Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:01239:01237
Extra
PDB:
ATOM 1 O3' U A1238 12.151 94.249 65.778 1.00100.64 O
ATOM 2 P A A1239 10.545 94.315 65.661 1.00100.64 P
ATOM 3 OP1 A A1239 10.076 95.259 66.711 1.00100.45 O
ATOM 4 OP2 A A1239 10.016 92.923 65.639 1.00100.98 O
ATOM 5 O5' A A1239 10.266 94.985 64.240 1.00 98.12 O
ATOM 6 C5' A A1239 10.240 96.420 64.078 1.00 95.22 C
ATOM 7 C4' A A1239 8.819 96.899 63.858 1.00 93.15 C
ATOM 8 O4' A A1239 8.218 96.106 62.798 1.00 92.78 O
ATOM 9 C3' A A1239 7.869 96.723 65.035 1.00 92.43 C
ATOM 10 O3' A A1239 7.958 97.808 65.958 1.00 92.30 O
ATOM 11 C2' A A1239 6.509 96.659 64.352 1.00 91.98 C
ATOM 12 O2' A A1239 6.002 97.928 63.984 1.00 91.28 O
ATOM 13 C1' A A1239 6.850 95.859 63.094 1.00 91.11 C
ATOM 14 N9 A A1239 6.669 94.415 63.272 1.00 88.77 N
ATOM 15 C8 A A1239 7.641 93.454 63.423 1.00 87.93 C
ATOM 16 N7 A A1239 7.168 92.239 63.556 1.00 87.12 N
ATOM 17 C5 A A1239 5.793 92.409 63.490 1.00 86.70 C
ATOM 18 C6 A A1239 4.726 91.499 63.561 1.00 86.32 C
ATOM 19 N6 A A1239 4.883 90.183 63.714 1.00 85.32 N
ATOM 20 N1 A A1239 3.473 91.994 63.465 1.00 86.63 N
ATOM 21 C2 A A1239 3.316 93.314 63.307 1.00 86.95 C
ATOM 22 N3 A A1239 4.238 94.268 63.222 1.00 86.98 N
ATOM 23 C4 A A1239 5.471 93.744 63.320 1.00 87.20 C
ATOM 24 P C A1240 7.315 97.664 67.428 1.00 91.40 P
ATOM 25 OP1 C A1240 7.338 99.008 68.064 1.00 91.10 O
ATOM 26 OP2 C A1240 7.948 96.511 68.123 1.00 92.00 O
ATOM 27 O5' C A1240 5.793 97.293 67.153 1.00 89.47 O
TER
ATOM 1 O3' C B1236 9.938 86.517 58.565 1.00 59.76 O
ATOM 2 P A B1237 9.937 86.486 60.169 1.00 60.91 P
ATOM 3 OP1 A B1237 11.098 85.672 60.602 1.00 57.98 O
ATOM 4 OP2 A B1237 8.570 86.117 60.624 1.00 60.71 O
ATOM 5 O5' A B1237 10.189 88.003 60.580 1.00 63.17 O
ATOM 6 C5' A B1237 11.480 88.620 60.412 1.00 68.43 C
ATOM 7 C4' A B1237 11.403 90.081 60.780 1.00 71.51 C
ATOM 8 O4' A B1237 10.495 90.750 59.870 1.00 71.39 O
ATOM 9 C3' A B1237 10.834 90.360 62.161 1.00 74.73 C
ATOM 10 O3' A B1237 11.849 90.271 63.153 1.00 81.28 O
ATOM 11 C2' A B1237 10.279 91.771 62.012 1.00 73.49 C
ATOM 12 O2' A B1237 11.269 92.774 62.130 1.00 74.31 O
ATOM 13 C1' A B1237 9.757 91.737 60.571 1.00 72.01 C
ATOM 14 N9 A B1237 8.342 91.393 60.468 1.00 71.05 N
ATOM 15 C8 A B1237 7.774 90.148 60.566 1.00 71.40 C
ATOM 16 N7 A B1237 6.472 90.150 60.439 1.00 71.06 N
ATOM 17 C5 A B1237 6.159 91.486 60.244 1.00 71.22 C
ATOM 18 C6 A B1237 4.939 92.148 60.053 1.00 72.73 C
ATOM 19 N6 A B1237 3.755 91.528 60.033 1.00 72.82 N
ATOM 20 N1 A B1237 4.973 93.488 59.885 1.00 73.68 N
ATOM 21 C2 A B1237 6.161 94.107 59.915 1.00 72.55 C
ATOM 22 N3 A B1237 7.373 93.593 60.093 1.00 71.42 N
ATOM 23 C4 A B1237 7.302 92.262 60.254 1.00 70.96 C
