Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1129:A1128
Extra
PDB:
ATOM 1 O3' A A1128 -100.504 103.871 40.410 1.00 88.87 O
ATOM 2 P A A1129 -99.206 102.967 40.692 1.00 98.15 P
ATOM 3 OP1 A A1129 -99.750 101.623 40.980 1.00 80.06 O
ATOM 4 OP2 A A1129 -98.330 103.631 41.694 1.00 80.78 O
ATOM 5 O5' A A1129 -98.447 102.927 39.285 1.00100.32 O
ATOM 6 C5' A A1129 -98.716 101.874 38.340 1.00102.05 C
ATOM 7 C4' A A1129 -98.331 102.282 36.934 1.00103.31 C
ATOM 8 O4' A A1129 -99.108 103.430 36.506 1.00103.15 O
ATOM 9 C3' A A1129 -96.890 102.682 36.660 1.00104.27 C
ATOM 10 O3' A A1129 -96.068 101.537 36.468 1.00106.02 O
ATOM 11 C2' A A1129 -97.007 103.490 35.367 1.00103.75 C
ATOM 12 O2' A A1129 -97.009 102.680 34.208 1.00103.63 O
ATOM 13 C1' A A1129 -98.386 104.139 35.511 1.00102.95 C
ATOM 14 N9 A A1129 -98.327 105.554 35.871 1.00 71.34 N
ATOM 15 C8 A A1129 -98.357 106.110 37.122 1.00 71.55 C
ATOM 16 N7 A A1129 -98.278 107.418 37.124 1.00 71.57 N
ATOM 17 C5 A A1129 -98.193 107.749 35.778 1.00 71.75 C
ATOM 18 C6 A A1129 -98.083 108.981 35.114 1.00 71.90 C
ATOM 19 N6 A A1129 -98.042 110.157 35.744 1.00 72.64 N
ATOM 20 N1 A A1129 -98.013 108.965 33.767 1.00 71.73 N
ATOM 21 C2 A A1129 -98.052 107.783 33.141 1.00 71.66 C
ATOM 22 N3 A A1129 -98.154 106.557 33.654 1.00 71.45 N
ATOM 23 C4 A A1129 -98.222 106.610 34.994 1.00 71.47 C
ATOM 24 P C A1130 -94.472 101.707 36.367 1.00100.19 P
ATOM 25 OP1 C A1130 -93.915 100.334 36.317 1.00123.36 O
ATOM 26 OP2 C A1130 -94.020 102.642 37.429 1.00123.55 O
ATOM 27 O5' C A1130 -94.231 102.404 34.953 1.00125.95 O
TER
ATOM 1 O3' U B1127 -103.281 108.708 44.091 1.00 53.50 O
ATOM 2 P A B1128 -101.892 107.901 44.072 1.00103.46 P
ATOM 3 OP1 A B1128 -102.008 106.805 45.067 1.00 83.86 O
ATOM 4 OP2 A B1128 -100.769 108.869 44.170 1.00 84.44 O
ATOM 5 O5' A B1128 -101.836 107.268 42.614 1.00 85.72 O
ATOM 6 C5' A B1128 -102.691 106.178 42.253 1.00 86.74 C
ATOM 7 C4' A B1128 -102.154 105.493 41.025 1.00 87.32 C
ATOM 8 O4' A B1128 -102.303 106.367 39.871 1.00 87.72 O
ATOM 9 C3' A B1128 -100.678 105.114 41.091 1.00 87.71 C
ATOM 10 O3' A B1128 -100.504 103.871 40.410 1.00 88.87 O
ATOM 11 C2' A B1128 -100.006 106.236 40.302 1.00 86.98 C
ATOM 12 O2' A B1128 -98.768 105.864 39.733 1.00 85.90 O
ATOM 13 C1' A B1128 -101.057 106.508 39.226 1.00 87.18 C
ATOM 14 N9 A B1128 -101.001 107.815 38.565 1.00111.07 N
ATOM 15 C8 A B1128 -100.754 109.056 39.105 1.00111.49 C
ATOM 16 N7 A B1128 -100.761 110.026 38.222 1.00112.05 N
ATOM 17 C5 A B1128 -101.037 109.386 37.021 1.00111.76 C
ATOM 18 C6 A B1128 -101.176 109.860 35.701 1.00111.89 C
ATOM 19 N6 A B1128 -101.056 111.142 35.359 1.00111.47 N
ATOM 20 N1 A B1128 -101.446 108.958 34.733 1.00112.37 N
ATOM 21 C2 A B1128 -101.567 107.672 35.073 1.00112.53 C
ATOM 22 N3 A B1128 -101.459 107.103 36.274 1.00112.27 N
ATOM 23 C4 A B1128 -101.190 108.026 37.217 1.00111.86 C
