Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01399:01398
Extra
PDB:
ATOM 1 O3' C A1398 55.250 164.719 66.705 1.00 56.99 O
ATOM 2 P U A1399 55.192 164.838 65.105 1.00 61.40 P
ATOM 3 OP1 U A1399 55.167 163.455 64.551 1.00 57.95 O
ATOM 4 OP2 U A1399 56.256 165.791 64.663 1.00 60.15 O
ATOM 5 O5' U A1399 53.774 165.511 64.850 1.00 60.19 O
ATOM 6 C5' U A1399 52.562 164.782 65.105 1.00 63.47 C
ATOM 7 C4' U A1399 51.369 165.581 64.641 1.00 66.17 C
ATOM 8 O4' U A1399 51.125 166.682 65.551 1.00 65.92 O
ATOM 9 C3' U A1399 51.514 166.248 63.280 1.00 67.19 C
ATOM 10 O3' U A1399 51.273 165.339 62.211 1.00 70.08 O
ATOM 11 C2' U A1399 50.480 167.359 63.366 1.00 66.79 C
ATOM 12 O2' U A1399 49.157 166.881 63.190 1.00 66.23 O
ATOM 13 C1' U A1399 50.662 167.808 64.818 1.00 66.66 C
ATOM 14 N1 U A1399 51.632 168.906 64.987 1.00 66.51 N
ATOM 15 C2 U A1399 51.161 170.210 64.902 1.00 66.09 C
ATOM 16 O2 U A1399 49.994 170.486 64.670 1.00 67.11 O
ATOM 17 N3 U A1399 52.111 171.181 65.099 1.00 65.29 N
ATOM 18 C4 U A1399 53.450 170.995 65.355 1.00 64.74 C
ATOM 19 O4 U A1399 54.180 171.975 65.479 1.00 64.93 O
ATOM 20 C5 U A1399 53.863 169.630 65.416 1.00 65.25 C
ATOM 21 C6 U A1399 52.967 168.656 65.235 1.00 66.12 C
ATOM 22 P G A1400 52.153 165.434 60.868 1.00 70.73 P
ATOM 23 OP1 G A1400 51.716 164.284 60.027 1.00 70.27 O
ATOM 24 OP2 G A1400 53.591 165.581 61.221 1.00 70.68 O
ATOM 25 O5' G A1400 51.654 166.792 60.202 1.00 69.14 O
TER
ATOM 1 O3' G B1397 60.364 167.810 67.769 1.00 48.80 O
ATOM 2 P C B1398 59.122 167.490 66.808 1.00 49.42 P
ATOM 3 OP1 C B1398 59.484 166.241 66.105 1.00 49.07 O
ATOM 4 OP2 C B1398 58.800 168.703 66.021 1.00 50.11 O
ATOM 5 O5' C B1398 57.919 167.180 67.801 1.00 46.73 O
ATOM 6 C5' C B1398 57.726 165.865 68.346 1.00 47.96 C
ATOM 7 C4' C B1398 56.272 165.657 68.669 1.00 49.87 C
ATOM 8 O4' C B1398 55.857 166.622 69.670 1.00 50.39 O
ATOM 9 C3' C B1398 55.350 165.895 67.493 1.00 51.94 C
ATOM 10 O3' C B1398 55.250 164.719 66.705 1.00 56.99 O
ATOM 11 C2' C B1398 54.049 166.322 68.163 1.00 51.16 C
ATOM 12 O2' C B1398 53.290 165.243 68.676 1.00 50.65 O
ATOM 13 C1' C B1398 54.583 167.149 69.334 1.00 50.11 C
ATOM 14 N1 C B1398 54.765 168.584 69.054 1.00 49.65 N
ATOM 15 C2 C B1398 53.681 169.453 69.173 1.00 48.66 C
ATOM 16 O2 C B1398 52.571 168.994 69.473 1.00 47.90 O
ATOM 17 N3 C B1398 53.878 170.778 68.963 1.00 49.73 N
ATOM 18 C4 C B1398 55.100 171.236 68.654 1.00 50.35 C
ATOM 19 N4 C B1398 55.268 172.548 68.499 1.00 50.08 N
ATOM 20 C5 C B1398 56.208 170.369 68.502 1.00 50.80 C
ATOM 21 C6 C B1398 55.999 169.065 68.702 1.00 51.47 C