ATOM 24 P U B1238 11.533 89.577 64.569 1.00 86.56 P
ATOM 25 OP1 U B1238 11.614 88.106 64.368 1.00 85.49 O
ATOM 26 OP2 U B1238 10.287 90.176 65.121 1.00 86.09 O
ATOM 27 O5' U B1238 12.771 90.013 65.478 1.00 90.33 O
TER
ATOM 2 P A A1239 10.545 94.315 65.661 1.00100.64 P
ATOM 3 OP1 A A1239 10.076 95.259 66.711 1.00100.45 O
ATOM 4 OP2 A A1239 10.016 92.923 65.639 1.00100.98 O
ATOM 5 O5' A A1239 10.266 94.985 64.240 1.00 98.12 O
ATOM 6 C5' A A1239 10.240 96.420 64.078 1.00 95.22 C
ATOM 7 C4' A A1239 8.819 96.899 63.858 1.00 93.15 C
ATOM 8 O4' A A1239 8.218 96.106 62.798 1.00 92.78 O
ATOM 9 C3' A A1239 7.869 96.723 65.035 1.00 92.43 C
ATOM 10 O3' A A1239 7.958 97.808 65.958 1.00 92.30 O
ATOM 11 C2' A A1239 6.509 96.659 64.352 1.00 91.98 C
ATOM 12 O2' A A1239 6.002 97.928 63.984 1.00 91.28 O
ATOM 13 C1' A A1239 6.850 95.859 63.094 1.00 91.11 C
ATOM 14 N9 A A1239 6.669 94.415 63.272 1.00 88.77 N
ATOM 15 C8 A A1239 7.641 93.454 63.423 1.00 87.93 C
ATOM 16 N7 A A1239 7.168 92.239 63.556 1.00 87.12 N
ATOM 17 C5 A A1239 5.793 92.409 63.490 1.00 86.70 C
ATOM 18 C6 A A1239 4.726 91.499 63.561 1.00 86.32 C
ATOM 19 N6 A A1239 4.883 90.183 63.714 1.00 85.32 N
ATOM 20 N1 A A1239 3.473 91.994 63.465 1.00 86.63 N
ATOM 21 C2 A A1239 3.316 93.314 63.307 1.00 86.95 C
ATOM 22 N3 A A1239 4.238 94.268 63.222 1.00 86.98 N
ATOM 23 C4 A A1239 5.471 93.744 63.320 1.00 87.20 C
ATOM 24 P C A1240 7.315 97.664 67.428 1.00 91.40 P
ATOM 25 OP1 C A1240 7.338 99.008 68.064 1.00 91.10 O
ATOM 26 OP2 C A1240 7.948 96.511 68.123 1.00 92.00 O
ATOM 27 O5' C A1240 5.793 97.293 67.153 1.00 89.47 O
TER
ATOM 1 O3' C B1236 9.938 86.517 58.565 1.00 59.76 O
ATOM 2 P A B1237 9.937 86.486 60.169 1.00 60.91 P
ATOM 3 OP1 A B1237 11.098 85.672 60.602 1.00 57.98 O
ATOM 4 OP2 A B1237 8.570 86.117 60.624 1.00 60.71 O
ATOM 5 O5' A B1237 10.189 88.003 60.580 1.00 63.17 O
ATOM 6 C5' A B1237 11.480 88.620 60.412 1.00 68.43 C
ATOM 7 C4' A B1237 11.403 90.081 60.780 1.00 71.51 C
ATOM 8 O4' A B1237 10.495 90.750 59.870 1.00 71.39 O
ATOM 9 C3' A B1237 10.834 90.360 62.161 1.00 74.73 C
ATOM 10 O3' A B1237 11.849 90.271 63.153 1.00 81.28 O
ATOM 11 C2' A B1237 10.279 91.771 62.012 1.00 73.49 C
ATOM 12 O2' A B1237 11.269 92.774 62.130 1.00 74.31 O
ATOM 13 C1' A B1237 9.757 91.737 60.571 1.00 72.01 C
ATOM 14 N9 A B1237 8.342 91.393 60.468 1.00 71.05 N
ATOM 15 C8 A B1237 7.774 90.148 60.566 1.00 71.40 C
ATOM 16 N7 A B1237 6.472 90.150 60.439 1.00 71.06 N
ATOM 17 C5 A B1237 6.159 91.486 60.244 1.00 71.22 C
ATOM 18 C6 A B1237 4.939 92.148 60.053 1.00 72.73 C
ATOM 19 N6 A B1237 3.755 91.528 60.033 1.00 72.82 N
ATOM 20 N1 A B1237 4.973 93.488 59.885 1.00 73.68 N
ATOM 21 C2 A B1237 6.161 94.107 59.915 1.00 72.55 C
