Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1511:A1510
Extra
PDB:
ATOM 1 O3' A A1510 28.897 -20.933 -38.811 1.00 36.32 O
ATOM 2 P A A1511 27.783 -19.895 -39.317 1.00 40.50 P
ATOM 3 OP1 A A1511 28.442 -19.050 -40.344 1.00 36.13 O
ATOM 4 OP2 A A1511 27.166 -19.248 -38.121 1.00 37.74 O
ATOM 5 O5' A A1511 26.697 -20.830 -40.015 1.00 39.41 O
ATOM 6 C5' A A1511 27.016 -21.597 -41.170 1.00 39.81 C
ATOM 7 C4' A A1511 26.225 -22.885 -41.177 1.00 42.79 C
ATOM 8 O4' A A1511 26.633 -23.693 -40.041 1.00 41.76 O
ATOM 9 C3' A A1511 24.716 -22.758 -41.026 1.00 47.25 C
ATOM 10 O3' A A1511 24.059 -22.411 -42.254 1.00 48.01 O
ATOM 11 C2' A A1511 24.342 -24.119 -40.433 1.00 40.80 C
ATOM 12 O2' A A1511 24.308 -25.174 -41.367 1.00 40.88 O
ATOM 13 C1' A A1511 25.517 -24.372 -39.493 1.00 38.09 C
ATOM 14 N9 A A1511 25.260 -23.814 -38.162 1.00 42.27 N
ATOM 15 C8 A A1511 25.659 -22.589 -37.682 1.00 43.13 C
ATOM 16 N7 A A1511 25.265 -22.344 -36.463 1.00 43.67 N
ATOM 17 C5 A A1511 24.563 -23.477 -36.105 1.00 45.13 C
ATOM 18 C6 A A1511 23.878 -23.825 -34.938 1.00 45.49 C
ATOM 19 N6 A A1511 23.782 -23.027 -33.870 1.00 42.90 N
ATOM 20 N1 A A1511 23.280 -25.030 -34.900 1.00 47.82 N
ATOM 21 C2 A A1511 23.359 -25.816 -35.989 1.00 45.52 C
ATOM 22 N3 A A1511 23.959 -25.595 -37.151 1.00 39.06 N
ATOM 23 C4 A A1511 24.555 -24.396 -37.142 1.00 42.62 C
ATOM 24 P A A1512 22.583 -21.735 -42.224 1.00 44.32 P
ATOM 25 OP1 A A1512 22.339 -21.097 -43.552 1.00 35.72 O
ATOM 26 OP2 A A1512 22.428 -20.904 -40.992 1.00 42.25 O
ATOM 27 O5' A A1512 21.612 -23.005 -42.052 1.00 50.48 O
TER
ATOM 1 O3' A B1509 30.992 -18.926 -33.268 1.00 53.69 O
ATOM 2 P A B1510 29.681 -18.455 -34.062 1.00 52.60 P
ATOM 3 OP1 A B1510 30.063 -17.245 -34.845 1.00 50.42 O
ATOM 4 OP2 A B1510 28.589 -18.369 -33.057 1.00 43.97 O
ATOM 5 O5' A B1510 29.420 -19.655 -35.094 1.00 38.75 O
ATOM 6 C5' A B1510 30.387 -19.934 -36.108 1.00 34.81 C
ATOM 7 C4' A B1510 30.132 -21.270 -36.782 1.00 39.51 C
ATOM 8 O4' A B1510 30.218 -22.356 -35.830 1.00 47.34 O
ATOM 9 C3' A B1510 28.815 -21.474 -37.502 1.00 38.39 C
ATOM 10 O3' A B1510 28.897 -20.933 -38.811 1.00 36.32 O
ATOM 11 C2' A B1510 28.700 -22.993 -37.532 1.00 40.75 C
ATOM 12 O2' A B1510 29.482 -23.569 -38.562 1.00 41.85 O
ATOM 13 C1' A B1510 29.304 -23.368 -36.180 1.00 39.07 C
ATOM 14 N9 A B1510 28.327 -23.401 -35.106 1.00 39.00 N
ATOM 15 C8 A B1510 27.996 -22.342 -34.290 1.00 45.22 C
ATOM 16 N7 A B1510 27.163 -22.654 -33.338 1.00 46.42 N
ATOM 17 C5 A B1510 26.915 -23.999 -33.542 1.00 43.29 C
ATOM 18 C6 A B1510 26.151 -24.910 -32.849 1.00 44.76 C
ATOM 19 N6 A B1510 25.466 -24.589 -31.743 1.00 50.31 N
ATOM 20 N1 A B1510 26.107 -26.177 -33.311 1.00 41.02 N
ATOM 21 C2 A B1510 26.802 -26.482 -34.408 1.00 41.68 C
ATOM 22 N3 A B1510 27.572 -25.710 -35.147 1.00 45.45 N
ATOM 23 C4 A B1510 27.595 -24.463 -34.652 1.00 40.52 C
