Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3I56:01239:01237
Extra
PDB:
ATOM 1 O3' U A1238 12.317 95.279 66.262 1.00 92.59 O
ATOM 2 P A A1239 10.713 95.384 66.266 1.00 91.57 P
ATOM 3 OP1 A A1239 10.343 96.549 67.106 1.00 91.95 O
ATOM 4 OP2 A A1239 10.166 94.042 66.596 1.00 91.71 O
ATOM 5 O5' A A1239 10.338 95.743 64.762 1.00 88.78 O
ATOM 6 C5' A A1239 10.328 97.107 64.313 1.00 85.56 C
ATOM 7 C4' A A1239 8.910 97.551 64.048 1.00 83.84 C
ATOM 8 O4' A A1239 8.329 96.701 63.023 1.00 83.37 O
ATOM 9 C3' A A1239 7.960 97.423 65.226 1.00 82.15 C
ATOM 10 O3' A A1239 8.051 98.562 66.074 1.00 81.38 O
ATOM 11 C2' A A1239 6.603 97.307 64.541 1.00 81.92 C
ATOM 12 O2' A A1239 6.074 98.550 64.123 1.00 81.27 O
ATOM 13 C1' A A1239 6.960 96.467 63.312 1.00 81.38 C
ATOM 14 N9 A A1239 6.789 95.032 63.528 1.00 79.83 N
ATOM 15 C8 A A1239 7.774 94.097 63.722 1.00 79.73 C
ATOM 16 N7 A A1239 7.321 92.882 63.901 1.00 79.43 N
ATOM 17 C5 A A1239 5.946 93.026 63.822 1.00 78.54 C
ATOM 18 C6 A A1239 4.899 92.105 63.933 1.00 78.55 C
ATOM 19 N6 A A1239 5.085 90.804 64.166 1.00 78.19 N
ATOM 20 N1 A A1239 3.639 92.568 63.796 1.00 78.65 N
ATOM 21 C2 A A1239 3.459 93.874 63.565 1.00 78.81 C
ATOM 22 N3 A A1239 4.365 94.840 63.444 1.00 78.67 N
ATOM 23 C4 A A1239 5.604 94.344 63.585 1.00 78.74 C
ATOM 24 P C A1240 7.412 98.515 67.550 1.00 81.88 P
ATOM 25 OP1 C A1240 7.285 99.916 68.029 1.00 82.51 O
ATOM 26 OP2 C A1240 8.146 97.516 68.372 1.00 81.77 O
ATOM 27 O5' C A1240 5.934 97.977 67.318 1.00 79.42 O
TER
ATOM 1 O3' C B1236 10.242 87.244 58.909 1.00 48.79 O
ATOM 2 P A B1237 10.263 87.323 60.503 1.00 50.75 P
ATOM 3 OP1 A B1237 11.488 86.636 60.979 1.00 50.63 O
ATOM 4 OP2 A B1237 8.939 86.908 61.018 1.00 51.59 O
ATOM 5 O5' A B1237 10.418 88.876 60.793 1.00 54.66 O
ATOM 6 C5' A B1237 11.684 89.531 60.630 1.00 59.37 C
ATOM 7 C4' A B1237 11.569 90.972 61.037 1.00 62.07 C
ATOM 8 O4' A B1237 10.619 91.620 60.158 1.00 62.40 O
ATOM 9 C3' A B1237 11.004 91.204 62.427 1.00 64.77 C
ATOM 10 O3' A B1237 12.010 91.087 63.427 1.00 71.01 O
ATOM 11 C2' A B1237 10.450 92.616 62.311 1.00 63.98 C
ATOM 12 O2' A B1237 11.433 93.625 62.404 1.00 64.14 O
ATOM 13 C1' A B1237 9.900 92.598 60.884 1.00 63.54 C
ATOM 14 N9 A B1237 8.482 92.258 60.837 1.00 63.36 N
ATOM 15 C8 A B1237 7.884 91.043 61.052 1.00 63.03 C
ATOM 16 N7 A B1237 6.578 91.084 60.991 1.00 63.54 N
ATOM 17 C5 A B1237 6.298 92.412 60.703 1.00 64.23 C
ATOM 18 C6 A B1237 5.089 93.113 60.531 1.00 65.16 C
ATOM 19 N6 A B1237 3.881 92.550 60.630 1.00 65.87 N
ATOM 20 N1 A B1237 5.164 94.434 60.256 1.00 65.13 N
ATOM 21 C2 A B1237 6.372 95.001 60.169 1.00 64.60 C
ATOM 22 N3 A B1237 7.573 94.452 60.319 1.00 64.12 N
ATOM 23 C4 A B1237 7.464 93.141 60.590 1.00 63.77 C
