ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OE8:B9:B8

Extra

PDB:
ATOM 1 O3' A A 8 15.250 7.819 38.846 1.00 27.13 O
ATOM 2 P A A 9 16.359 6.927 38.123 1.00 32.77 P
ATOM 3 OP1 A A 9 17.190 7.884 37.337 1.00 31.89 O
ATOM 4 OP2 A A 9 15.679 5.783 37.475 1.00 31.73 O
ATOM 5 O5' A A 9 17.280 6.347 39.328 1.00 29.20 O
ATOM 6 C5' A A 9 18.258 7.176 39.965 1.00 29.92 C
ATOM 7 C4' A A 9 19.025 6.366 40.982 1.00 29.02 C
ATOM 8 O4' A A 9 18.193 6.040 42.114 1.00 29.79 O
ATOM 9 C3' A A 9 19.458 5.042 40.404 1.00 31.02 C
ATOM 10 O3' A A 9 20.750 5.178 39.842 1.00 30.45 O
ATOM 11 C2' A A 9 19.456 4.131 41.617 1.00 30.20 C
ATOM 12 O2' A A 9 20.628 4.282 42.390 1.00 32.35 O
ATOM 13 C1' A A 9 18.228 4.640 42.370 1.00 29.62 C
ATOM 14 N9 A A 9 16.985 4.049 41.854 1.00 28.01 N
ATOM 15 C8 A A 9 15.872 4.742 41.478 1.00 28.30 C
ATOM 16 N7 A A 9 14.903 3.992 41.040 1.00 29.41 N
ATOM 17 C5 A A 9 15.410 2.701 41.133 1.00 26.92 C
ATOM 18 C6 A A 9 14.868 1.434 40.807 1.00 29.44 C
ATOM 19 N6 A A 9 13.625 1.267 40.309 1.00 31.29 N
ATOM 20 N1 A A 9 15.639 0.342 41.039 1.00 26.98 N
ATOM 21 C2 A A 9 16.873 0.527 41.528 1.00 25.65 C
ATOM 22 N3 A A 9 17.486 1.653 41.852 1.00 25.36 N
ATOM 23 C4 A A 9 16.693 2.721 41.624 1.00 28.04 C
ATOM 24 P A A 10 21.120 4.278 38.577 1.00 30.39 P
ATOM 25 OP1 A A 10 20.084 4.430 37.569 1.00 32.72 O
ATOM 26 OP2 A A 10 21.559 2.912 39.036 1.00 28.48 O
ATOM 27 O5' A A 10 22.429 5.040 38.072 1.00 32.74 O
TER

ATOM 1 O3' A B 7 10.088 4.275 40.536 1.00 29.95 O
ATOM 2 P A B 8 10.753 4.382 39.086 1.00 29.99 P
ATOM 3 OP1 A B 8 9.635 4.560 38.113 1.00 28.60 O
ATOM 4 OP2 A B 8 11.671 3.245 38.899 1.00 28.86 O
ATOM 5 O5' A B 8 11.610 5.743 39.211 1.00 29.42 O
ATOM 6 C5' A B 8 11.861 6.628 38.109 1.00 32.30 C
ATOM 7 C4' A B 8 12.893 7.709 38.433 1.00 30.05 C
ATOM 8 O4' A B 8 12.275 8.874 39.065 1.00 28.25 O
ATOM 9 C3' A B 8 14.025 7.317 39.378 1.00 28.24 C
ATOM 10 O3' A B 8 15.250 7.819 38.846 1.00 27.13 O
ATOM 11 C2' A B 8 13.732 8.132 40.642 1.00 31.44 C
ATOM 12 O2' A B 8 14.929 8.425 41.320 1.00 33.60 O
ATOM 13 C1' A B 8 13.139 9.419 40.053 1.00 29.96 C
ATOM 14 N9 A B 8 12.350 10.394 40.859 1.00 32.00 N
ATOM 15 C8 A B 8 12.313 11.753 40.653 1.00 31.27 C
ATOM 16 N7 A B 8 11.499 12.427 41.461 1.00 28.31 N
ATOM 17 C5 A B 8 10.956 11.410 42.253 1.00 33.24 C
ATOM 18 C6 A B 8 10.024 11.444 43.320 1.00 34.64 C
ATOM 19 N6 A B 8 9.421 12.573 43.763 1.00 30.67 N
ATOM 20 N1 A B 8 9.697 10.272 43.903 1.00 36.31 N
ATOM 21 C2 A B 8 10.277 9.143 43.464 1.00 39.13 C
ATOM 22 N3 A B 8 11.163 8.991 42.468 1.00 37.13 N
ATOM 23 C4 A B 8 11.471 10.169 41.900 1.00 31.91 C
ATOM 24 P A B 9 16.359 6.927 38.123 1.00 32.77 P
ATOM 25 OP1 A B 9 17.190 7.884 37.337 1.00 31.89 O
ATOM 26 OP2 A B 9 15.679 5.783 37.475 1.00 31.73 O
ATOM 27 O5' A B 9 17.280 6.347 39.328 1.00 29.20 O
TER

Atoms:
OP1: (17.190,7.884,37.337)
OP2: (15.679,5.783,37.475)
C3': (19.458,5.042,40.404)
C1': (18.228,4.640,42.370)
C5': (18.258,7.176,39.965)
O4': (18.193,6.040,42.114)
C8: (15.872,4.742,41.478)
O2': (20.628,4.282,42.390)
C6: (14.868,1.434,40.807)
C5: (15.410,2.701,41.133)
C4: (16.693,2.721,41.624)
P: (16.359,6.927,38.123)
C4': (19.025,6.366,40.982)
C2': (19.456,4.131,41.617)
C2: (16.873,0.527,41.528)
N1: (15.639,0.342,41.039)
N3: (17.486,1.653,41.852)
N6: (13.625,1.267,40.309)
N7: (14.903,3.992,41.040)
N9: (16.985,4.049,41.854)
O5': (17.280,6.347,39.328)
O3': (20.750,5.178,39.842)
OP1: (9.635,4.560,38.113)
OP2: (11.671,3.245,38.899)
C3': (14.025,7.317,39.378)
C1': (13.139,9.419,40.053)
C5': (11.861,6.628,38.109)
O4': (12.275,8.874,39.065)
C8: (12.313,11.753,40.653)
O2': (14.929,8.425,41.320)
C6: (10.024,11.444,43.320)
C5: (10.956,11.410,42.253)
C4: (11.471,10.169,41.900)
P: (10.753,4.382,39.086)
C4': (12.893,7.709,38.433)
C2': (13.732,8.132,40.642)
C2: (10.277,9.143,43.464)
N1: (9.697,10.272,43.903)
N3: (11.163,8.991,42.468)
N6: (9.421,12.573,43.763)
N7: (11.499,12.427,41.461)
N9: (12.350,10.394,40.859)
O5': (11.610,5.743,39.211)
O3': (15.250,7.819,38.846)
Image (generated by PyMOL):
PyMOL image
show in jmol