ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:A618:A617

Extra

PDB:
ATOM 1 O3' A A 617 -26.420 189.133 186.377 1.00 18.57 O
ATOM 2 P A A 618 -25.118 189.129 187.298 1.00 24.50 P
ATOM 3 OP1 A A 618 -24.711 187.716 187.497 1.00 40.24 O
ATOM 4 OP2 A A 618 -25.345 189.983 188.487 1.00 40.20 O
ATOM 5 O5' A A 618 -24.052 189.843 186.362 1.00 8.87 O
ATOM 6 C5' A A 618 -23.734 189.273 185.086 1.00 8.87 C
ATOM 7 C4' A A 618 -23.462 190.351 184.076 1.00 8.87 C
ATOM 8 O4' A A 618 -24.650 191.157 183.877 1.00 8.87 O
ATOM 9 C3' A A 618 -22.384 191.335 184.475 1.00 8.87 C
ATOM 10 O3' A A 618 -21.106 190.823 184.146 1.00 8.87 O
ATOM 11 C2' A A 618 -22.743 192.571 183.657 1.00 8.87 C
ATOM 12 O2' A A 618 -22.269 192.556 182.331 1.00 8.87 O
ATOM 13 C1' A A 618 -24.267 192.496 183.623 1.00 8.87 C
ATOM 14 N9 A A 618 -24.845 193.348 184.654 1.00 25.08 N
ATOM 15 C8 A A 618 -25.395 192.965 185.845 1.00 25.11 C
ATOM 16 N7 A A 618 -25.797 193.967 186.583 1.00 25.05 N
ATOM 17 C5 A A 618 -25.491 195.085 185.825 1.00 25.08 C
ATOM 18 C6 A A 618 -25.660 196.451 186.060 1.00 25.19 C
ATOM 19 N6 A A 618 -26.147 196.939 187.199 1.00 25.25 N
ATOM 20 N1 A A 618 -25.293 197.310 185.082 1.00 25.26 N
ATOM 21 C2 A A 618 -24.763 196.811 183.961 1.00 25.28 C
ATOM 22 N3 A A 618 -24.528 195.545 183.637 1.00 25.27 N
ATOM 23 C4 A A 618 -24.921 194.720 184.626 1.00 25.09 C
ATOM 24 P G A 619 -19.848 191.152 185.085 1.00 17.61 P
ATOM 25 OP1 G A 619 -18.620 190.804 184.324 1.00 56.34 O
ATOM 26 OP2 G A 619 -20.100 190.520 186.412 1.00 56.40 O
ATOM 27 O5' G A 619 -19.879 192.735 185.260 1.00 26.44 O
TER

ATOM 1 O3' U B 616 -30.872 190.623 191.438 1.00 23.95 O
ATOM 2 P A B 617 -29.361 190.343 190.966 1.00 8.73 P
ATOM 3 OP1 A B 617 -28.950 189.006 191.445 1.00 63.41 O
ATOM 4 OP2 A B 617 -28.512 191.517 191.275 1.00 63.44 O
ATOM 5 O5' A B 617 -29.458 190.214 189.392 1.00 18.57 O
ATOM 6 C5' A B 617 -28.258 190.259 188.634 1.00 18.57 C
ATOM 7 C4' A B 617 -28.500 189.910 187.191 1.00 18.57 C
ATOM 8 O4' A B 617 -29.573 190.711 186.637 1.00 18.57 O
ATOM 9 C3' A B 617 -27.265 190.257 186.385 1.00 18.57 C
ATOM 10 O3' A B 617 -26.420 189.133 186.377 1.00 18.57 O
ATOM 11 C2' A B 617 -27.819 190.629 185.025 1.00 18.57 C
ATOM 12 O2' A B 617 -28.031 189.469 184.232 1.00 18.57 O
ATOM 13 C1' A B 617 -29.161 191.274 185.408 1.00 18.57 C
ATOM 14 N9 A B 617 -29.171 192.732 185.585 1.00 34.10 N
ATOM 15 C8 A B 617 -29.789 193.395 186.613 1.00 34.10 C
ATOM 16 N7 A B 617 -29.701 194.697 186.536 1.00 34.10 N
ATOM 17 C5 A B 617 -28.966 194.912 185.387 1.00 34.10 C
ATOM 18 C6 A B 617 -28.542 196.081 184.762 1.00 34.10 C
ATOM 19 N6 A B 617 -28.812 197.292 185.220 1.00 34.10 N
ATOM 20 N1 A B 617 -27.826 195.969 183.636 1.00 34.10 N
ATOM 21 C2 A B 617 -27.567 194.748 183.170 1.00 34.10 C
ATOM 22 N3 A B 617 -27.914 193.562 183.668 1.00 34.10 N
ATOM 23 C4 A B 617 -28.622 193.714 184.794 1.00 34.10 C
ATOM 24 P A B 618 -25.118 189.129 187.298 1.00 24.50 P
ATOM 25 OP1 A B 618 -24.711 187.716 187.497 1.00 40.24 O
ATOM 26 OP2 A B 618 -25.345 189.983 188.487 1.00 40.20 O
ATOM 27 O5' A B 618 -24.052 189.843 186.362 1.00 8.87 O
TER

Atoms:
OP1: (-24.711,187.716,187.497)
OP2: (-25.345,189.983,188.487)
C3': (-22.384,191.335,184.475)
C1': (-24.267,192.496,183.623)
C5': (-23.734,189.273,185.086)
O4': (-24.650,191.157,183.877)
C8: (-25.395,192.965,185.845)
O2': (-22.269,192.556,182.331)
C6: (-25.660,196.451,186.060)
C5: (-25.491,195.085,185.825)
C4: (-24.921,194.720,184.626)
P: (-25.118,189.129,187.298)
C4': (-23.462,190.351,184.076)
C2': (-22.743,192.571,183.657)
C2: (-24.763,196.811,183.961)
N1: (-25.293,197.310,185.082)
N3: (-24.528,195.545,183.637)
N6: (-26.147,196.939,187.199)
N7: (-25.797,193.967,186.583)
N9: (-24.845,193.348,184.654)
O5': (-24.052,189.843,186.362)
O3': (-21.106,190.823,184.146)
OP1: (-28.950,189.006,191.445)
OP2: (-28.512,191.517,191.275)
C3': (-27.265,190.257,186.385)
C1': (-29.161,191.274,185.408)
C5': (-28.258,190.259,188.634)
O4': (-29.573,190.711,186.637)
C8: (-29.789,193.395,186.613)
O2': (-28.031,189.469,184.232)
C6: (-28.542,196.081,184.762)
C5: (-28.966,194.912,185.387)
C4: (-28.622,193.714,184.794)
P: (-29.361,190.343,190.966)
C4': (-28.500,189.910,187.191)
C2': (-27.819,190.629,185.025)
C2: (-27.567,194.748,183.170)
N1: (-27.826,195.969,183.636)
N3: (-27.914,193.562,183.668)
N6: (-28.812,197.292,185.220)
N7: (-29.701,194.697,186.536)
N9: (-29.171,192.732,185.585)
O5': (-29.458,190.214,189.392)
O3': (-26.420,189.133,186.377)
Image (generated by PyMOL):
PyMOL image
show in jmol