ATOM 24 P A B1511 27.783 -19.895 -39.317 1.00 40.50 P
ATOM 25 OP1 A B1511 28.442 -19.050 -40.344 1.00 36.13 O
ATOM 26 OP2 A B1511 27.166 -19.248 -38.121 1.00 37.74 O
ATOM 27 O5' A B1511 26.697 -20.830 -40.015 1.00 39.41 O
TER
ATOM 2 P A A1511 27.783 -19.895 -39.317 1.00 40.50 P
ATOM 3 OP1 A A1511 28.442 -19.050 -40.344 1.00 36.13 O
ATOM 4 OP2 A A1511 27.166 -19.248 -38.121 1.00 37.74 O
ATOM 5 O5' A A1511 26.697 -20.830 -40.015 1.00 39.41 O
ATOM 6 C5' A A1511 27.016 -21.597 -41.170 1.00 39.81 C
ATOM 7 C4' A A1511 26.225 -22.885 -41.177 1.00 42.79 C
ATOM 8 O4' A A1511 26.633 -23.693 -40.041 1.00 41.76 O
ATOM 9 C3' A A1511 24.716 -22.758 -41.026 1.00 47.25 C
ATOM 10 O3' A A1511 24.059 -22.411 -42.254 1.00 48.01 O
ATOM 11 C2' A A1511 24.342 -24.119 -40.433 1.00 40.80 C
ATOM 12 O2' A A1511 24.308 -25.174 -41.367 1.00 40.88 O
ATOM 13 C1' A A1511 25.517 -24.372 -39.493 1.00 38.09 C
ATOM 14 N9 A A1511 25.260 -23.814 -38.162 1.00 42.27 N
ATOM 15 C8 A A1511 25.659 -22.589 -37.682 1.00 43.13 C
ATOM 16 N7 A A1511 25.265 -22.344 -36.463 1.00 43.67 N
ATOM 17 C5 A A1511 24.563 -23.477 -36.105 1.00 45.13 C
ATOM 18 C6 A A1511 23.878 -23.825 -34.938 1.00 45.49 C
ATOM 19 N6 A A1511 23.782 -23.027 -33.870 1.00 42.90 N
ATOM 20 N1 A A1511 23.280 -25.030 -34.900 1.00 47.82 N
ATOM 21 C2 A A1511 23.359 -25.816 -35.989 1.00 45.52 C
ATOM 22 N3 A A1511 23.959 -25.595 -37.151 1.00 39.06 N
ATOM 23 C4 A A1511 24.555 -24.396 -37.142 1.00 42.62 C
ATOM 24 P A A1512 22.583 -21.735 -42.224 1.00 44.32 P
ATOM 25 OP1 A A1512 22.339 -21.097 -43.552 1.00 35.72 O
ATOM 26 OP2 A A1512 22.428 -20.904 -40.992 1.00 42.25 O
ATOM 27 O5' A A1512 21.612 -23.005 -42.052 1.00 50.48 O
TER
ATOM 1 O3' A B1509 30.992 -18.926 -33.268 1.00 53.69 O
ATOM 2 P A B1510 29.681 -18.455 -34.062 1.00 52.60 P
ATOM 3 OP1 A B1510 30.063 -17.245 -34.845 1.00 50.42 O
ATOM 4 OP2 A B1510 28.589 -18.369 -33.057 1.00 43.97 O
ATOM 5 O5' A B1510 29.420 -19.655 -35.094 1.00 38.75 O
ATOM 6 C5' A B1510 30.387 -19.934 -36.108 1.00 34.81 C
ATOM 7 C4' A B1510 30.132 -21.270 -36.782 1.00 39.51 C
ATOM 8 O4' A B1510 30.218 -22.356 -35.830 1.00 47.34 O
ATOM 9 C3' A B1510 28.815 -21.474 -37.502 1.00 38.39 C
ATOM 10 O3' A B1510 28.897 -20.933 -38.811 1.00 36.32 O
ATOM 11 C2' A B1510 28.700 -22.993 -37.532 1.00 40.75 C
ATOM 12 O2' A B1510 29.482 -23.569 -38.562 1.00 41.85 O
ATOM 13 C1' A B1510 29.304 -23.368 -36.180 1.00 39.07 C
ATOM 14 N9 A B1510 28.327 -23.401 -35.106 1.00 39.00 N
ATOM 15 C8 A B1510 27.996 -22.342 -34.290 1.00 45.22 C
ATOM 16 N7 A B1510 27.163 -22.654 -33.338 1.00 46.42 N
ATOM 17 C5 A B1510 26.915 -23.999 -33.542 1.00 43.29 C
ATOM 18 C6 A B1510 26.151 -24.910 -32.849 1.00 44.76 C
ATOM 19 N6 A B1510 25.466 -24.589 -31.743 1.00 50.31 N
ATOM 20 N1 A B1510 26.107 -26.177 -33.311 1.00 41.02 N
ATOM 21 C2 A B1510 26.802 -26.482 -34.408 1.00 41.68 C
ATOM 22 N3 A B1510 27.572 -25.710 -35.147 1.00 45.45 N