ATOM 24 P U B1238 11.705 90.282 64.789 1.00 75.98 P
ATOM 25 OP1 U B1238 12.028 88.851 64.553 1.00 75.09 O
ATOM 26 OP2 U B1238 10.354 90.656 65.281 1.00 76.44 O
ATOM 27 O5' U B1238 12.793 90.859 65.806 1.00 81.60 O
TER
ATOM 2 P A A1239 10.713 95.384 66.266 1.00 91.57 P
ATOM 3 OP1 A A1239 10.343 96.549 67.106 1.00 91.95 O
ATOM 4 OP2 A A1239 10.166 94.042 66.596 1.00 91.71 O
ATOM 5 O5' A A1239 10.338 95.743 64.762 1.00 88.78 O
ATOM 6 C5' A A1239 10.328 97.107 64.313 1.00 85.56 C
ATOM 7 C4' A A1239 8.910 97.551 64.048 1.00 83.84 C
ATOM 8 O4' A A1239 8.329 96.701 63.023 1.00 83.37 O
ATOM 9 C3' A A1239 7.960 97.423 65.226 1.00 82.15 C
ATOM 10 O3' A A1239 8.051 98.562 66.074 1.00 81.38 O
ATOM 11 C2' A A1239 6.603 97.307 64.541 1.00 81.92 C
ATOM 12 O2' A A1239 6.074 98.550 64.123 1.00 81.27 O
ATOM 13 C1' A A1239 6.960 96.467 63.312 1.00 81.38 C
ATOM 14 N9 A A1239 6.789 95.032 63.528 1.00 79.83 N
ATOM 15 C8 A A1239 7.774 94.097 63.722 1.00 79.73 C
ATOM 16 N7 A A1239 7.321 92.882 63.901 1.00 79.43 N
ATOM 17 C5 A A1239 5.946 93.026 63.822 1.00 78.54 C
ATOM 18 C6 A A1239 4.899 92.105 63.933 1.00 78.55 C
ATOM 19 N6 A A1239 5.085 90.804 64.166 1.00 78.19 N
ATOM 20 N1 A A1239 3.639 92.568 63.796 1.00 78.65 N
ATOM 21 C2 A A1239 3.459 93.874 63.565 1.00 78.81 C
ATOM 22 N3 A A1239 4.365 94.840 63.444 1.00 78.67 N
ATOM 23 C4 A A1239 5.604 94.344 63.585 1.00 78.74 C
ATOM 24 P C A1240 7.412 98.515 67.550 1.00 81.88 P
ATOM 25 OP1 C A1240 7.285 99.916 68.029 1.00 82.51 O
ATOM 26 OP2 C A1240 8.146 97.516 68.372 1.00 81.77 O
ATOM 27 O5' C A1240 5.934 97.977 67.318 1.00 79.42 O
TER
ATOM 1 O3' C B1236 10.242 87.244 58.909 1.00 48.79 O
ATOM 2 P A B1237 10.263 87.323 60.503 1.00 50.75 P
ATOM 3 OP1 A B1237 11.488 86.636 60.979 1.00 50.63 O
ATOM 4 OP2 A B1237 8.939 86.908 61.018 1.00 51.59 O
ATOM 5 O5' A B1237 10.418 88.876 60.793 1.00 54.66 O
ATOM 6 C5' A B1237 11.684 89.531 60.630 1.00 59.37 C
ATOM 7 C4' A B1237 11.569 90.972 61.037 1.00 62.07 C
ATOM 8 O4' A B1237 10.619 91.620 60.158 1.00 62.40 O
ATOM 9 C3' A B1237 11.004 91.204 62.427 1.00 64.77 C
ATOM 10 O3' A B1237 12.010 91.087 63.427 1.00 71.01 O
ATOM 11 C2' A B1237 10.450 92.616 62.311 1.00 63.98 C
ATOM 12 O2' A B1237 11.433 93.625 62.404 1.00 64.14 O
ATOM 13 C1' A B1237 9.900 92.598 60.884 1.00 63.54 C
ATOM 14 N9 A B1237 8.482 92.258 60.837 1.00 63.36 N
ATOM 15 C8 A B1237 7.884 91.043 61.052 1.00 63.03 C
ATOM 16 N7 A B1237 6.578 91.084 60.991 1.00 63.54 N
ATOM 17 C5 A B1237 6.298 92.412 60.703 1.00 64.23 C
ATOM 18 C6 A B1237 5.089 93.113 60.531 1.00 65.16 C
ATOM 19 N6 A B1237 3.881 92.550 60.630 1.00 65.87 N
ATOM 20 N1 A B1237 5.164 94.434 60.256 1.00 65.13 N
