ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:A430:A429

Extra

PDB:
ATOM 1 O3' A A 429 54.064 127.924 37.476 1.00 53.03 O
ATOM 2 P A A 430 53.405 129.018 38.448 1.00 52.10 P
ATOM 3 OP1 A A 430 54.035 128.822 39.779 1.00 53.04 O
ATOM 4 OP2 A A 430 51.943 128.956 38.325 1.00 51.64 O
ATOM 5 O5' A A 430 53.849 130.405 37.810 1.00 51.40 O
ATOM 6 C5' A A 430 54.989 131.124 38.296 1.00 51.82 C
ATOM 7 C4' A A 430 55.649 131.840 37.157 1.00 53.83 C
ATOM 8 O4' A A 430 56.364 130.882 36.336 1.00 53.54 O
ATOM 9 C3' A A 430 54.669 132.493 36.205 1.00 55.64 C
ATOM 10 O3' A A 430 54.221 133.753 36.693 1.00 59.33 O
ATOM 11 C2' A A 430 55.471 132.567 34.913 1.00 55.68 C
ATOM 12 O2' A A 430 56.372 133.652 34.880 1.00 54.18 O
ATOM 13 C1' A A 430 56.260 131.251 34.966 1.00 55.85 C
ATOM 14 N9 A A 430 55.647 130.137 34.227 1.00 57.34 N
ATOM 15 C8 A A 430 55.190 128.949 34.740 1.00 57.35 C
ATOM 16 N7 A A 430 54.668 128.148 33.846 1.00 56.85 N
ATOM 17 C5 A A 430 54.786 128.852 32.660 1.00 58.23 C
ATOM 18 C6 A A 430 54.392 128.558 31.349 1.00 59.55 C
ATOM 19 N6 A A 430 53.779 127.427 30.996 1.00 61.03 N
ATOM 20 N1 A A 430 54.646 129.481 30.395 1.00 60.31 N
ATOM 21 C2 A A 430 55.254 130.620 30.748 1.00 59.44 C
ATOM 22 N3 A A 430 55.665 131.012 31.947 1.00 59.01 N
ATOM 23 C4 A A 430 55.397 130.074 32.873 1.00 58.10 C
ATOM 24 P C A 431 52.645 134.081 36.721 1.00 62.36 P
ATOM 25 OP1 C A 431 52.476 135.486 37.182 1.00 62.34 O
ATOM 26 OP2 C A 431 51.913 132.996 37.423 1.00 64.37 O
ATOM 27 O5' C A 431 52.248 134.042 35.182 1.00 62.84 O
TER

ATOM 1 O3' C B 428 56.358 121.701 38.418 1.00 52.66 O
ATOM 2 P A B 429 54.952 122.260 38.951 1.00 53.73 P
ATOM 3 OP1 A B 429 54.992 122.430 40.425 1.00 51.92 O
ATOM 4 OP2 A B 429 53.892 121.425 38.341 1.00 54.01 O
ATOM 5 O5' A B 429 54.816 123.694 38.283 1.00 52.58 O
ATOM 6 C5' A B 429 55.735 124.764 38.564 1.00 54.30 C
ATOM 7 C4' A B 429 55.432 125.921 37.644 1.00 54.21 C
ATOM 8 O4' A B 429 55.416 125.389 36.286 1.00 55.58 O
ATOM 9 C3' A B 429 54.053 126.551 37.848 1.00 54.14 C
ATOM 10 O3' A B 429 54.064 127.924 37.476 1.00 53.03 O
ATOM 11 C2' A B 429 53.170 125.739 36.906 1.00 54.54 C
ATOM 12 O2' A B 429 51.990 126.365 36.447 1.00 53.32 O
ATOM 13 C1' A B 429 54.114 125.493 35.739 1.00 55.35 C
ATOM 14 N9 A B 429 53.788 124.226 35.100 1.00 56.14 N
ATOM 15 C8 A B 429 53.811 122.975 35.666 1.00 56.23 C
ATOM 16 N7 A B 429 53.464 122.017 34.845 1.00 56.70 N
ATOM 17 C5 A B 429 53.188 122.682 33.660 1.00 56.51 C
ATOM 18 C6 A B 429 52.769 122.227 32.415 1.00 56.23 C
ATOM 19 N6 A B 429 52.511 120.947 32.158 1.00 56.59 N
ATOM 20 N1 A B 429 52.612 123.139 31.430 1.00 56.81 N
ATOM 21 C2 A B 429 52.844 124.428 31.705 1.00 56.92 C
ATOM 22 N3 A B 429 53.224 124.987 32.850 1.00 56.96 N
ATOM 23 C4 A B 429 53.387 124.044 33.800 1.00 56.74 C
ATOM 24 P A B 430 53.405 129.018 38.448 1.00 52.10 P
ATOM 25 OP1 A B 430 54.035 128.822 39.779 1.00 53.04 O
ATOM 26 OP2 A B 430 51.943 128.956 38.325 1.00 51.64 O
ATOM 27 O5' A B 430 53.849 130.405 37.810 1.00 51.40 O
TER

Atoms:
OP1: (54.035,128.822,39.779)
OP2: (51.943,128.956,38.325)
C3': (54.669,132.493,36.205)
C1': (56.260,131.251,34.966)
C5': (54.989,131.124,38.296)
O4': (56.364,130.882,36.336)
C8: (55.190,128.949,34.740)
O2': (56.372,133.652,34.880)
C6: (54.392,128.558,31.349)
C5: (54.786,128.852,32.660)
C4: (55.397,130.074,32.873)
P: (53.405,129.018,38.448)
C4': (55.649,131.840,37.157)
C2': (55.471,132.567,34.913)
C2: (55.254,130.620,30.748)
N1: (54.646,129.481,30.395)
N3: (55.665,131.012,31.947)
N6: (53.779,127.427,30.996)
N7: (54.668,128.148,33.846)
N9: (55.647,130.137,34.227)
O5': (53.849,130.405,37.810)
O3': (54.221,133.753,36.693)
OP1: (54.992,122.430,40.425)
OP2: (53.892,121.425,38.341)
C3': (54.053,126.551,37.848)
C1': (54.114,125.493,35.739)
C5': (55.735,124.764,38.564)
O4': (55.416,125.389,36.286)
C8: (53.811,122.975,35.666)
O2': (51.990,126.365,36.447)
C6: (52.769,122.227,32.415)
C5: (53.188,122.682,33.660)
C4: (53.387,124.044,33.800)
P: (54.952,122.260,38.951)
C4': (55.432,125.921,37.644)
C2': (53.170,125.739,36.906)
C2: (52.844,124.428,31.705)
N1: (52.612,123.139,31.430)
N3: (53.224,124.987,32.850)
N6: (52.511,120.947,32.158)
N7: (53.464,122.017,34.845)
N9: (53.788,124.226,35.100)
O5': (54.816,123.694,38.283)
O3': (54.064,127.924,37.476)
Image (generated by PyMOL):
PyMOL image
show in jmol