ATOM 23 C4 A B1510 27.595 -24.463 -34.652 1.00 40.52 C
ATOM 24 P A B1511 27.783 -19.895 -39.317 1.00 40.50 P
ATOM 25 OP1 A B1511 28.442 -19.050 -40.344 1.00 36.13 O
ATOM 26 OP2 A B1511 27.166 -19.248 -38.121 1.00 37.74 O
ATOM 27 O5' A B1511 26.697 -20.830 -40.015 1.00 39.41 O
TER
Atoms:
OP1: (28.442,-19.050,-40.344)
OP2: (27.166,-19.248,-38.121)
C3': (24.716,-22.758,-41.026)
C1': (25.517,-24.372,-39.493)
C5': (27.016,-21.597,-41.170)
O4': (26.633,-23.693,-40.041)
C8: (25.659,-22.589,-37.682)
O2': (24.308,-25.174,-41.367)
C6: (23.878,-23.825,-34.938)
C5: (24.563,-23.477,-36.105)
C4: (24.555,-24.396,-37.142)
P: (27.783,-19.895,-39.317)
C4': (26.225,-22.885,-41.177)
C2': (24.342,-24.119,-40.433)
C2: (23.359,-25.816,-35.989)
N1: (23.280,-25.030,-34.900)
N3: (23.959,-25.595,-37.151)
N6: (23.782,-23.027,-33.870)
N7: (25.265,-22.344,-36.463)
N9: (25.260,-23.814,-38.162)
O5': (26.697,-20.830,-40.015)
O3': (24.059,-22.411,-42.254)
OP2: (27.166,-19.248,-38.121)
C3': (24.716,-22.758,-41.026)
C1': (25.517,-24.372,-39.493)
C5': (27.016,-21.597,-41.170)
O4': (26.633,-23.693,-40.041)
C8: (25.659,-22.589,-37.682)
O2': (24.308,-25.174,-41.367)
C6: (23.878,-23.825,-34.938)
C5: (24.563,-23.477,-36.105)
C4: (24.555,-24.396,-37.142)
P: (27.783,-19.895,-39.317)
C4': (26.225,-22.885,-41.177)
C2': (24.342,-24.119,-40.433)
C2: (23.359,-25.816,-35.989)
N1: (23.280,-25.030,-34.900)
N3: (23.959,-25.595,-37.151)
N6: (23.782,-23.027,-33.870)
N7: (25.265,-22.344,-36.463)
N9: (25.260,-23.814,-38.162)
O5': (26.697,-20.830,-40.015)
O3': (24.059,-22.411,-42.254)
OP1: (30.063,-17.245,-34.845)
OP2: (28.589,-18.369,-33.057)
C3': (28.815,-21.474,-37.502)
C1': (29.304,-23.368,-36.180)
C5': (30.387,-19.934,-36.108)
O4': (30.218,-22.356,-35.830)
C8: (27.996,-22.342,-34.290)
O2': (29.482,-23.569,-38.562)
C6: (26.151,-24.910,-32.849)
C5: (26.915,-23.999,-33.542)
C4: (27.595,-24.463,-34.652)
P: (29.681,-18.455,-34.062)
C4': (30.132,-21.270,-36.782)
C2': (28.700,-22.993,-37.532)
C2: (26.802,-26.482,-34.408)
N1: (26.107,-26.177,-33.311)
N3: (27.572,-25.710,-35.147)
N6: (25.466,-24.589,-31.743)
N7: (27.163,-22.654,-33.338)
N9: (28.327,-23.401,-35.106)
O5': (29.420,-19.655,-35.094)
O3': (28.897,-20.933,-38.811)
OP2: (28.589,-18.369,-33.057)
C3': (28.815,-21.474,-37.502)
C1': (29.304,-23.368,-36.180)
C5': (30.387,-19.934,-36.108)
O4': (30.218,-22.356,-35.830)
C8: (27.996,-22.342,-34.290)
O2': (29.482,-23.569,-38.562)
C6: (26.151,-24.910,-32.849)
C5: (26.915,-23.999,-33.542)
C4: (27.595,-24.463,-34.652)
P: (29.681,-18.455,-34.062)
C4': (30.132,-21.270,-36.782)
C2': (28.700,-22.993,-37.532)
C2: (26.802,-26.482,-34.408)
N1: (26.107,-26.177,-33.311)
N3: (27.572,-25.710,-35.147)
N6: (25.466,-24.589,-31.743)
N7: (27.163,-22.654,-33.338)
N9: (28.327,-23.401,-35.106)
O5': (29.420,-19.655,-35.094)
O3': (28.897,-20.933,-38.811)
Image (generated by PyMOL):