,95.156,63.357)
O5': (10.309,95.660,64.535)
O3': (7.993,98.347,66.219)
OP2: (10.086,93.652,66.003)
C3': (7.916,97.331,65.234)
C1': (6.937,96.601,63.224)
C5': (10.304,97.084,64.325)
O4': (8.314,96.847,62.978)
C8: (7.716,94.192,63.529)
O2': (6.105,98.630,64.213)
C6: (4.797,92.254,63.595)
C5: (5.865,93.156,63.543)
C4: (5.553,94.489,63.353)
P: (10.605,95.044,65.974)
C4': (8.892,97.573,64.096)
C2': (6.575,97.333,64.516)
C2: (3.403,94.071,63.270)
N1: (3.551,92.751,63.451)
N3: (4.328,95.019,63.207)
N6: (4.947,90.942,63.781)
N7: (7.236,92.981,63.648)
N9: (6.751,95.156,63.357)
O5': (10.309,95.660,64.535)
O3': (7.993,98.347,66.219)
OP1: (11.487,86.303,60.695)
OP2: (8.951,86.661,60.733)
C3': (11.024,91.029,62.311)
C1': (9.935,92.349,60.685)
C5': (11.764,89.276,60.613)
O4': (10.677,91.343,60.017)
C8: (7.932,90.775,60.691)
O2': (11.419,93.447,62.204)
C6: (5.113,92.833,60.290)
C5: (6.330,92.144,60.431)
C4: (7.485,92.900,60.415)
P: (10.302,87.098,60.310)
C4': (11.613,90.738,60.943)
C2': (10.448,92.427,62.124)
C2: (6.362,94.769,60.139)
N1: (5.164,94.173,60.141)
N3: (7.572,94.231,60.269)
N6: (3.918,92.238,60.302)
N7: (6.627,90.801,60.601)
N9: (8.516,92.012,60.597)
O5': (10.512,88.592,60.815)
O3': (12.032,90.982,63.314)
OP2: (8.951,86.661,60.733)
C3': (11.024,91.029,62.311)
C1': (9.935,92.349,60.685)
C5': (11.764,89.276,60.613)
O4': (10.677,91.343,60.017)
C8: (7.932,90.775,60.691)
O2': (11.419,93.447,62.204)
C6: (5.113,92.833,60.290)
C5: (6.330,92.144,60.431)
C4: (7.485,92.900,60.415)
P: (10.302,87.098,60.310)
C4': (11.613,90.738,60.943)
C2': (10.448,92.427,62.124)
C2: (6.362,94.769,60.139)
N1: (5.164,94.173,60.141)
N3: (7.572,94.231,60.269)
N6: (3.918,92.238,60.302)
N7: (6.627,90.801,60.601)
N9: (8.516,92.012,60.597)
O5': (10.512,88.592,60.815)
O3': (12.032,90.982,63.314)
Image (generated by PyMOL):