ATOM 22 P U B1399 55.192 164.838 65.105 1.00 61.40 P
ATOM 23 OP1 U B1399 55.167 163.455 64.551 1.00 57.95 O
ATOM 24 OP2 U B1399 56.256 165.791 64.663 1.00 60.15 O
ATOM 25 O5' U B1399 53.774 165.511 64.850 1.00 60.19 O
TER
ATOM 2 P U A1399 55.192 164.838 65.105 1.00 61.40 P
ATOM 3 OP1 U A1399 55.167 163.455 64.551 1.00 57.95 O
ATOM 4 OP2 U A1399 56.256 165.791 64.663 1.00 60.15 O
ATOM 5 O5' U A1399 53.774 165.511 64.850 1.00 60.19 O
ATOM 6 C5' U A1399 52.562 164.782 65.105 1.00 63.47 C
ATOM 7 C4' U A1399 51.369 165.581 64.641 1.00 66.17 C
ATOM 8 O4' U A1399 51.125 166.682 65.551 1.00 65.92 O
ATOM 9 C3' U A1399 51.514 166.248 63.280 1.00 67.19 C
ATOM 10 O3' U A1399 51.273 165.339 62.211 1.00 70.08 O
ATOM 11 C2' U A1399 50.480 167.359 63.366 1.00 66.79 C
ATOM 12 O2' U A1399 49.157 166.881 63.190 1.00 66.23 O
ATOM 13 C1' U A1399 50.662 167.808 64.818 1.00 66.66 C
ATOM 14 N1 U A1399 51.632 168.906 64.987 1.00 66.51 N
ATOM 15 C2 U A1399 51.161 170.210 64.902 1.00 66.09 C
ATOM 16 O2 U A1399 49.994 170.486 64.670 1.00 67.11 O
ATOM 17 N3 U A1399 52.111 171.181 65.099 1.00 65.29 N
ATOM 18 C4 U A1399 53.450 170.995 65.355 1.00 64.74 C
ATOM 19 O4 U A1399 54.180 171.975 65.479 1.00 64.93 O
ATOM 20 C5 U A1399 53.863 169.630 65.416 1.00 65.25 C
ATOM 21 C6 U A1399 52.967 168.656 65.235 1.00 66.12 C
ATOM 22 P G A1400 52.153 165.434 60.868 1.00 70.73 P
ATOM 23 OP1 G A1400 51.716 164.284 60.027 1.00 70.27 O
ATOM 24 OP2 G A1400 53.591 165.581 61.221 1.00 70.68 O
ATOM 25 O5' G A1400 51.654 166.792 60.202 1.00 69.14 O
TER
ATOM 1 O3' G B1397 60.364 167.810 67.769 1.00 48.80 O
ATOM 2 P C B1398 59.122 167.490 66.808 1.00 49.42 P
ATOM 3 OP1 C B1398 59.484 166.241 66.105 1.00 49.07 O
ATOM 4 OP2 C B1398 58.800 168.703 66.021 1.00 50.11 O
ATOM 5 O5' C B1398 57.919 167.180 67.801 1.00 46.73 O
ATOM 6 C5' C B1398 57.726 165.865 68.346 1.00 47.96 C
ATOM 7 C4' C B1398 56.272 165.657 68.669 1.00 49.87 C
ATOM 8 O4' C B1398 55.857 166.622 69.670 1.00 50.39 O
ATOM 9 C3' C B1398 55.350 165.895 67.493 1.00 51.94 C
ATOM 10 O3' C B1398 55.250 164.719 66.705 1.00 56.99 O
ATOM 11 C2' C B1398 54.049 166.322 68.163 1.00 51.16 C
ATOM 12 O2' C B1398 53.290 165.243 68.676 1.00 50.65 O
ATOM 13 C1' C B1398 54.583 167.149 69.334 1.00 50.11 C
ATOM 14 N1 C B1398 54.765 168.584 69.054 1.00 49.65 N
ATOM 15 C2 C B1398 53.681 169.453 69.173 1.00 48.66 C
ATOM 16 O2 C B1398 52.571 168.994 69.473 1.00 47.90 O
ATOM 17 N3 C B1398 53.878 170.778 68.963 1.00 49.73 N
ATOM 18 C4 C B1398 55.100 171.236 68.654 1.00 50.35 C
ATOM 19 N4 C B1398 55.268 172.548 68.499 1.00 50.08 N