ATOM 24 P A B1129 -99.206 102.967 40.692 1.00 98.15 P
ATOM 25 OP1 A B1129 -99.750 101.623 40.980 1.00 80.06 O
ATOM 26 OP2 A B1129 -98.330 103.631 41.694 1.00 80.78 O
ATOM 27 O5' A B1129 -98.447 102.927 39.285 1.00100.32 O
TER
ATOM 2 P A A1129 -99.206 102.967 40.692 1.00 98.15 P
ATOM 3 OP1 A A1129 -99.750 101.623 40.980 1.00 80.06 O
ATOM 4 OP2 A A1129 -98.330 103.631 41.694 1.00 80.78 O
ATOM 5 O5' A A1129 -98.447 102.927 39.285 1.00100.32 O
ATOM 6 C5' A A1129 -98.716 101.874 38.340 1.00102.05 C
ATOM 7 C4' A A1129 -98.331 102.282 36.934 1.00103.31 C
ATOM 8 O4' A A1129 -99.108 103.430 36.506 1.00103.15 O
ATOM 9 C3' A A1129 -96.890 102.682 36.660 1.00104.27 C
ATOM 10 O3' A A1129 -96.068 101.537 36.468 1.00106.02 O
ATOM 11 C2' A A1129 -97.007 103.490 35.367 1.00103.75 C
ATOM 12 O2' A A1129 -97.009 102.680 34.208 1.00103.63 O
ATOM 13 C1' A A1129 -98.386 104.139 35.511 1.00102.95 C
ATOM 14 N9 A A1129 -98.327 105.554 35.871 1.00 71.34 N
ATOM 15 C8 A A1129 -98.357 106.110 37.122 1.00 71.55 C
ATOM 16 N7 A A1129 -98.278 107.418 37.124 1.00 71.57 N
ATOM 17 C5 A A1129 -98.193 107.749 35.778 1.00 71.75 C
ATOM 18 C6 A A1129 -98.083 108.981 35.114 1.00 71.90 C
ATOM 19 N6 A A1129 -98.042 110.157 35.744 1.00 72.64 N
ATOM 20 N1 A A1129 -98.013 108.965 33.767 1.00 71.73 N
ATOM 21 C2 A A1129 -98.052 107.783 33.141 1.00 71.66 C
ATOM 22 N3 A A1129 -98.154 106.557 33.654 1.00 71.45 N
ATOM 23 C4 A A1129 -98.222 106.610 34.994 1.00 71.47 C
ATOM 24 P C A1130 -94.472 101.707 36.367 1.00100.19 P
ATOM 25 OP1 C A1130 -93.915 100.334 36.317 1.00123.36 O
ATOM 26 OP2 C A1130 -94.020 102.642 37.429 1.00123.55 O
ATOM 27 O5' C A1130 -94.231 102.404 34.953 1.00125.95 O
TER
ATOM 1 O3' U B1127 -103.281 108.708 44.091 1.00 53.50 O
ATOM 2 P A B1128 -101.892 107.901 44.072 1.00103.46 P
ATOM 3 OP1 A B1128 -102.008 106.805 45.067 1.00 83.86 O
ATOM 4 OP2 A B1128 -100.769 108.869 44.170 1.00 84.44 O
ATOM 5 O5' A B1128 -101.836 107.268 42.614 1.00 85.72 O
ATOM 6 C5' A B1128 -102.691 106.178 42.253 1.00 86.74 C
ATOM 7 C4' A B1128 -102.154 105.493 41.025 1.00 87.32 C
ATOM 8 O4' A B1128 -102.303 106.367 39.871 1.00 87.72 O
ATOM 9 C3' A B1128 -100.678 105.114 41.091 1.00 87.71 C
ATOM 10 O3' A B1128 -100.504 103.871 40.410 1.00 88.87 O
ATOM 11 C2' A B1128 -100.006 106.236 40.302 1.00 86.98 C
ATOM 12 O2' A B1128 -98.768 105.864 39.733 1.00 85.90 O
ATOM 13 C1' A B1128 -101.057 106.508 39.226 1.00 87.18 C
ATOM 14 N9 A B1128 -101.001 107.815 38.565 1.00111.07 N
ATOM 15 C8 A B1128 -100.754 109.056 39.105 1.00111.49 C
ATOM 16 N7 A B1128 -100.761 110.026 38.222 1.00112.05 N
ATOM 17 C5 A B1128 -101.037 109.386 37.021 1.00111.76 C
ATOM 18 C6 A B1128 -101.176 109.860 35.701 1.00111.89 C
ATOM 19 N6 A B1128 -101.056 111.142 35.359 1.00111.47 N
ATOM 20 N1 A B1128 -101.446 108.958 34.733 1.00112.37 N
ATOM 21 C2 A B1128 -101.567 107.672 35.073 1.00112.53 C
ATOM 22 N3 A B1128 -101.459 107.103 36.274 1.00112.27 N