ATOM 21 C2 A B1237 6.372 95.001 60.169 1.00 64.60 C
ATOM 22 N3 A B1237 7.573 94.452 60.319 1.00 64.12 N
ATOM 23 C4 A B1237 7.464 93.141 60.590 1.00 63.77 C
ATOM 24 P U B1238 11.705 90.282 64.789 1.00 75.98 P
ATOM 25 OP1 U B1238 12.028 88.851 64.553 1.00 75.09 O
ATOM 26 OP2 U B1238 10.354 90.656 65.281 1.00 76.44 O
ATOM 27 O5' U B1238 12.793 90.859 65.806 1.00 81.60 O
TER
Atoms:
OP1: (10.343,96.549,67.106)
OP2: (10.166,94.042,66.596)
C3': (7.960,97.423,65.226)
C1': (6.960,96.467,63.312)
C5': (10.328,97.107,64.313)
O4': (8.329,96.701,63.023)
C8: (7.774,94.097,63.722)
O2': (6.074,98.550,64.123)
C6: (4.899,92.105,63.933)
C5: (5.946,93.026,63.822)
C4: (5.604,94.344,63.585)
P: (10.713,95.384,66.266)
C4': (8.910,97.551,64.048)
C2': (6.603,97.307,64.541)
C2: (3.459,93.874,63.565)
N1: (3.639,92.568,63.796)
N3: (4.365,94.840,63.444)
N6: (5.085,90.804,64.166)
N7: (7.321,92.882,63.901)
N9: (6.789,95.032,63.528)
O5': (10.338,95.743,64.762)
O3': (8.051,98.562,66.074)
OP2: (10.166,94.042,66.596)
C3': (7.960,97.423,65.226)
C1': (6.960,96.467,63.312)
C5': (10.328,97.107,64.313)
O4': (8.329,96.701,63.023)
C8: (7.774,94.097,63.722)
O2': (6.074,98.550,64.123)
C6: (4.899,92.105,63.933)
C5: (5.946,93.026,63.822)
C4: (5.604,94.344,63.585)
P: (10.713,95.384,66.266)
C4': (8.910,97.551,64.048)
C2': (6.603,97.307,64.541)
C2: (3.459,93.874,63.565)
N1: (3.639,92.568,63.796)
N3: (4.365,94.840,63.444)
N6: (5.085,90.804,64.166)
N7: (7.321,92.882,63.901)
N9: (6.789,95.032,63.528)
O5': (10.338,95.743,64.762)
O3': (8.051,98.562,66.074)
OP1: (11.488,86.636,60.979)
OP2: (8.939,86.908,61.018)
C3': (11.004,91.204,62.427)
C1': (9.900,92.598,60.884)
C5': (11.684,89.531,60.630)
O4': (10.619,91.620,60.158)
C8: (7.884,91.043,61.052)
O2': (11.433,93.625,62.404)
C6: (5.089,93.113,60.531)
C5: (6.298,92.412,60.703)
C4: (7.464,93.141,60.590)
P: (10.263,87.323,60.503)
C4': (11.569,90.972,61.037)
C2': (10.450,92.616,62.311)
C2: (6.372,95.001,60.169)
N1: (5.164,94.434,60.256)
N3: (7.573,94.452,60.319)
N6: (3.881,92.550,60.630)
N7: (6.578,91.084,60.991)
N9: (8.482,92.258,60.837)
O5': (10.418,88.876,60.793)
O3': (12.010,91.087,63.427)
OP2: (8.939,86.908,61.018)
C3': (11.004,91.204,62.427)
C1': (9.900,92.598,60.884)
C5': (11.684,89.531,60.630)
O4': (10.619,91.620,60.158)
C8: (7.884,91.043,61.052)
O2': (11.433,93.625,62.404)
C6: (5.089,93.113,60.531)
C5: (6.298,92.412,60.703)
C4: (7.464,93.141,60.590)
P: (10.263,87.323,60.503)
C4': (11.569,90.972,61.037)
C2': (10.450,92.616,62.311)
C2: (6.372,95.001,60.169)
N1: (5.164,94.434,60.256)
N3: (7.573,94.452,60.319)
N6: (3.881,92.550,60.630)
N7: (6.578,91.084,60.991)
N9: (8.482,92.258,60.837)
O5': (10.418,88.876,60.793)
O3': (12.010,91.087,63.427)
Image (generated by PyMOL):