ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1835:A1834

Extra

PDB:
ATOM 1 O3' A A1834 100.733 -1.025 5.511 1.00115.36 O
ATOM 2 P A A1835 99.743 -0.934 4.249 1.00109.66 P
ATOM 3 OP1 A A1835 98.458 -1.531 4.667 1.00116.41 O
ATOM 4 OP2 A A1835 100.461 -1.519 3.093 1.00117.89 O
ATOM 5 O5' A A1835 99.571 0.634 4.042 1.00113.50 O
ATOM 6 C5' A A1835 98.279 1.219 3.940 1.00109.85 C
ATOM 7 C4' A A1835 98.259 2.641 4.456 1.00105.24 C
ATOM 8 O4' A A1835 98.645 2.666 5.863 1.00107.37 O
ATOM 9 C3' A A1835 99.231 3.611 3.798 1.00 98.78 C
ATOM 10 O3' A A1835 98.785 4.102 2.552 1.00 93.84 O
ATOM 11 C2' A A1835 99.373 4.682 4.863 1.00104.79 C
ATOM 12 O2' A A1835 98.196 5.475 4.933 1.00105.44 O
ATOM 13 C1' A A1835 99.448 3.806 6.117 1.00103.00 C
ATOM 14 N9 A A1835 100.834 3.349 6.354 1.00102.11 N
ATOM 15 C8 A A1835 101.329 2.062 6.412 1.00103.55 C
ATOM 16 N7 A A1835 102.633 1.985 6.577 1.00101.54 N
ATOM 17 C5 A A1835 103.033 3.317 6.613 1.00100.39 C
ATOM 18 C6 A A1835 104.293 3.933 6.771 1.00 98.99 C
ATOM 19 N6 A A1835 105.455 3.285 6.929 1.00 97.82 N
ATOM 20 N1 A A1835 104.324 5.282 6.759 1.00 99.59 N
ATOM 21 C2 A A1835 103.182 5.964 6.603 1.00 96.95 C
ATOM 22 N3 A A1835 101.947 5.504 6.449 1.00 94.26 N
ATOM 23 C4 A A1835 101.938 4.161 6.465 1.00 97.83 C
ATOM 24 P C A1836 99.618 3.768 1.221 1.00 98.94 P
ATOM 25 OP1 C A1836 98.935 4.445 0.083 1.00118.06 O
ATOM 26 OP2 C A1836 99.791 2.293 1.174 1.00113.70 O
ATOM 27 O5' C A1836 101.016 4.461 1.497 1.00106.02 O
TER

ATOM 1 O3' U B1833 102.092 -6.880 8.493 1.00113.79 O
ATOM 2 P A B1834 102.657 -6.597 7.011 1.00117.35 P
ATOM 3 OP1 A B1834 101.756 -7.307 6.061 1.00113.09 O
ATOM 4 OP2 A B1834 104.094 -6.941 7.019 1.00107.52 O
ATOM 5 O5' A B1834 102.480 -5.016 6.855 1.00110.26 O
ATOM 6 C5' A B1834 101.178 -4.432 6.796 1.00114.05 C
ATOM 7 C4' A B1834 101.215 -2.927 6.932 1.00106.62 C
ATOM 8 O4' A B1834 102.188 -2.568 7.938 1.00 96.30 O
ATOM 9 C3' A B1834 101.585 -2.160 5.663 1.00111.12 C
ATOM 10 O3' A B1834 100.733 -1.025 5.511 1.00115.36 O
ATOM 11 C2' A B1834 103.020 -1.704 5.912 1.00104.48 C
ATOM 12 O2' A B1834 103.354 -0.468 5.322 1.00104.98 O
ATOM 13 C1' A B1834 103.099 -1.625 7.427 1.00101.35 C
ATOM 14 N9 A B1834 104.417 -1.965 7.940 1.00112.13 N
ATOM 15 C8 A B1834 104.870 -3.206 8.308 1.00112.53 C
ATOM 16 N7 A B1834 106.112 -3.210 8.718 1.00111.09 N
ATOM 17 C5 A B1834 106.486 -1.882 8.599 1.00111.53 C
ATOM 18 C6 A B1834 107.684 -1.229 8.879 1.00112.97 C
ATOM 19 N6 A B1834 108.756 -1.871 9.352 1.00115.10 N
ATOM 20 N1 A B1834 107.729 0.101 8.647 1.00111.35 N
ATOM 21 C2 A B1834 106.642 0.721 8.174 1.00108.69 C
ATOM 22 N3 A B1834 105.456 0.215 7.865 1.00108.67 N
ATOM 23 C4 A B1834 105.456 -1.103 8.112 1.00111.77 C
ATOM 24 P A B1835 99.743 -0.934 4.249 1.00109.66 P
ATOM 25 OP1 A B1835 98.458 -1.531 4.667 1.00116.41 O
ATOM 26 OP2 A B1835 100.461 -1.519 3.093 1.00117.89 O
ATOM 27 O5' A B1835 99.571 0.634 4.042 1.00113.50 O
TER

Atoms:
OP1: (98.458,-1.531,4.667)
OP2: (100.461,-1.519,3.093)
C3': (99.231,3.611,3.798)
C1': (99.448,3.806,6.117)
C5': (98.279,1.219,3.940)
O4': (98.645,2.666,5.863)
C8: (101.329,2.062,6.412)
O2': (98.196,5.475,4.933)
C6: (104.293,3.933,6.771)
C5: (103.033,3.317,6.613)
C4: (101.938,4.161,6.465)
P: (99.743,-0.934,4.249)
C4': (98.259,2.641,4.456)
C2': (99.373,4.682,4.863)
C2: (103.182,5.964,6.603)
N1: (104.324,5.282,6.759)
N3: (101.947,5.504,6.449)
N6: (105.455,3.285,6.929)
N7: (102.633,1.985,6.577)
N9: (100.834,3.349,6.354)
O5': (99.571,0.634,4.042)
O3': (98.785,4.102,2.552)
OP1: (101.756,-7.307,6.061)
OP2: (104.094,-6.941,7.019)
C3': (101.585,-2.160,5.663)
C1': (103.099,-1.625,7.427)
C5': (101.178,-4.432,6.796)
O4': (102.188,-2.568,7.938)
C8: (104.870,-3.206,8.308)
O2': (103.354,-0.468,5.322)
C6: (107.684,-1.229,8.879)
C5: (106.486,-1.882,8.599)
C4: (105.456,-1.103,8.112)
P: (102.657,-6.597,7.011)
C4': (101.215,-2.927,6.932)
C2': (103.020,-1.704,5.912)
C2: (106.642,0.721,8.174)
N1: (107.729,0.101,8.647)
N3: (105.456,0.215,7.865)
N6: (108.756,-1.871,9.352)
N7: (106.112,-3.210,8.718)
N9: (104.417,-1.965,7.940)
O5': (102.480,-5.016,6.855)
O3': (100.733,-1.025,5.511)
Image (generated by PyMOL):
PyMOL image
show in jmol