ATOM 22 N3 A B1237 7.373 93.593 60.093 1.00 71.42 N
ATOM 23 C4 A B1237 7.302 92.262 60.254 1.00 70.96 C
ATOM 24 P U B1238 11.533 89.577 64.569 1.00 86.56 P
ATOM 25 OP1 U B1238 11.614 88.106 64.368 1.00 85.49 O
ATOM 26 OP2 U B1238 10.287 90.176 65.121 1.00 86.09 O
ATOM 27 O5' U B1238 12.771 90.013 65.478 1.00 90.33 O
TER
Atoms:
OP1: (10.076,95.259,66.711)
OP2: (10.016,92.923,65.639)
C3': (7.869,96.723,65.035)
C1': (6.850,95.859,63.094)
C5': (10.240,96.420,64.078)
O4': (8.218,96.106,62.798)
C8: (7.641,93.454,63.423)
O2': (6.002,97.928,63.984)
C6: (4.726,91.499,63.561)
C5: (5.793,92.409,63.490)
C4: (5.471,93.744,63.320)
P: (10.545,94.315,65.661)
C4': (8.819,96.899,63.858)
C2': (6.509,96.659,64.352)
C2: (3.316,93.314,63.307)
N1: (3.473,91.994,63.465)
N3: (4.238,94.268,63.222)
N6: (4.883,90.183,63.714)
N7: (7.168,92.239,63.556)
N9: (6.669,94.415,63.272)
O5': (10.266,94.985,64.240)
O3': (7.958,97.808,65.958)
OP2: (10.016,92.923,65.639)
C3': (7.869,96.723,65.035)
C1': (6.850,95.859,63.094)
C5': (10.240,96.420,64.078)
O4': (8.218,96.106,62.798)
C8: (7.641,93.454,63.423)
O2': (6.002,97.928,63.984)
C6: (4.726,91.499,63.561)
C5: (5.793,92.409,63.490)
C4: (5.471,93.744,63.320)
P: (10.545,94.315,65.661)
C4': (8.819,96.899,63.858)
C2': (6.509,96.659,64.352)
C2: (3.316,93.314,63.307)
N1: (3.473,91.994,63.465)
N3: (4.238,94.268,63.222)
N6: (4.883,90.183,63.714)
N7: (7.168,92.239,63.556)
N9: (6.669,94.415,63.272)
O5': (10.266,94.985,64.240)
O3': (7.958,97.808,65.958)
OP1: (11.098,85.672,60.602)
OP2: (8.570,86.117,60.624)
C3': (10.834,90.360,62.161)
C1': (9.757,91.737,60.571)
C5': (11.480,88.620,60.412)
O4': (10.495,90.750,59.870)
C8: (7.774,90.148,60.566)
O2': (11.269,92.774,62.130)
C6: (4.939,92.148,60.053)
C5: (6.159,91.486,60.244)
C4: (7.302,92.262,60.254)
P: (9.937,86.486,60.169)
C4': (11.403,90.081,60.780)
C2': (10.279,91.771,62.012)
C2: (6.161,94.107,59.915)
N1: (4.973,93.488,59.885)
N3: (7.373,93.593,60.093)
N6: (3.755,91.528,60.033)
N7: (6.472,90.150,60.439)
N9: (8.342,91.393,60.468)
O5': (10.189,88.003,60.580)
O3': (11.849,90.271,63.153)
OP2: (8.570,86.117,60.624)
C3': (10.834,90.360,62.161)
C1': (9.757,91.737,60.571)
C5': (11.480,88.620,60.412)
O4': (10.495,90.750,59.870)
C8: (7.774,90.148,60.566)
O2': (11.269,92.774,62.130)
C6: (4.939,92.148,60.053)
C5: (6.159,91.486,60.244)
C4: (7.302,92.262,60.254)
P: (9.937,86.486,60.169)
C4': (11.403,90.081,60.780)
C2': (10.279,91.771,62.012)
C2: (6.161,94.107,59.915)
N1: (4.973,93.488,59.885)
N3: (7.373,93.593,60.093)
N6: (3.755,91.528,60.033)
N7: (6.472,90.150,60.439)
N9: (8.342,91.393,60.468)
O5': (10.189,88.003,60.580)
O3': (11.849,90.271,63.153)
Image (generated by PyMOL):