ATOM 20 C5 C B1398 56.208 170.369 68.502 1.00 50.80 C
ATOM 21 C6 C B1398 55.999 169.065 68.702 1.00 51.47 C
ATOM 22 P U B1399 55.192 164.838 65.105 1.00 61.40 P
ATOM 23 OP1 U B1399 55.167 163.455 64.551 1.00 57.95 O
ATOM 24 OP2 U B1399 56.256 165.791 64.663 1.00 60.15 O
ATOM 25 O5' U B1399 53.774 165.511 64.850 1.00 60.19 O
TER
Atoms:
C4: (53.450,170.995,65.355)
N3: (52.111,171.181,65.099)
OP1: (55.167,163.455,64.551)
OP2: (56.256,165.791,64.663)
C2: (51.161,170.210,64.902)
C1': (50.662,167.808,64.818)
C3': (51.514,166.248,63.280)
O5': (53.774,165.511,64.850)
O4': (51.125,166.682,65.551)
C5': (52.562,164.782,65.105)
P: (55.192,164.838,65.105)
C4': (51.369,165.581,64.641)
C2': (50.480,167.359,63.366)
O2': (49.157,166.881,63.190)
N1: (51.632,168.906,64.987)
O4: (54.180,171.975,65.479)
O2: (49.994,170.486,64.670)
C6: (52.967,168.656,65.235)
C5: (53.863,169.630,65.416)
O3': (51.273,165.339,62.211)
N3: (52.111,171.181,65.099)
OP1: (55.167,163.455,64.551)
OP2: (56.256,165.791,64.663)
C2: (51.161,170.210,64.902)
C1': (50.662,167.808,64.818)
C3': (51.514,166.248,63.280)
O5': (53.774,165.511,64.850)
O4': (51.125,166.682,65.551)
C5': (52.562,164.782,65.105)
P: (55.192,164.838,65.105)
C4': (51.369,165.581,64.641)
C2': (50.480,167.359,63.366)
O2': (49.157,166.881,63.190)
N1: (51.632,168.906,64.987)
O4: (54.180,171.975,65.479)
O2: (49.994,170.486,64.670)
C6: (52.967,168.656,65.235)
C5: (53.863,169.630,65.416)
O3': (51.273,165.339,62.211)
C2: (53.681,169.453,69.173)
OP1: (59.484,166.241,66.105)
OP2: (58.800,168.703,66.021)
C4: (55.100,171.236,68.654)
O5': (57.919,167.180,67.801)
C3': (55.350,165.895,67.493)
C1': (54.583,167.149,69.334)
O4': (55.857,166.622,69.670)
C5': (57.726,165.865,68.346)
P: (59.122,167.490,66.808)
O2: (52.571,168.994,69.473)
C4': (56.272,165.657,68.669)
C2': (54.049,166.322,68.163)
O2': (53.290,165.243,68.676)
N1: (54.765,168.584,69.054)
N3: (53.878,170.778,68.963)
N4: (55.268,172.548,68.499)
C6: (55.999,169.065,68.702)
C5: (56.208,170.369,68.502)
O3': (55.250,164.719,66.705)
OP1: (59.484,166.241,66.105)
OP2: (58.800,168.703,66.021)
C4: (55.100,171.236,68.654)
O5': (57.919,167.180,67.801)
C3': (55.350,165.895,67.493)
C1': (54.583,167.149,69.334)
O4': (55.857,166.622,69.670)
C5': (57.726,165.865,68.346)
P: (59.122,167.490,66.808)
O2: (52.571,168.994,69.473)
C4': (56.272,165.657,68.669)
C2': (54.049,166.322,68.163)
O2': (53.290,165.243,68.676)
N1: (54.765,168.584,69.054)
N3: (53.878,170.778,68.963)
N4: (55.268,172.548,68.499)
C6: (55.999,169.065,68.702)
C5: (56.208,170.369,68.502)
O3': (55.250,164.719,66.705)
Image (generated by PyMOL):