ATOM 23 C4 A B1128 -101.190 108.026 37.217 1.00111.86 C
ATOM 24 P A B1129 -99.206 102.967 40.692 1.00 98.15 P
ATOM 25 OP1 A B1129 -99.750 101.623 40.980 1.00 80.06 O
ATOM 26 OP2 A B1129 -98.330 103.631 41.694 1.00 80.78 O
ATOM 27 O5' A B1129 -98.447 102.927 39.285 1.00100.32 O
TER
Atoms:
OP1: (-99.750,101.623,40.980)
OP2: (-98.330,103.631,41.694)
C3': (-96.890,102.682,36.660)
C1': (-98.386,104.139,35.511)
C5': (-98.716,101.874,38.340)
O4': (-99.108,103.430,36.506)
C8: (-98.357,106.110,37.122)
O2': (-97.009,102.680,34.208)
C6: (-98.083,108.981,35.114)
C5: (-98.193,107.749,35.778)
C4: (-98.222,106.610,34.994)
P: (-99.206,102.967,40.692)
C4': (-98.331,102.282,36.934)
C2': (-97.007,103.490,35.367)
C2: (-98.052,107.783,33.141)
N1: (-98.013,108.965,33.767)
N3: (-98.154,106.557,33.654)
N6: (-98.042,110.157,35.744)
N7: (-98.278,107.418,37.124)
N9: (-98.327,105.554,35.871)
O5': (-98.447,102.927,39.285)
O3': (-96.068,101.537,36.468)
OP2: (-98.330,103.631,41.694)
C3': (-96.890,102.682,36.660)
C1': (-98.386,104.139,35.511)
C5': (-98.716,101.874,38.340)
O4': (-99.108,103.430,36.506)
C8: (-98.357,106.110,37.122)
O2': (-97.009,102.680,34.208)
C6: (-98.083,108.981,35.114)
C5: (-98.193,107.749,35.778)
C4: (-98.222,106.610,34.994)
P: (-99.206,102.967,40.692)
C4': (-98.331,102.282,36.934)
C2': (-97.007,103.490,35.367)
C2: (-98.052,107.783,33.141)
N1: (-98.013,108.965,33.767)
N3: (-98.154,106.557,33.654)
N6: (-98.042,110.157,35.744)
N7: (-98.278,107.418,37.124)
N9: (-98.327,105.554,35.871)
O5': (-98.447,102.927,39.285)
O3': (-96.068,101.537,36.468)
OP1: (-102.008,106.805,45.067)
OP2: (-100.769,108.869,44.170)
C3': (-100.678,105.114,41.091)
C1': (-101.057,106.508,39.226)
C5': (-102.691,106.178,42.253)
O4': (-102.303,106.367,39.871)
C8: (-100.754,109.056,39.105)
O2': (-98.768,105.864,39.733)
C6: (-101.176,109.860,35.701)
C5: (-101.037,109.386,37.021)
C4: (-101.190,108.026,37.217)
P: (-101.892,107.901,44.072)
C4': (-102.154,105.493,41.025)
C2': (-100.006,106.236,40.302)
C2: (-101.567,107.672,35.073)
N1: (-101.446,108.958,34.733)
N3: (-101.459,107.103,36.274)
N6: (-101.056,111.142,35.359)
N7: (-100.761,110.026,38.222)
N9: (-101.001,107.815,38.565)
O5': (-101.836,107.268,42.614)
O3': (-100.504,103.871,40.410)
OP2: (-100.769,108.869,44.170)
C3': (-100.678,105.114,41.091)
C1': (-101.057,106.508,39.226)
C5': (-102.691,106.178,42.253)
O4': (-102.303,106.367,39.871)
C8: (-100.754,109.056,39.105)
O2': (-98.768,105.864,39.733)
C6: (-101.176,109.860,35.701)
C5: (-101.037,109.386,37.021)
C4: (-101.190,108.026,37.217)
P: (-101.892,107.901,44.072)
C4': (-102.154,105.493,41.025)
C2': (-100.006,106.236,40.302)
C2: (-101.567,107.672,35.073)
N1: (-101.446,108.958,34.733)
N3: (-101.459,107.103,36.274)
N6: (-101.056,111.142,35.359)
N7: (-100.761,110.026,38.222)
N9: (-101.001,107.815,38.565)
O5': (-101.836,107.268,42.614)
O3': (-100.504,103.871,40.410)
Image (generated by PyMOL):